Basic Information

Insect: Philopedon plagiatum
Gene Symbol: -
Assembly: GCA_963971165.1
Location: OZ020194.1:84356198-84368262[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 32 0.065 13 8.9 0.0 2 21 72 91 71 92 0.92

2 32 0.49 96 6.1 0.3 1 23 129 152 129 152 0.97

3 32 0.16 32 7.6 0.1 1 22 155 176 155 177 0.86

4 32 0.00018 0.035 16.9 3.1 1 23 220 243 220 243 0.97

5 32 3.5e-05 0.0068 19.2 1.3 1 23 272 295 272 295 0.94

6 32 0.0002 0.038 16.8 0.7 1 23 301 323 301 323 0.98

7 32 1.7e-06 0.00033 23.3 1.5 1 23 329 351 329 351 0.98

8 32 0.022 4.4 10.3 0.3 1 20 357 376 357 378 0.93

9 32 0.0065 1.3 12.0 0.4 2 21 451 470 450 471 0.95

10 32 0.002 0.4 13.6 3.3 1 23 496 518 496 518 0.96

11 32 0.29 55 6.9 0.1 1 23 541 563 541 563 0.98

12 32 0.41 80 6.4 0.3 2 23 568 589 567 589 0.93

13 32 3.7 7.2e+02 3.4 0.3 3 23 597 620 595 620 0.71

14 32 0.00011 0.02 17.7 2.1 1 23 626 648 626 648 0.97

15 32 0.0062 1.2 12.1 0.7 1 23 654 677 654 677 0.93

16 32 0.32 62 6.7 0.0 2 20 689 707 689 709 0.92

17 32 0.00046 0.089 15.7 0.3 1 23 726 748 726 748 0.95

18 32 1.7e-05 0.0033 20.2 0.3 1 23 754 776 754 776 0.98

19 32 0.00041 0.08 15.8 2.5 1 23 782 804 782 804 0.99

20 32 0.002 0.39 13.6 1.5 1 21 810 830 810 831 0.95

21 32 0.0032 0.62 13.0 0.4 2 20 900 918 899 920 0.93

22 32 0.0047 0.92 12.5 2.4 2 23 947 968 946 968 0.96

23 32 0.049 9.6 9.3 0.1 1 23 989 1011 989 1011 0.98

24 32 6.6 1.3e+03 2.6 0.1 2 19 1016 1033 1015 1037 0.91

25 32 2.5 4.8e+02 3.9 0.4 2 23 1044 1068 1043 1068 0.75

26 32 0.00096 0.19 14.6 5.3 1 23 1074 1096 1074 1096 0.97

27 32 0.0035 0.68 12.9 0.3 1 23 1102 1125 1102 1125 0.95

28 32 0.24 46 7.1 2.9 2 20 1137 1155 1136 1157 0.94

29 32 0.00032 0.062 16.2 0.2 1 23 1171 1193 1171 1193 0.95

30 32 3.1e-06 0.0006 22.5 0.8 1 23 1199 1221 1199 1221 0.97

31 32 0.00058 0.11 15.3 2.0 1 23 1227 1249 1227 1249 0.99

32 32 0.00051 0.098 15.5 0.8 1 21 1255 1275 1255 1276 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	32	0.065	13	8.9	0.0	2	21	72	91	71	92	0.92
2	32	0.49	96	6.1	0.3	1	23	129	152	129	152	0.97
3	32	0.16	32	7.6	0.1	1	22	155	176	155	177	0.86
4	32	0.00018	0.035	16.9	3.1	1	23	220	243	220	243	0.97
5	32	3.5e-05	0.0068	19.2	1.3	1	23	272	295	272	295	0.94
6	32	0.0002	0.038	16.8	0.7	1	23	301	323	301	323	0.98
7	32	1.7e-06	0.00033	23.3	1.5	1	23	329	351	329	351	0.98
8	32	0.022	4.4	10.3	0.3	1	20	357	376	357	378	0.93
9	32	0.0065	1.3	12.0	0.4	2	21	451	470	450	471	0.95
10	32	0.002	0.4	13.6	3.3	1	23	496	518	496	518	0.96
11	32	0.29	55	6.9	0.1	1	23	541	563	541	563	0.98
12	32	0.41	80	6.4	0.3	2	23	568	589	567	589	0.93
13	32	3.7	7.2e+02	3.4	0.3	3	23	597	620	595	620	0.71
14	32	0.00011	0.02	17.7	2.1	1	23	626	648	626	648	0.97
15	32	0.0062	1.2	12.1	0.7	1	23	654	677	654	677	0.93
16	32	0.32	62	6.7	0.0	2	20	689	707	689	709	0.92
17	32	0.00046	0.089	15.7	0.3	1	23	726	748	726	748	0.95
18	32	1.7e-05	0.0033	20.2	0.3	1	23	754	776	754	776	0.98
19	32	0.00041	0.08	15.8	2.5	1	23	782	804	782	804	0.99
20	32	0.002	0.39	13.6	1.5	1	21	810	830	810	831	0.95
21	32	0.0032	0.62	13.0	0.4	2	20	900	918	899	920	0.93
22	32	0.0047	0.92	12.5	2.4	2	23	947	968	946	968	0.96
23	32	0.049	9.6	9.3	0.1	1	23	989	1011	989	1011	0.98
24	32	6.6	1.3e+03	2.6	0.1	2	19	1016	1033	1015	1037	0.91
25	32	2.5	4.8e+02	3.9	0.4	2	23	1044	1068	1043	1068	0.75
26	32	0.00096	0.19	14.6	5.3	1	23	1074	1096	1074	1096	0.97
27	32	0.0035	0.68	12.9	0.3	1	23	1102	1125	1102	1125	0.95
28	32	0.24	46	7.1	2.9	2	20	1137	1155	1136	1157	0.94
29	32	0.00032	0.062	16.2	0.2	1	23	1171	1193	1171	1193	0.95
30	32	3.1e-06	0.0006	22.5	0.8	1	23	1199	1221	1199	1221	0.97
31	32	0.00058	0.11	15.3	2.0	1	23	1227	1249	1227	1249	0.99
32	32	0.00051	0.098	15.5	0.8	1	21	1255	1275	1255	1276	0.95

Sequence Information

Coding Sequence: ATGGAGCGCGAATGCAAGAGAAAGATTCAACAAAAACGGAAAAAAACAGATCCAAGGGAATTAGCAAAAACGCTCTTGAGCAAACTTCCTAATATCAAAACCAAGATCATCGTCAAGAAAAATGTAAAAGCGACAAATAATGCAAGAACAAGAAAAGTTCAACAAAGATCATCTAGATCAAGAACAGCAAATACTGATAAAAGGTGTTTCTGGCCTTGCTCAGAATGCCCTCAGATATTTTCTTCTGAAGAAAGACTCGCTGAGCACATTCTAAAATGCCCAGGTGGTAGTGCTGCGGGaatatttaagcaaaaaaagaaaacaggGGAAAGAAAGACGATGCCTCCTTTTGAGCCGTATCATTTTGATAGGTTTAAAAACGTTTACATCTGCACCAGATGTCTACGTGAGTTTAACGTAAAATCTTCTGCTGACGAGCACGTTAAAACGGAACATCCGGGTTTTAGGTGTGATATTTGCGATACAATATTCGAAACTATTGTTGATTTGGGGTATCACAGTGCAGAGCACGGCAATTCGAACGAAATGACGTGCCCGTGCTGTAATTTCAAGAGTGATGTGAAGTCGAAACTTGCTTTTCACATCCAGACCGAACATTCAAGCGACGCCGATTTGATAAGCGTTGAAGACGTCACTTTTACTTGTGTAGTATGTGGAAAAGCTTTCTACAATCGCAGAAAACTCTGGCACCATCAAAAGAACTATCACAAAGCAACCATTGCAATCCAACCATCTATGGGCGCTCGCTTAGAAGAACCCAGTGCGAGAGCAGCATCGAACGAACCAAGGGTATATCTTTGCGACACCTGCGGTAAAAACTTCAACTCAAAATACCGCTTGGAGCGCCATCAAAGAGCCATGCACCAGGGCCTTAAACCCTACATATGCCGATTCTGCGGCAGGGCTTTTACTGGCAAAGATACTATGCAAAAGCACGAGAGAATCCATACAGGAGAAAAACCTTATTCCTGCGAATACTGTGGAAAATGCTTCAGACAACCAGGACCGTTTACAGTACATCAAAGAATTCATACCGGGGAAAGACCATACGTTTGCAAACTCTGCAAGAAAGGGTTTATCACGAACCAGAGCAGGAAAGCTCATGCTAATAACTGCTTTTTTagggaagaaaaagaaaaaatcaagacTAGTTTAAGAAGAACTAGGTCTAGTAACAAAAACATAGAATTTAAAGAAGAAAGCGAAGATGAACTTGACTTATTATCCAGACTCAAGCTAAAAGATATTCCCCAAGATAATGACGATGAAGACGTTGACGAAATAACAAGGAAAAATCGAAAAAAGCGAATAAGCGGTATAAAATCGTGGAGATGCGAACGTTGCAATGAAGTTTTTTATAATACTTCACTCTGGCAACGGCACAGGCGCCAGAAAGATTGCACATTTGAACCTTTGCCAATCAAGGCGCCGAGCAAGGTCAAAAATTCATACAAATTTCGTGTACATGCATGTAAATATTGTGCCGAAACCTTCAAAACCTTTAAATTACTAAAAGCGCATAAAATGACCCACAAACCTGACTTGGAAGAAATAGAAGAAGAAGAGCCAACTTACAAATTGGATGACCTTCAAGATCTGTACATATGTAGCGTGTGTTCTGCAGAGTTTCAGGAAGAATCTGAAGCaaaagaacatttaaaaatgCACAGAGAACTGATAAGTTGCGTAGAatgcaaaacaatatttaaGACTTACTTCGATCTTGGAATGCACTCTGCTAGGCACGATCCAGATCATAAGGTCCACTGTCCATTATGTCCTTATGTATCTTCCAATTCGAATCCTTATAGTTTCAAGGCTCACATGAACTATGTTCACTTGAAGAAATTTCCATTTTATTGTAAAGAGTGTGGCAAAGGTTTTAAGCAATATAAAACTTACAAcgagcatcaaaatgctcatTTGGGAAAGAAGCCATATGTATGCATAGTTTGCCAGAAAGGGTTtacttatcaaaaatatttgcaAGTTCACCAAGTGAGAAATCATCAGGTTGGTACTACGGGCAACAAAATCGAGAACGAATGTCGCACTTGTAACAGGTACTTCTACAAACCGGAAGCTCTTATAGAACACGTCGAAGTGTGCTACAAGAGGAAGAAAAAAGTTAAGAGTGCTACTCCTGCCAAAGCGTTTCTTTGTGATTCCTGCGGACAGACTTTTACGGAAAAAGCCAAGTTGTTAGAACATCTCAGGGTGCACAAAGGCGATCTTCCTTTCGTGTGCTCGTGGTGTGGTAAAAGGTTTCCTGTCAAAGCTTACCTTAAGACTCACGAGAGGGTTCACACTGGAGAAAAGCCGTATTCGTGTGAGTTTTGCGGAAAGAGATTTGGACAGCACGCGCCATTTAGagTACACCGGAGAACACACACTGGAGAGCGACCTTACAAATGCGACTTTTGTAGTAAGGGCTTTACCACCAATCAAGGCTTAAAGCTTCACAAGAAAAATTGTCCAGATAACCAAGTTATCAAGATGTTAAATTCCAATCCTTCCAATTCCAATCCAGTTCCAGCAGTGATAAAAGTACAAACAGGTAACAGGCGACGCTCCACCAGGCAGACCAAGCCAGtcgttaaaataaaacaagaaattgACGACGACAAGCAAGCAAGGGAAAATAACAAAAAGAGAAAAAACTGTGTCAAATCTTGGCAATGCGAACAGTGCCAAAAAGTCTTTGAAAAAGCAAAACTCTTCCAGCGACATAGAGCAAAAGAAGATTGCCTTTATAAGCCGGTGGAggtcaaaaaagaaaaaccatcTCCCCAACAAGATCGTCTCGACAAACTGTGGCATTGCAAGTATTGTGATGAGCCTTTTCAAACCCTAAAGTTATTACGTGATCACAAAAAATCTCACAAAGCTGAAGACATCAGGGAAGAAGATCCTTCTTATAAATTCGATGAATTACAAGACTTGTATATTTGCGAAGTATGTTCTGCAGAATTTCAGAAGCAAAGCGAAGCTGAAGATCATGTTAAAACTCATATAAGCGGGATGAAGTGTGGTGACTGCCAGGAGTGGTTCAAAACACCTTTCGATCTAGGAATGCACTCTCCAGTTCACAGTGAAGACGGCAAAATAAAATGCCCTCTATGTAAATACGTCAGTAAAAGTTCAAACCCTTACAGTTTTAAAGCTCACCTGAACTACATGCACTTAAAGAAATTTCCCTTTTACTGTAAGGAATGCGGCAAAGGTTTTAAGCAGTACAAGACTTACCACCAGCACCAAAACCTTCACACTGGTACCAAGCCATTCGTGTGCGTGGTATGCGAAAAACCATTCACATTCGAAAAATACTTAATGGTACATCAAGTGAGAAATCACCAAGTTTTTACTACTgcaaataaaatcgaaaaagaaTGTAAAAGATGCCATAGGTATTTCAAAAAAACAGAAACTTTGCATGAACACATGGAAGAGTGTTATCGAAAGAGAAAGGCGCTCAAAAAACCCAATTCGTTTTTGTGTGACACCTGTGGACAAGGTTTCATCGAAAAAGCAAAGCTTCTTAAACATATTAGAGTTCACGTGGGTGACTTACCATTCGCCTGCAAGTGGTGCGGTAAAAAATTCCCCCAAAAAGATTACCTAAAAACCCACGAGAGAGTGCACACCGGAGAAAAGCCTTATTCCTGCGAGTTTTGTGGAAAACGTTTCGGTTTTCATGCCCCCTTCAGAGTGCACATCAGAACGCATACAGGAGAAAGGCCGTACGTGTGTAATTTTTGCGATAAAGGGTTTACGACCAATCAGGGCTTAAAGCTGCATAAGAAGAATTGCCCGGAAAATCAGTTAAATAGAATGTTAAGCGAGGAAGCTGGATATCTAATCACGAAATGA
Protein Sequence: MERECKRKIQQKRKKTDPRELAKTLLSKLPNIKTKIIVKKNVKATNNARTRKVQQRSSRSRTANTDKRCFWPCSECPQIFSSEERLAEHILKCPGGSAAGIFKQKKKTGERKTMPPFEPYHFDRFKNVYICTRCLREFNVKSSADEHVKTEHPGFRCDICDTIFETIVDLGYHSAEHGNSNEMTCPCCNFKSDVKSKLAFHIQTEHSSDADLISVEDVTFTCVVCGKAFYNRRKLWHHQKNYHKATIAIQPSMGARLEEPSARAASNEPRVYLCDTCGKNFNSKYRLERHQRAMHQGLKPYICRFCGRAFTGKDTMQKHERIHTGEKPYSCEYCGKCFRQPGPFTVHQRIHTGERPYVCKLCKKGFITNQSRKAHANNCFFREEKEKIKTSLRRTRSSNKNIEFKEESEDELDLLSRLKLKDIPQDNDDEDVDEITRKNRKKRISGIKSWRCERCNEVFYNTSLWQRHRRQKDCTFEPLPIKAPSKVKNSYKFRVHACKYCAETFKTFKLLKAHKMTHKPDLEEIEEEEPTYKLDDLQDLYICSVCSAEFQEESEAKEHLKMHRELISCVECKTIFKTYFDLGMHSARHDPDHKVHCPLCPYVSSNSNPYSFKAHMNYVHLKKFPFYCKECGKGFKQYKTYNEHQNAHLGKKPYVCIVCQKGFTYQKYLQVHQVRNHQVGTTGNKIENECRTCNRYFYKPEALIEHVEVCYKRKKKVKSATPAKAFLCDSCGQTFTEKAKLLEHLRVHKGDLPFVCSWCGKRFPVKAYLKTHERVHTGEKPYSCEFCGKRFGQHAPFRVHRRTHTGERPYKCDFCSKGFTTNQGLKLHKKNCPDNQVIKMLNSNPSNSNPVPAVIKVQTGNRRRSTRQTKPVVKIKQEIDDDKQARENNKKRKNCVKSWQCEQCQKVFEKAKLFQRHRAKEDCLYKPVEVKKEKPSPQQDRLDKLWHCKYCDEPFQTLKLLRDHKKSHKAEDIREEDPSYKFDELQDLYICEVCSAEFQKQSEAEDHVKTHISGMKCGDCQEWFKTPFDLGMHSPVHSEDGKIKCPLCKYVSKSSNPYSFKAHLNYMHLKKFPFYCKECGKGFKQYKTYHQHQNLHTGTKPFVCVVCEKPFTFEKYLMVHQVRNHQVFTTANKIEKECKRCHRYFKKTETLHEHMEECYRKRKALKKPNSFLCDTCGQGFIEKAKLLKHIRVHVGDLPFACKWCGKKFPQKDYLKTHERVHTGEKPYSCEFCGKRFGFHAPFRVHIRTHTGERPYVCNFCDKGFTTNQGLKLHKKNCPENQLNRMLSEEAGYLITK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -