Basic Information

Insect: Philopedon plagiatum
Gene Symbol: -
Assembly: GCA_963971165.1
Location: OZ020196.1:38323571-38350746[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.0053 1 12.3 4.0 1 23 410 432 410 432 0.98

2 18 0.0013 0.24 14.3 2.5 1 20 438 457 438 460 0.94

3 18 2.4e-05 0.0046 19.7 1.5 1 23 466 488 466 488 0.98

4 18 6.8e-06 0.0013 21.4 4.1 1 21 494 514 494 516 0.95

5 18 2.4e-05 0.0046 19.7 4.7 1 23 522 544 522 544 0.99

6 18 4.8e-05 0.0094 18.7 5.3 1 23 550 572 550 572 0.97

7 18 8.4e-06 0.0016 21.1 7.5 1 23 578 600 578 600 0.97

8 18 2.7e-07 5.1e-05 25.8 1.9 1 23 606 628 606 628 0.98

9 18 0.00014 0.027 17.3 6.7 1 23 634 656 634 656 0.97

10 18 5.3e-05 0.01 18.6 7.0 1 23 662 684 662 684 0.98

11 18 9.9e-07 0.00019 24.0 3.3 1 23 690 712 690 712 0.98

12 18 3.9e-06 0.00076 22.2 7.8 1 23 718 740 718 740 0.98

13 18 9.4e-05 0.018 17.8 8.2 1 23 746 768 746 768 0.98

14 18 3.2e-05 0.0063 19.3 7.7 1 23 774 796 774 796 0.98

15 18 0.00018 0.035 16.9 6.9 1 23 802 824 802 824 0.97

16 18 7.3e-05 0.014 18.2 0.8 1 23 830 852 830 852 0.98

17 18 0.17 33 7.6 5.0 1 23 862 884 862 884 0.98

18 18 1.7e-06 0.00032 23.3 1.0 1 23 890 912 890 912 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.0053	1	12.3	4.0	1	23	410	432	410	432	0.98
2	18	0.0013	0.24	14.3	2.5	1	20	438	457	438	460	0.94
3	18	2.4e-05	0.0046	19.7	1.5	1	23	466	488	466	488	0.98
4	18	6.8e-06	0.0013	21.4	4.1	1	21	494	514	494	516	0.95
5	18	2.4e-05	0.0046	19.7	4.7	1	23	522	544	522	544	0.99
6	18	4.8e-05	0.0094	18.7	5.3	1	23	550	572	550	572	0.97
7	18	8.4e-06	0.0016	21.1	7.5	1	23	578	600	578	600	0.97
8	18	2.7e-07	5.1e-05	25.8	1.9	1	23	606	628	606	628	0.98
9	18	0.00014	0.027	17.3	6.7	1	23	634	656	634	656	0.97
10	18	5.3e-05	0.01	18.6	7.0	1	23	662	684	662	684	0.98
11	18	9.9e-07	0.00019	24.0	3.3	1	23	690	712	690	712	0.98
12	18	3.9e-06	0.00076	22.2	7.8	1	23	718	740	718	740	0.98
13	18	9.4e-05	0.018	17.8	8.2	1	23	746	768	746	768	0.98
14	18	3.2e-05	0.0063	19.3	7.7	1	23	774	796	774	796	0.98
15	18	0.00018	0.035	16.9	6.9	1	23	802	824	802	824	0.97
16	18	7.3e-05	0.014	18.2	0.8	1	23	830	852	830	852	0.98
17	18	0.17	33	7.6	5.0	1	23	862	884	862	884	0.98
18	18	1.7e-06	0.00032	23.3	1.0	1	23	890	912	890	912	0.98

Sequence Information

Coding Sequence: ATGAACAACGAAAATCAAAACGCTATCCAAAATGCTCATGGTTCTGGCCCTAACAATGATGTGTCCTCTCAGAGACAAAATTCTACAATACCAACTGATCTCCGAGTTAACACGACAGCATTAAACGCAGTGGCTCTAAGTAGTGTTGCCAAGTACTGGGTATTAACCAATCTTTTACCTGGTCCAATACCACAGGTTTCGGTGTATGGGTTATCAGGTGCTGGAAGGGATAATCAAGGGAAACTCACAcagGAGGCAGTTCTTAGCCAACATGCAGCAGGATTATTGCAAGCAGATCCACAACTTCTACTTCAGCAGCATGGTCAAATTCCTGTTAGCATATCAACTTCTCAAGGTACTATCGGTATTCCCGCTGGAGCTATACACTTGGACACTAGCCATGCTATTGCACAACAACATGGGCATCAACAGCAGGTGGAGCATAATCAAATGAATCGGGATGTTAGGatgtCCAATTCACAACAAAATCACGGACAACAAAATCTGGTTCAGGTGCAAGTAAATCAGGACAACATGGTTTCTGTAATTGACGAGAACAACGAAAAACATCACAAAGATATATTGACTGCACAGCTGCAAGCAGCACATATGCAACTGAATGAATCTCAGCTAAATAGTCAGGTTTTAACAGTGCAACAGTTACAGCAGTTACAAGCGCAACAAGTTCAGCAAGTTTTAGATAATGTAATGGTGAGAATGGAATCATCAATGGAGCACAATCAACAACAATCTCATAGTGAACATCAAAATAATCTGAACGATAACATAGACATGGTAAAAGATGAAAAATCGGTCCAATgcaaatttcttaataatgccCAATTGGGCCTCCAGGAAGTAAAAGGCAATATCATGGATGTACGAACTGCAGATGGAAGTATAGttaaaatacaaaCCAATATGCAGGAGCAGGAGTTAGCAAAAACTTTGGGAGTAGAGATGGTTCAAAATATGTATAAAGTGAATGTTGATGATCTAAATCAGTTATTAGCATACCATGAAATATTTGGGAAGTTGCAGACTCAGAgtGATGTATCTAATAATTCAAACCAAAATTTGTCTACTAATAATTCAAATAACAACAATGTCAACATACAGCAACAAAATTCTTCAAACATAGCTATCATAGCGAAGGATGAACATGAACCCAATACAAGTACTCTTCAACATAACGAAAATAACGCAACTTCTGTTATTACTGGCAACCACCAGTGCGATCTTTGCTTAAAAACGTTTCAGTTTCGGTATCAACTAATTGTGCATAGGCGGTATCACAGCGAAAAGAAACCTTTTACGTGTCAGGTTTGCGGTAAAGCTTTTCAAAATAACCAAGAATTGTCTAGGCATGGAAAATGTCACTTAGGAGGTAGCATGTTTACGTGTACCATTTGTTTTCATGTCTTTGCGAACGCACCTACTTTGGAACGGCACATGAAAAGACATTCGACCGACAAACCATATGCCTGTACAACATGCGGTAAAACGTTTGCTAGAAAGGAACACCTGGAAAATCATATGCGGTGCCATAGTGGCGATACTCCGTATAGATGCCAATTTTgtggtaaaaattttacaagaaaagaGCACATGGTGAACCATGTAAGAAAACACACTGGGGAAACGCCTCATAGGTGTGAAATATGCAAGAAGTCTTTTACGAGGAAGGAGCATTTTATGAATCACGTAATGTGGCATACTGGAGAAACACCGCATTGTTGTAACATATGTGGAAAAAAGTATACTAGAAAGGAACATCTTGCAAATCATATGAGGAGTCACACAAATGATACACCATTTagGTGTGAAATTTGTGGGAAAGCATTTACAAGGAAAGAACACTTCACTAATCATATTATGTGGCATACTGGCGAGACTCCTCATCGTTGTGATTTTTGTTCTAAAACTTTTACCAGAAAGGAGCATTTATTAAATCATGTTAGACAACATACGGGAGAATCGCCGcataaatgtgtgttttgtaaTAAATCTTTTACAAGAAAAGAGCATTTAACAAATCATGTTAGGCAACATACAGgagAAACTCCATTTAAATGTACTTTTTGCCCAAAAGCCTTTACTAGAAAGGACCATTTAGTTAACCATATACGACAGCATACGGGTGAATCTCCTCACAAGTGTACTTATTGTACAAAGTCGTTTACTAGAAAAGAGCACCTTAATAATCATATTAGACAACATACAGGTGAATCACCTCATAAGTGCCATTTTTGTGCTAAATCTTTTACAAGGAAAGAACATCTAACAAATCACGTTCGAATACATACAGGGGAGTCTCCCCATCGGTGtgaattttgtcaaaaaacgtTTACAAGAAAGGAACATTTAACAAACCATCTACGACAGCATACAGGGGAAACACCTCATTGTTGTAATGTGTGTTCTAAGCCTTTTACTAAAAAAGAACATCTTCTCATTCACATGCGATCACACACTGGTGAAAGACCGTTTACTTGTAGTGAGTGTGGAAAATCTTTTCCGCTGaaaggtaatctgCTATTTCACCAGCGTTCTCATAACAAAGGCCAACAAGCAGATAGACCTTTCCGCTGCGACCTTTGTGAAAAAGACTTTATGTGTAAGGGTCATCTAGTCTCTCACAGAAGATCTCATGGTGGTGAAAAACCTTTTAGCTGCACAGAATGTGGTAAATCATTTGTGGAAAAAGGAAATCTTTTAAGGCATAACCGAAAGCACGTTTCAGATAGGGAAAAGGCTGAGTTAGCTGAAAGTATGAATGCACAAAataatGTGCAACAATCGAATCAAAATCCAAGCAATCTTCAGATCTCGCAAGTTCAGGTGAATCAAAATTCTCAGCAACAACAGACTTCAAACAGCAATATTGTGCAGAGTGGGCATTTGATGCACACCTCTAACCACCATTCTGTTGTAGTACCTACTAATGGTAATGTTTTAGCTAGCTACTAG
Protein Sequence: MNNENQNAIQNAHGSGPNNDVSSQRQNSTIPTDLRVNTTALNAVALSSVAKYWVLTNLLPGPIPQVSVYGLSGAGRDNQGKLTQEAVLSQHAAGLLQADPQLLLQQHGQIPVSISTSQGTIGIPAGAIHLDTSHAIAQQHGHQQQVEHNQMNRDVRMSNSQQNHGQQNLVQVQVNQDNMVSVIDENNEKHHKDILTAQLQAAHMQLNESQLNSQVLTVQQLQQLQAQQVQQVLDNVMVRMESSMEHNQQQSHSEHQNNLNDNIDMVKDEKSVQCKFLNNAQLGLQEVKGNIMDVRTADGSIVKIQTNMQEQELAKTLGVEMVQNMYKVNVDDLNQLLAYHEIFGKLQTQSDVSNNSNQNLSTNNSNNNNVNIQQQNSSNIAIIAKDEHEPNTSTLQHNENNATSVITGNHQCDLCLKTFQFRYQLIVHRRYHSEKKPFTCQVCGKAFQNNQELSRHGKCHLGGSMFTCTICFHVFANAPTLERHMKRHSTDKPYACTTCGKTFARKEHLENHMRCHSGDTPYRCQFCGKNFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHCCNICGKKYTRKEHLANHMRSHTNDTPFRCEICGKAFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHKCVFCNKSFTRKEHLTNHVRQHTGETPFKCTFCPKAFTRKDHLVNHIRQHTGESPHKCTYCTKSFTRKEHLNNHIRQHTGESPHKCHFCAKSFTRKEHLTNHVRIHTGESPHRCEFCQKTFTRKEHLTNHLRQHTGETPHCCNVCSKPFTKKEHLLIHMRSHTGERPFTCSECGKSFPLKGNLLFHQRSHNKGQQADRPFRCDLCEKDFMCKGHLVSHRRSHGGEKPFSCTECGKSFVEKGNLLRHNRKHVSDREKAELAESMNAQNNVQQSNQNPSNLQISQVQVNQNSQQQQTSNSNIVQSGHLMHTSNHHSVVVPTNGNVLASY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00444375;
90% Identity: iTF_00444375;
80% Identity: -