Ppla033500.1
Basic Information
- Insect
- Philopedon plagiatum
- Gene Symbol
- clz9
- Assembly
- GCA_963971165.1
- Location
- OZ020191.1:44854261-44856165[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2e-07 2.4e-05 26.4 0.0 2 39 17 54 16 59 0.92
Sequence Information
- Coding Sequence
- ATGGTTCGTCATTACAAGCGCAAAACGCAGCCTAACAAAAAATATGATGATGGGAACCTGCAACAGGCATTACAGGAGGTTCGAGCTAAGCGTATGACAAAGTACCGCGCTTCCATAGCTTTTAACATCCCATATAGTACCCTCTATAGCCACGAAAAGGGTTTACGCGGAGTAAAAAGCTCTAGCAAGGGTAGAACATGTGCACTTACACCTGCAGAAGAACAAAAGCTGGTCCTTGGGCTTATAACCCTCGAAAAATGGGGATTTGGGTTAAGTCGGAAAGAAGTCCTTGAACTAGTCGCTAAATATGTCACCCAAAATAACATCAAAACCCCTTTTAAAAACAATGTACCAGGCCCAGATTggttcataaattttaaaaaacgacaCAAGTTAAGTTTAAAGATTCCACAGGCAGTCGAGTTTGCTCGCAAAAAGGCTACCGATCCTTTCGTGATATACAAATATTTCGATTTACTAGAAAAAACACTAAAAGACCTAGACTTAAGCGAAAAATCAAATCAGGTGTGGAACTTGGATGAAAGTTCTTTCTCCATTGATCCGTCCAAATGTAAAGTAGTAGGGTTAAAGGGAGTTGCTTGTTCCCGAACAGTAAGCTCCCCTGGCCGAGAGAACACCAGTGTCTTAATGTGCGCAAATGCTGCCGGTAATAAAGCACCACcgttaattatatttaaaggCCTTAACGTGTGGGATCAGTGGATGGCCCCTAAAGGAACCGGCTTTCCAGGTACAGTCTATGCTGCCAGCAAGAAAGGCTGGATGGagtcaacaatatttttaaatttttttaagaaaactttaATACCTTGTTTTGGAAATGAGAGGCCAGTGTTAGTTATCTATGATGGCCACAGCACACACCTAAGTCTCGAGGTCATTGAAACAGCCCTGGCAGAACGTGTGACGATTTTAAAGTTGCCCCCTCACTGCAGCCATCTACTCCAGCCCCTCGATCTGTCGGTTTTTAAAGCTTTAAAGTCAAGATGGGACGAGAGGTTGGTGAGGTGGCAAAGACAGCATGTGGGGCAAAAACttcctaaaaaattatttgcgcAATATTTAGGCGAAACATGGCAATCGCTAGAAGACACCATAAttcaaaatggatttaaaaaaggTGGGATAGTACCTTTTAATCGAAATGTTATTCCGAGAGAAAAGTTCTGCCCTGAAGCACTTAAAAGATGGGATCTCCATAATCAGTGTTCCGATCTTCCAGAGCATGTAACGGCGGACAGTTCTGAAACGGACCAAGAAGGCGTTGCTTCGACTTCCGCATCTGTGCCATCTGATTCAACTTCTGCATCTGTGCCACCTGAGAATTTGGTTACATTTGAGTCGCTTCTACTCTCTACTGTCAAGCAAAAAAGACCTAATGAGAAGCTTCCAAGAAAAAAAGTAGCCGCTGGTGCTGAAATAATAACCAACGAAATTCTTTCTTTGAAGTCCCCTCCTGTGAAacgcttaaataaaaaaagggaaCAGACTGATAGTTCTTCAGACTCGAATGATCAAGACCCAGGAGACTTCTCTGTCCAGGACTCCGACAGCGATAATGAATTTTTAGCCAACTTACTAAATCCTTCTCCAGAACCTACGGATGTAATAGAGCAAGTTCTAGAGGTCAACAAATGGGTGCTTGTTGAGTACGCCACAAAAAAAACCAAGAAACACTTTGTCGGCCAAATAATTGAACGGGATGGGATAGACtgggtaattaaatttttgcgaCCAAAAGGTATTAAGTTTATATCACCTCCAGTAGATGATATTGACACTGTTGAAGAAAGTAACATTATTAAAGTGCTTCCAGAACCGATCGTTGACCGAAGGGGCATAATTTCGTTTAATATAACCTTTTCTGggtttaacataatataa
- Protein Sequence
- MVRHYKRKTQPNKKYDDGNLQQALQEVRAKRMTKYRASIAFNIPYSTLYSHEKGLRGVKSSSKGRTCALTPAEEQKLVLGLITLEKWGFGLSRKEVLELVAKYVTQNNIKTPFKNNVPGPDWFINFKKRHKLSLKIPQAVEFARKKATDPFVIYKYFDLLEKTLKDLDLSEKSNQVWNLDESSFSIDPSKCKVVGLKGVACSRTVSSPGRENTSVLMCANAAGNKAPPLIIFKGLNVWDQWMAPKGTGFPGTVYAASKKGWMESTIFLNFFKKTLIPCFGNERPVLVIYDGHSTHLSLEVIETALAERVTILKLPPHCSHLLQPLDLSVFKALKSRWDERLVRWQRQHVGQKLPKKLFAQYLGETWQSLEDTIIQNGFKKGGIVPFNRNVIPREKFCPEALKRWDLHNQCSDLPEHVTADSSETDQEGVASTSASVPSDSTSASVPPENLVTFESLLLSTVKQKRPNEKLPRKKVAAGAEIITNEILSLKSPPVKRLNKKREQTDSSSDSNDQDPGDFSVQDSDSDNEFLANLLNPSPEPTDVIEQVLEVNKWVLVEYATKKTKKHFVGQIIERDGIDWVIKFLRPKGIKFISPPVDDIDTVEESNIIKVLPEPIVDRRGIISFNITFSGFNII
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01187537;
- 90% Identity
- iTF_01187566; iTF_01187568; iTF_01187569; iTF_01187570; iTF_01187571; iTF_01187572; iTF_01187573; iTF_01187574;
- 80% Identity
- iTF_01187568; iTF_01187569; iTF_01187570; iTF_01187571; iTF_01187572; iTF_01187573;