Basic Information

Insect: Philopedon plagiatum
Gene Symbol: X-element\ORF2
Assembly: GCA_963971165.1
Location: OZ020192.1:44518453-44526180[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 2.3e-07 2.7e-05 26.2 0.0 6 39 447 479 443 483 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	2.3e-07	2.7e-05	26.2	0.0	6	39	447	479	443	483	0.90

Sequence Information

Coding Sequence: ATGTTCCCAACTGTTTCTGATGCTACAACAGTTACTGAAAGCTCCTCCACTTTAATTGATAATATATTCTGTAATTTAAGTTCTGATTTTGAGGCTGACGGATATGTTTTAAATACAGCACTATGTGATCATCATGCCCAGGTTCTGAGTGTGAATGGTGTTGATGTCACTCAAGGTACTAAAGGTGTTTTTCCATATATGCTCAAGACTGCATACGTAAAAGCTATACATAAAAAGGGCGATAGagatgaagaaaaaaattaccgaCCTATTTCTCTATTGTCAAATATTAGCAAAGTCTTGGAAACGGTGATACTCTGCGGACTGATGTCGTTTTTTGAGAGACATTCTGTGATTACTGATAGACAGAATGGTTTTAGAAGGGGCAAATCCACAATAAGGGCAATTTATCAAGCCCTAGAAAAGGTTTTAAATTCACTAAACAATAAGAAGCAAACGGTGCTTATGTGTACGGACCTTTCTAAAGCCTTTGATTCTGTCAACCATGTTTTACTCtgtaaaaaacttgaaatgTATGGAGTGCGTGGTATAGCCTTACATTTAATTGAATCATATTTGAAAGATCGTGTACAGCAGGTGGTTGAGTGTGGAGAGAATGGTGTCTTATGTAAATCCGAGAAAATTGTTGTTTCCAGGGGAGTTCCCCAGGGATCAATCTTGGGACCTCTTCTGTATGTGGTGTATACGAATGAGCTTCCTGATGTCTCTGAGGAGTACACTGTTTTATATGCAGATGATACATCTCTCATATTTAGCGAAGAAAATGAAGAAATACTTCTTCATAAAATGTATACTGCAATGGATGCCCTTGATGCATATTTTTTGGCCAATGATCTGCTGCTGAATTTGTCAAAAACGCAGACTCTCGCTTTTGGAAACAGAGCAGATAATACCTTCGAACTCTTCTACAATGATGAAGAGCTAAAATCTTTAGAGAGTATGCGTTTTTTAGGTGTGCACATCGATAAAAGATTGGACTGGAGAGCCCATATTGAAACTGTAGCCAACAGTATATCAAGATACTGTTTTGCCTTGCGTGTAATAACTGACCATGTTAGTACTGAAGCCGCTATTATTGCTTACCATTCATATATTCAGTCTAGATTGAGATATGGTGAAATATTTTGGGGTGATTCGCCTGATATACACAGAATTATGGTGTGGCTGGTAGATCAAATGTTCCAAACAGGCTACAAGTTGTTAGTGGCCATAGTTCACGTGCAGAAGAGAAGTGAATGTGCGACGAGCGTAAATgaaatttCAATGCcgcgatttaaaaaaagaaaaacggacAGATCTTTGAATACAGATGCTGTTAAATCAGCGATACTGGCATATAGATCGGGAGTTTCTATTAGAAAAGCCGCGAAGGACCATGGAATTGATAAAGAAACATTGAGAaggcatttgaaaaaagttggcCAAGCTGATGAAGAGTATATGGTTATTTCACAGAACTATGGctggaataaaatttttacaagccAGCAAGAACAAGTTTTGGTTGAATACATCTTAAAATGTTGTGAAATGGGATACGGGTTTTCAAGAGATCAAGCCAGGCAACTTGCATATGAGATGGCTTTAAAAAATGATGTCAAAGGTCCTaataattggaaaaaaatcgCTACAGCTGGAATTGAGTGGTACAAAGCATTTTACAAACGGCACCCGCGGCTTTCTTTAAGAAAACCTGAAGCTTGTAGTTTGAGCAGGGGAACCTCTTTTAATCAACATACAGTGGGAACGTTTTTCGATAATCTTGAAAAAGTTCTCAAACGTCATCCTAATTTCATGAATGGTcccagaatttttaatttagatgaAACGGGTAACACTACCGTTCAGACGATTCATAAGGTATTGGCGACGAAAGGAGTTAGACAAGTGTCCCAAAACACTAGTGCTGAAAAGGGAACTCTGGTGACAACTTGCTGCATCATTTCTTATTAA
Protein Sequence: MFPTVSDATTVTESSSTLIDNIFCNLSSDFEADGYVLNTALCDHHAQVLSVNGVDVTQGTKGVFPYMLKTAYVKAIHKKGDRDEEKNYRPISLLSNISKVLETVILCGLMSFFERHSVITDRQNGFRRGKSTIRAIYQALEKVLNSLNNKKQTVLMCTDLSKAFDSVNHVLLCKKLEMYGVRGIALHLIESYLKDRVQQVVECGENGVLCKSEKIVVSRGVPQGSILGPLLYVVYTNELPDVSEEYTVLYADDTSLIFSEENEEILLHKMYTAMDALDAYFLANDLLLNLSKTQTLAFGNRADNTFELFYNDEELKSLESMRFLGVHIDKRLDWRAHIETVANSISRYCFALRVITDHVSTEAAIIAYHSYIQSRLRYGEIFWGDSPDIHRIMVWLVDQMFQTGYKLLVAIVHVQKRSECATSVNEISMPRFKKRKTDRSLNTDAVKSAILAYRSGVSIRKAAKDHGIDKETLRRHLKKVGQADEEYMVISQNYGWNKIFTSQQEQVLVEYILKCCEMGYGFSRDQARQLAYEMALKNDVKGPNNWKKIATAGIEWYKAFYKRHPRLSLRKPEACSLSRGTSFNQHTVGTFFDNLEKVLKRHPNFMNGPRIFNLDETGNTTVQTIHKVLATKGVRQVSQNTSAEKGTLVTTCCIISY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -