Ppla088749.1
Basic Information
- Insect
- Philopedon plagiatum
- Gene Symbol
- clz9
- Assembly
- GCA_963971165.1
- Location
- OZ020197.1:39585503-39587491[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.4e-07 5.1e-05 25.3 0.1 3 39 18 54 16 59 0.90
Sequence Information
- Coding Sequence
- ATGGTTCGCCattatgtaagaaaaaatactGCACAGCCTAAATATAGCAAAGAAAGTTTAAAGGCAGCATTGCAAGAGATTACAGCAGGTAGATTAACTATATATGCAGCATCAAAGAGGTATAACATTCCGTATCCAACCCTGTATACACGCATAACAGGTACACGTAAAAGTAAGGGTCGCCCAACTGATGTGCCTCTAGCCGCCGAAATTGATTTGGCAAATGGATTAAAAGTCCTAGAGAAATGGGGGTTTGGGCTCTCCCGCAAGGAAGTTTTGGAAAGAGTAGGCATGTTTGTTCAACAGAACAATATTAAAACCTCATTTAAAAACGGTATCCCAGGAGAAGACTGGTTCATCGGCTTCAAGAAAAGACACCAATTAAGCCTAAAAGTACCCCAAAACGTGGAATATTGTAGAAAAAAGGCCGTGGATCCATTTTCAATCTACGGTTATTTTGATCTTCTAAAAAAGACACTCACCGACCTTAATCTACGCGACAAGCCAGAAAGGATCTGGAATTTAGACGAGTCCAGCTTTTCAATTGACCCTAGAAAAAGCAAAATTGTGGGGGGAATCGGTTTACCAGCATCGAGAACTACCAGTACCTCTGGCCGAGAAAATACTACGGTATTGGTAATGTGTAATGCCGCAGGGGGAAAAGCACCACCTTTGATAGTGTTTAAAGGTGTTCACATATGGGATCAATGGGTGGCTTCCGAGGAAAAAACATTTGAAGGTACTGTTTATGCCGCGACGAAAAAGGGCTGGATGGACTCGGAAGTCTTTCGGAATTACTTTGTAAATTCAGTAATTGCTGCAGTAGGAAATGATCGCCCCGTTTTAATTATATATGACGGTCATGGGTCACATGTCGATGCTCGTTTAATACAAACTGCCATAAGTGAACAAATAACACTAATTAAACTACCTCCCCATACGACACATATTCTCCAACCCCTAGATTTAAGCGTGTTTAAATCTCTAAAAACGAAATGGGATGAAAAGCTAATTGTATGGCAGCGACAACATCTAGGTCAAAAATTACCCAAGAGAATATTTTCTGAGTTTTTATGCCAAGCCTGGAAGGAAGTTACGACAGAAGTAATTAGAAACGGCTTTAGAAAGGCAGGGATATTTCCTCTTGATGCTACAATTATTTCAAGAGACATATTTTCCCCGGAAGCTCTAAAAAGATGGAACCTACTTCAAGAAGAAAAAAGGAATGTCAGTGCACTGAACTCCCAAAACGACGAACAAGAAGTTCAGTTCTCCAACGTCGCCAAAGAAACTTTTTCTGAATGTGATCAAGAGGCCGGCCCATCcaacattaataaaaagagTATCTCCGGAGATGTACAAGAGGCTGGCCCATCGGGCTTATCCAATATTCAGGATGAAAATATTTGTGGAGAAGTCAATAACAATAAGGAGACTATGACATTCACCGACTTGTTGCTAAGAACAATCAAGCAGAAGCCAGCACCCGAAAAATGTAAGCGAACCAAAGTTGGATTTGGCTCTGAAGTTCTTACAAGTAAACAAGTATTACAACGACTTGTAGAAAAGTTAGACTCGAACAAGAAGAAACCCCAGAAAAATAAGAAGATAGTGCAAGCCGTCAGTAGTGATGAGGAATGCGAAAGCCCTGAATATATGGAATCTGATGAAGACAATGAGTTTCTTGAAGAGGAAAGCGACTCAGAAAACTGTTCGGTGGTTGAAGTGGCTTCATGGGTCCTAGTTCAATATGcatcaaaaaaatttgttgcaCATTACGTTGGTCAAGTTACGGACAAGGACGAGGAGGACGATGCCTGGCaggtcaaatttttaaaatggaaaaaagatctCTTCATTTGGCCTGTTATCGAGGACAAAGATACAATTCGTTCCGAGGACATTGTAAAAGTCTTGCCAAAACCGATTACAACCAGACGGGGACACcttaagtttaatgtaaaatttgaaggCTTTAATCTTATATAA
- Protein Sequence
- MVRHYVRKNTAQPKYSKESLKAALQEITAGRLTIYAASKRYNIPYPTLYTRITGTRKSKGRPTDVPLAAEIDLANGLKVLEKWGFGLSRKEVLERVGMFVQQNNIKTSFKNGIPGEDWFIGFKKRHQLSLKVPQNVEYCRKKAVDPFSIYGYFDLLKKTLTDLNLRDKPERIWNLDESSFSIDPRKSKIVGGIGLPASRTTSTSGRENTTVLVMCNAAGGKAPPLIVFKGVHIWDQWVASEEKTFEGTVYAATKKGWMDSEVFRNYFVNSVIAAVGNDRPVLIIYDGHGSHVDARLIQTAISEQITLIKLPPHTTHILQPLDLSVFKSLKTKWDEKLIVWQRQHLGQKLPKRIFSEFLCQAWKEVTTEVIRNGFRKAGIFPLDATIISRDIFSPEALKRWNLLQEEKRNVSALNSQNDEQEVQFSNVAKETFSECDQEAGPSNINKKSISGDVQEAGPSGLSNIQDENICGEVNNNKETMTFTDLLLRTIKQKPAPEKCKRTKVGFGSEVLTSKQVLQRLVEKLDSNKKKPQKNKKIVQAVSSDEECESPEYMESDEDNEFLEEESDSENCSVVEVASWVLVQYASKKFVAHYVGQVTDKDEEDDAWQVKFLKWKKDLFIWPVIEDKDTIRSEDIVKVLPKPITTRRGHLKFNVKFEGFNLI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01238769;
- 90% Identity
- -
- 80% Identity
- -