Basic Information

Insect: Philopedon plagiatum
Gene Symbol: -
Assembly: GCA_963971165.1
Location: OZ020189.1:36730584-36749033[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.064 13 8.9 4.0 1 20 862 881 862 883 0.95

2 14 2.9e-05 0.0055 19.4 4.9 1 23 973 995 973 995 0.98

3 14 2.3e-05 0.0044 19.8 0.3 1 23 1001 1023 1001 1023 0.96

4 14 2.6e-05 0.0051 19.6 0.8 1 23 1029 1051 1029 1051 0.98

5 14 4.7e-06 0.00092 21.9 2.3 1 23 1057 1079 1057 1079 0.99

6 14 7.5e-06 0.0015 21.3 1.8 1 23 1085 1107 1085 1107 0.98

7 14 0.0036 0.71 12.8 2.8 3 22 1115 1134 1113 1135 0.91

8 14 1.6e-06 0.0003 23.4 2.3 1 23 1158 1180 1158 1180 0.99

9 14 3.7e-05 0.0071 19.1 1.3 1 23 1186 1208 1186 1208 0.96

10 14 0.0012 0.23 14.3 0.2 1 23 1214 1236 1214 1236 0.98

11 14 4e-07 7.7e-05 25.3 1.6 1 23 1242 1264 1242 1264 0.99

12 14 3.1e-05 0.0061 19.3 1.6 1 23 1270 1292 1270 1292 0.99

13 14 0.0021 0.42 13.5 4.1 1 23 1298 1320 1298 1320 0.98

14 14 0.00046 0.09 15.6 5.9 1 23 1326 1349 1326 1349 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.064	13	8.9	4.0	1	20	862	881	862	883	0.95
2	14	2.9e-05	0.0055	19.4	4.9	1	23	973	995	973	995	0.98
3	14	2.3e-05	0.0044	19.8	0.3	1	23	1001	1023	1001	1023	0.96
4	14	2.6e-05	0.0051	19.6	0.8	1	23	1029	1051	1029	1051	0.98
5	14	4.7e-06	0.00092	21.9	2.3	1	23	1057	1079	1057	1079	0.99
6	14	7.5e-06	0.0015	21.3	1.8	1	23	1085	1107	1085	1107	0.98
7	14	0.0036	0.71	12.8	2.8	3	22	1115	1134	1113	1135	0.91
8	14	1.6e-06	0.0003	23.4	2.3	1	23	1158	1180	1158	1180	0.99
9	14	3.7e-05	0.0071	19.1	1.3	1	23	1186	1208	1186	1208	0.96
10	14	0.0012	0.23	14.3	0.2	1	23	1214	1236	1214	1236	0.98
11	14	4e-07	7.7e-05	25.3	1.6	1	23	1242	1264	1242	1264	0.99
12	14	3.1e-05	0.0061	19.3	1.6	1	23	1270	1292	1270	1292	0.99
13	14	0.0021	0.42	13.5	4.1	1	23	1298	1320	1298	1320	0.98
14	14	0.00046	0.09	15.6	5.9	1	23	1326	1349	1326	1349	0.98

Sequence Information

Coding Sequence: ATGTGTAATGTTCTTACTGAGAATTATGATGTAATACTGTTAACTGAGACATTCTTGGATAACACTGTTTTGTCAGGTGAACTTGGCCTTGATGGTTATTGTGTATTTAGATGTGACAGATCGGAATCGACTAGTAATTGTGTGACTCAGGGTGGAGTGCTTATTGCTGTGAAGAGTACACTACAATGTCGTCTTCTTGTTCCAATATTAAATAGTGTGGAGCAAATTTTTGTCCTGATCACTGTTGGTGCAAATAGAATTCTGATTGGTACTGTATATATACCTGGTGTCTCAACTGTAGAAGTGTATGAAAGTTTCTGTCTCTCTGTTATGCAAGTGTGTGATGAGACTGACTTTACTGATGTGCTACTTTGGGGTGATTTCAACTTACCCAAAATGTCTTGGATCTATGATGAAAATGGATCTTCTCCTACCGGAAATGTATCAGGTGAGGCTACAGTGATATCGGACTGCGCAGCCTATTTAGGCTTGTTTCAAAATATAACCATTCCAAATAAGTATGGAAATTTTTTGGATTTACTGTTTTCAAATCATATAGATACACATGTCACAATTTGTGATAAACCTTTAGTGCGACTAGATGCACCCCATCCAGCTTTTGAATGTAACTTTAAATTAGGAAGTCCCATACCAAATAATATCTCATGTGATAATTTTTACTATGATTTTAAGCATGCTGACTACGCTGAAATTAATTTGTTACTAGCTAGTGTTGACTGGAGCTTCATTTCTGAGTGTACTGATGTGGATTTTGTTGTTTCtcaattttataatattctgtATTTTGCAATTGAACTATTTACACCTATTTCGCAATATAAAACACCAAAGTTTCCGAAATGGATGAGTTCCGACTTGAAAGCctcaattataaataaaaaagaagctcatacaaattttaaacaatcaGGGACATTACATGATTACAATATCTTTTCAAACCTGAGAACGCAATGTAGAAATATGTCTTATTCCGTTCACCATGAACATGTGGCAATGGTTGAGGCGCAGCTGACTGATAGAGCTTCCTTTTGGAAGTTTGTAAACTCAAAAAAAGGAAACACTGAATATCCACAGTGTATGTCTCTTAATCATAATCTAAGTAGTGATCCACATGAGATTTCAGAAATGTTTAATGAGCATTTCTCCTCGGTATACTTGGAACATGAGGAATCCAAAGTCTTTTTTGATTGTGATAGGTCTGTTAGTGTAGGATTTTTAAACTTGTCTGTGATTGATGTTTTTAATAGGATTAGTATATTGAAATCTAGTCTTGGACCAGGGCCTGATGGcatacctgttattttattacaaaattgtaaatttgtcctagctgatattttatgtaaaatttataaCCTATCACTTAGATGCGGGATTTTTCCAACTTATTGGAAGAAGTCATATGTTACACCAGTTTTTAAGGATGGTAATCGGGCAGATATGAAAAATTATAGAGCCATCTCTAAGATGtgtttagcttcaaaaatatttgaagcctTGGTTTCAGATAGTATAACTCCACTTTTTAGACAGGTGATGATTAGTGAACAGCACGGCTTTATAAAGGGGAGATCAACTGTTTCAAACCTGTTATGCTATGAGCAGATACTGTTGGGAGCTTTCGAGAGTGGGTATCAGGTCGATACCATTTATACCGACTTCTCGAAGGCCTTTGATAGTGTTGATCATggcatattaattaaaaagctCTCAGCAGTTGGAATTTATGGAACTCTGCTCAACTGGTTTGAAAGCAATCTAAAAGGGAGAAAACAAGctgttaaaattaaacattacaTATCTTCAGAGATATCTGTTACTTCTGGCGTCCCGCAGGGTGGTCACCTGTCGTCagttctttttaatatatttatcaaTGATATAAAAACTGCTTTTCATGACTGCCAGTTTCTGGTTTTCGCTGATgacttaaaaattttcaaaattattaaatcccCATCTGATTGTCAATTATTGCAAGACGATCTGAATAGATTTTCATTATggtctaaaagtaataaattgtcTCTAAATATCAGCAAATGCAGAATAGTGTCATTCACTACATCCAGGAATCCTTATTTCTTTAAGTATGACCTGGACTCTGTGGAGCTTGAAAGACAAACCCAGGTTAAAGATCTTGGAGTTTGGCTAGACTATGAGCTTACATTTACTAAGCATATTGATTTCATTACGACTAAGGCAATGCGCCTACTGGGATTTGTCTTTCGAACTCTACGAGGTTTCGAGAGTGTATTTGCCTTTAAAGAGGTTTACTGTACTGTAATTCGTTCTATACTTGAATATGCCAGTTGTGTGTGGCAACCATACTATGCTGTTTACAAGCAAAGGTTGGAAAGGGTCCAGAGAAGGTTCCTTAGAAGGATTGGATCTAAATCGGGCATACCCTATGATGAGATTGATtTGGCTGATCATCCTGTAAGTTTAGTCCAGTGTTGTTATGAAAACATGTTTATTTCTTTGCAGACTGATCATGATAACAAAGATAAAAGAAAAGGCAAAGTTTCCAAAAAAGGCAGAACTTTAAAACCCCTTAAATATACGTGTGAAGTTTGTAGCAAGTCATAcaaatttcagaaaaacatATTAAGGCATAAGTGCTTTAAATCTGAAGAAGTCACAAGGGAAACACCAAGTGCGACAAAAAGACCTGGTAGGCCTGGATTACGTGAACGAAAGCCAAGTAATACTGCAAATGGAATTTCTGACAATGTGGATGTAAATAAAGATCTTCCTGGAGACAGAACAGCTTTAGATGAAATAGTTGAAAATAAGGCAGATAACGGTTCTGATGATAATTATTCTGATCAGgGCGATTTTAATGATGATTTTTCGAACAATGACTCCTCGGATGACGATTTTAAACTGGAACACAAATGCAAAATATGTGGAAAatcctttaaatttaaaagtttactGGACTCTCACAAACAGACCCATTCAGAAGATAGGCCTTTCTTGTGTAATGTATGTGGAAAGGGATATGCTGATAAGTATGGTCTTAAAAGTCATTTAAATACTCATTcagatgaTCGACCGTATATGTGCAAATTTTGTGGCACACGCTTTAGGACACAAGGAGCCGTTCGAGTTCATGTTAGGACACACACAGGAGAACGACCGTATAAATGTCAACATTGTTTCAAAACGTTTGCTCAAGCAGCTAATTTGCAACAGCATGAAAGAGTGCATACTGGAGAAAAGCCATATGAATGTGCACTTTGTGGAAAGAAgttTAATCACAGCggcaaattaaaaatacatctCAGATCACATAGTGGCGAGAAACCTTATGGTTGTTCCTTCTGTGACAAATGTTTTGCAACAAAAGAAACAATGAAGAAACATATATGGACGCATACAGGAGAACGACCGCCTAATTATAAAccaaaACCAAGAGGAGACACTAGTCATATAATCCCCAGTTATGAGTGTGATGTGTGTCATAAAATGTTCAAGTTTCCTGCCAATCTAAAAGCACACAGACGTAGACATACCAATGATAAACCTTTCCTGTGCAGTACTTGTGGAAAAGCATTCTCAGAAAAGCACGGTCTTAATGTTCATCTAAATACTCACACGgGAGAAAAACCTTTCGAATGTATGATTTGTACCGCCAAATTTACAGCACCAACTGCGCTTAGGGTACATTTAAGACGCCACACGGGAGAGAAGCCGTATAAATGTGATATTTGTAATAAGAGCTTTTTCCAACCGAGTAATTTGATAAGTCACAAGCGTTCACATACAGGAGAGAAGCCATATGAATGTACCTTATGCTCAAAGAAGTTTTCTGCTAGCAATAAGTTAAAAATCCATATGCGAATGCACAGCGGTGAAAAACCATACAATTGTCCACATTGCAATGAAAGCTTTGCTCGAAAAGATGTTCTAACGTGCCATTTAAGAAGGCATACTGGAGAAAAGCCGTACACATGCAAAATATGTCACCAGTCTTATTCACATAGTGGGACTCTATATACCCATCTAAAAACTCAGCATAAAAATAAGGGTCATGACCTATCAGCATTGGAATTTTAG
Protein Sequence: MCNVLTENYDVILLTETFLDNTVLSGELGLDGYCVFRCDRSESTSNCVTQGGVLIAVKSTLQCRLLVPILNSVEQIFVLITVGANRILIGTVYIPGVSTVEVYESFCLSVMQVCDETDFTDVLLWGDFNLPKMSWIYDENGSSPTGNVSGEATVISDCAAYLGLFQNITIPNKYGNFLDLLFSNHIDTHVTICDKPLVRLDAPHPAFECNFKLGSPIPNNISCDNFYYDFKHADYAEINLLLASVDWSFISECTDVDFVVSQFYNILYFAIELFTPISQYKTPKFPKWMSSDLKASIINKKEAHTNFKQSGTLHDYNIFSNLRTQCRNMSYSVHHEHVAMVEAQLTDRASFWKFVNSKKGNTEYPQCMSLNHNLSSDPHEISEMFNEHFSSVYLEHEESKVFFDCDRSVSVGFLNLSVIDVFNRISILKSSLGPGPDGIPVILLQNCKFVLADILCKIYNLSLRCGIFPTYWKKSYVTPVFKDGNRADMKNYRAISKMCLASKIFEALVSDSITPLFRQVMISEQHGFIKGRSTVSNLLCYEQILLGAFESGYQVDTIYTDFSKAFDSVDHGILIKKLSAVGIYGTLLNWFESNLKGRKQAVKIKHYISSEISVTSGVPQGGHLSSVLFNIFINDIKTAFHDCQFLVFADDLKIFKIIKSPSDCQLLQDDLNRFSLWSKSNKLSLNISKCRIVSFTTSRNPYFFKYDLDSVELERQTQVKDLGVWLDYELTFTKHIDFITTKAMRLLGFVFRTLRGFESVFAFKEVYCTVIRSILEYASCVWQPYYAVYKQRLERVQRRFLRRIGSKSGIPYDEIDLADHPVSLVQCCYENMFISLQTDHDNKDKRKGKVSKKGRTLKPLKYTCEVCSKSYKFQKNILRHKCFKSEEVTRETPSATKRPGRPGLRERKPSNTANGISDNVDVNKDLPGDRTALDEIVENKADNGSDDNYSDQGDFNDDFSNNDSSDDDFKLEHKCKICGKSFKFKSLLDSHKQTHSEDRPFLCNVCGKGYADKYGLKSHLNTHSDDRPYMCKFCGTRFRTQGAVRVHVRTHTGERPYKCQHCFKTFAQAANLQQHERVHTGEKPYECALCGKKFNHSGKLKIHLRSHSGEKPYGCSFCDKCFATKETMKKHIWTHTGERPPNYKPKPRGDTSHIIPSYECDVCHKMFKFPANLKAHRRRHTNDKPFLCSTCGKAFSEKHGLNVHLNTHTGEKPFECMICTAKFTAPTALRVHLRRHTGEKPYKCDICNKSFFQPSNLISHKRSHTGEKPYECTLCSKKFSASNKLKIHMRMHSGEKPYNCPHCNESFARKDVLTCHLRRHTGEKPYTCKICHQSYSHSGTLYTHLKTQHKNKGHDLSALEF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -