Ppla009730.1
Basic Information
- Insect
- Philopedon plagiatum
- Gene Symbol
- clz9
- Assembly
- GCA_963971165.1
- Location
- OZ020189.1:63396477-63408177[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.00011 0.013 17.6 0.1 5 45 1 41 1 41 0.90 2 2 0.022 2.6 10.2 0.1 19 45 488 514 486 514 0.86
Sequence Information
- Coding Sequence
- ATGCAGCAAGCACTGTTGGCTGTTAAACAAAACAATGTTTCAGTTAAATCTGCAGCTAAACATTTTAGCGTTCCAAAGACCACAGTTCATTACAAAGTTACGGGAAAGTACCCAGAAAAACGTCAAATGGGCCCAAAAACGAATCTTCTGCAGGAAGAAGAAACAAACATAGTTGATTGGATGTTCAAAAGTGCAGATAGGGGGTTTCCAATTACTAAATCTCAGCTGTTGGATTCCGTCCAGATGCAAAGCACGGGCGTCTATAACAGAAGAGGGCTTGATGCAGTACTAACTGATTTGAAAGACTACACTTACGTGTTAGAGGATCCAAGTCGGGTATTCAATGTTGATGAAACCGCAATATTTTTAGCCCCAAAGGGAGAAAGAACTTTAGTATGTAAAGGCGAGAAATCTGTTTATTCCTTTACAAGTAATGATGAGAAGGAGTGCCTCACTTGTCTAATAGGATCAAATGCTCTTGGTCAATTAATGCCTCCTATGGTGGTATTTAAATATGAGCGAGTACCATCAGCTATTATCAGTGAAATGCCCAATCATTGGGCCTTTGGAAGAAGCGAATCGGGATGGATGACTGGTGAAACTTTATTTGAGTACGTTGCCAACATCTTTCATCCATGGCTGATAAACCAGAAGATTATGTTACCTGTAGTACTCTTTGTCGATGGTCATTCAAGCCATTTAACCTATTGTTTAAGCCAGTTCTGCAGCGAAAATGGAATAAATTTGGGAGCACTTCACCCTAATTCGACGCATATAATCCAGCCAATGGACGTGGCGGTGTTTCGGCCCCTAAAAGAGCATTGGAGGCAGGCCGTGCAttcatttaaagtaaaaaacttaGGAGCAAAATTAAAACGTGAAAATTTTGCCCCTCTTATGGATAGCGTGTTAAAACAGTTAAAGCCTGAATCATTCATTAATGGATTCCGACGTTGTGGACTTTATCCATTTGACAAAAATGCAGtcaaCTTAGATAAGATAGCAAGATTTGAAAACAATGATCTAGAGAATGGTGATACGTCTTTATATCTGctgtggaaaaaattaaaagaagactGCGGTTTCGAACCAAATACTAGAACAGGAAATACAGaaataaataacgattttgaaGAAAGTTCTATCCAGGAATCAGAAAAACAAATAAGCGATGAGGCAGGAAATACAGaaataaataacgattttgaaGAATACCAGGCACTAGAAAAACAAATAAGCGATGAGGCAGGAAATACAGaaataaataacgattttgaaGAAAGTTCTATCCAGGAAGTAGAAAAACAAATATGCGATGAGGCAGGAAATATAGAAATAAGTAGCGATAAGACAGAACAAAGAGAGTTAACAAGCAAAAAAGAACAAAGCAAAGTAGAAAACAACTCAATTAGCGAGACGACAAATCAAGAAATATCTCCTAGTCGTCATCTATACACAACAGTTAAATCTGCAGCTAAACATTTTAGCGTTCCAAAGACCACAGTTCATTACAAAGTTACGGGAAAGTACCCAGAAAAACGTCAAATGGGCCCAAAAACGAATCTTCTGCAGGAAGAAGAAACAAACATAGTTGATTGGATGTTCAAAAGTGCAGATAGGGGGTTTCCAATTACTAAATCTCAGCTGTTGGATTCCGTCCAGATGCAAAGCACGGGCGTCTATAACAGAAGAGGGCTTGATGCAGTACTAACTGATTTGAAAGACTACACTTACGTGTTAGAGGATCCAAGTCGGGTATTCAATGTTGATGAAACCGCAATATTTTTAGCCCCAAAGGGAGAAAGAACTTTAGTATGTAAAGGCGAGAAATCTGTTTATTCCTTTACAAGTAATGATGAGAAGGAGTGCCTCACTTGTCTAATAGGATCAAATGCTCTTGGTCAATTAATGCCTCCTATGGTGGTATTTAAATATGAGCGAGTACCATCAGCTATTATCAGTGAAATGCCCAATCATTGGGCCTTTGGAAGAAGCGAATCGGGATGGATGACTGGTGAAACTTTATTTGAGTACGTTGCCAACATCTTTCATCCATGGCTGATAAACCAGAAGATTATGTTACCTGTAGTACTCTTTGTCGATGGTCATTCAAGCCATTTAACCTATTGTTTAAGCCAGTTCTGCAGCGAAAATGGAATAAATTTGGGAGCACTTCACCCTAATTCGACGCATATAATCCAGCCAATGGACGTGGCGGTGTTTCGGCCCCTAAAAGAGCATTGGAGGCAGGCCGTGCAttcatttaaagtaaaaaacttaGGAGCAAAATTAAAACGTGAAAATTTTGCCCCTCTTATGGATAGCGTGTTAAAACAGTTAAAGCCTGAATCATTCATTAATGGATTCCGACGTTGTGGACTTTATCCATTTGACAAAAATGCAGtcaaCTTAGATAAGATAGCAAGATTTGAAAACAATGATCTAGAGAATGGTGATACGTCTTTATATCTGctgtggaaaaaattaaaagaagactGCGGTTTCGAACCAAATACTAGAACAGGAAATACAGaaataaataacgattttgaaGAAAGTTCTATCCAGGAATCAGAAAAACAAATAAGCGATGAGGCAGGAAATACAGaaataaataacgattttgaaGAATACCAGGCACTAGAAAAACAAATAAGCGATGAGGCAGGAAATACAGaaataaataacgattttgaaGAAAGTTCTATCCAGGAAGTAGAAAAACAAATATGCGATGAGGCAGGAAATATAGAAATAAGTAGCGATAAGACAGAACAAAGAGAGTTAACAAGCAAAAAAGAACAAAGCAAAGTAGAAAACAACTCAATTAGCGAGACGACAAATCAAGAAATATCTCCTAGTCGTCATCTATACACAACAGACGTAAAAAAACGCCAACTGAAAGAACTCATGCCGTCAGTAATCTCAggtgaaaaaggaaaaaaatattttaagaaaaaagaaaacgaGCGGGAAAGAAAAGAactagaaaaagaaaatagaaaGAAAAAGCGGGAAGAAGTAAAGGTTTTGAAAGAAAGAGACAAGGCAGAGCGAAAACGAAAATTGGAAGAAAAGAGACAGACAAGACTAAAGCAAATAGAGAAGAAGCGAAATATGAAAAGAAAACACATTACTGCTAGTGAATCATCCGATTCATCAGTTGAAATGACAAGTGAATCAGAAGGCGAAGGAGACAATTGGGATCAACCACCATCGGATACTACTGaagaaaatgatgaacacaccATTTCAGTAAAGGACCATGTAAAAAAAGACGACTTTGTTATTATAGCTTACGATAATAAATATTACCCTGGTCAAATAAGAAAGATTAATCGTCAGCGAAAAACCTATCTAGTGAGTTCAATGGTGCAAATAAGCGGATTGAATTTCAGATGGCCAGAAAAAGAGGATACTTTGTGGTATTCTGTAGAGCAAGTTATTTCTAAAATTGGAACACCGAAACAGGTTAACTCCAGGGGCAGTTACCATATACCCGAAATGACTACTTATGAATAa
- Protein Sequence
- MQQALLAVKQNNVSVKSAAKHFSVPKTTVHYKVTGKYPEKRQMGPKTNLLQEEETNIVDWMFKSADRGFPITKSQLLDSVQMQSTGVYNRRGLDAVLTDLKDYTYVLEDPSRVFNVDETAIFLAPKGERTLVCKGEKSVYSFTSNDEKECLTCLIGSNALGQLMPPMVVFKYERVPSAIISEMPNHWAFGRSESGWMTGETLFEYVANIFHPWLINQKIMLPVVLFVDGHSSHLTYCLSQFCSENGINLGALHPNSTHIIQPMDVAVFRPLKEHWRQAVHSFKVKNLGAKLKRENFAPLMDSVLKQLKPESFINGFRRCGLYPFDKNAVNLDKIARFENNDLENGDTSLYLLWKKLKEDCGFEPNTRTGNTEINNDFEESSIQESEKQISDEAGNTEINNDFEEYQALEKQISDEAGNTEINNDFEESSIQEVEKQICDEAGNIEISSDKTEQRELTSKKEQSKVENNSISETTNQEISPSRHLYTTVKSAAKHFSVPKTTVHYKVTGKYPEKRQMGPKTNLLQEEETNIVDWMFKSADRGFPITKSQLLDSVQMQSTGVYNRRGLDAVLTDLKDYTYVLEDPSRVFNVDETAIFLAPKGERTLVCKGEKSVYSFTSNDEKECLTCLIGSNALGQLMPPMVVFKYERVPSAIISEMPNHWAFGRSESGWMTGETLFEYVANIFHPWLINQKIMLPVVLFVDGHSSHLTYCLSQFCSENGINLGALHPNSTHIIQPMDVAVFRPLKEHWRQAVHSFKVKNLGAKLKRENFAPLMDSVLKQLKPESFINGFRRCGLYPFDKNAVNLDKIARFENNDLENGDTSLYLLWKKLKEDCGFEPNTRTGNTEINNDFEESSIQESEKQISDEAGNTEINNDFEEYQALEKQISDEAGNTEINNDFEESSIQEVEKQICDEAGNIEISSDKTEQRELTSKKEQSKVENNSISETTNQEISPSRHLYTTDVKKRQLKELMPSVISGEKGKKYFKKKENERERKELEKENRKKKREEVKVLKERDKAERKRKLEEKRQTRLKQIEKKRNMKRKHITASESSDSSVEMTSESEGEGDNWDQPPSDTTEENDEHTISVKDHVKKDDFVIIAYDNKYYPGQIRKINRQRKTYLVSSMVQISGLNFRWPEKEDTLWYSVEQVISKIGTPKQVNSRGSYHIPEMTTYE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -