Ppla073382.1
Basic Information
- Insect
- Philopedon plagiatum
- Gene Symbol
- -
- Assembly
- GCA_963971165.1
- Location
- OZ020194.1:94639858-94640471[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.9e-07 2.2e-05 26.5 0.0 2 39 49 85 48 87 0.95
Sequence Information
- Coding Sequence
- ATGAAAACACATGGCACTGTTCGTGGTAGGAGTGATTTGGTGTGGTATCGgcAGCCACCCAGTGCACCTAACTTGCAACACCACCAAAACATGCCACCGAAATCGAGACGTGTACTAGGTGCCAGAACGTATTGTAATTATAGCCACGAAACATTACAAAAGGCCCTAGATATGATAAATAGTGGCGTACCGATTAGAGAAGCATCTAGAGTGTTTACAATTCCTGCTTGTACTTTATCCCGGAAAAAACGAGGTTTGTTTCCTGGGTCCTTTGGCTTTGGAGGACAAAAAGTATTTACTGAAGCTGAAGAAAAACAACTTGTCAATTGCGTAACGACAGCTGGTCATTTGGGGATTTCCGGTTACCGTATATGA
- Protein Sequence
- MKTHGTVRGRSDLVWYRQPPSAPNLQHHQNMPPKSRRVLGARTYCNYSHETLQKALDMINSGVPIREASRVFTIPACTLSRKKRGLFPGSFGFGGQKVFTEAEEKQLVNCVTTAGHLGISGYRI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01187651; iTF_01187582;
- 90% Identity
- iTF_01187582; iTF_01187651;
- 80% Identity
- -