Basic Information

Insect: Philopedon plagiatum
Gene Symbol: clz9
Assembly: GCA_963971165.1
Location: OZ020192.1:28730081-28732150[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 4.4e-08 5.2e-06 28.5 0.0 8 38 23 52 19 58 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	4.4e-08	5.2e-06	28.5	0.0	8	38	23	52	19	58	0.89

Sequence Information

Coding Sequence: atgccAAAGGTAAAAAAGGACAATAAAacttatacaaaaaaatacactgAAGTTGATGTGCGTAATGCGTTGGAGGCAATTAAAAATGGCCTAAGTCAAAGAAAGGCTGGCGAACAATTTAATGTACCAAGAGCGACCCTTCAATTTAGGGTAAGTGAAAAATTTAACGACAAAACCTCCCACGGTCCAAACCCTATTCTTTCGGTAGATGAAGAAAGACAGCTAAAAGCATGGATCTTTGCATGTCAAAGAAAGGGATTTCCGCTAAGAATTGATGATGTTAAAGAATCAGTTAAAGGTTTTTTGGACGCTTATCCCCGTGATAACCCATTTTCGGAAAACAGACCAGGAAGAGGATGGTATAAAGCGTTTCTACAACGGCATCCAGATATAGTTCTACGAACTCCAGAGTCCATTACAGCCGCAAGCtcaaatatttctgaaaaggACATTCGGAAATGGTTCGCTGGGATTGAGGATTATCTAAATGAAAAAGGATATAGTGACGTACTTAAAGACCCTTCACGTGTTTTCAATGGTGACGAAACTTGCTTCCTCCTCTgcccgaaaaataaaaaagtgctaGCCGTAAGAGgaagcaaaaatatttatgaaattgaGCATAATCCTAAAGTGAATTTAACTGTCATGTTCACATTTTCGGCTGCAGGAGAAACAACACCACCTATGATTATTTACCCTTACAAAAGATTACCGTCAGAGGTTTTGAAATCGGTACCTGATAACTGGGGTATAGGGTGTAGCGACTCAGGATGGATGAAGAacgaaaatttttttgaatacATTGGAAATGTTTTCTATAAGCATTTGGTCGCCAAAAATACTACATTTCCAATAATATTATTTGTGGATGGACATAAAACCCATCTCACGCTTCAAACTAGTCAATTATGCTCTGATTTAAACATAATATTGGTAGCTTTGTACCCAAACGCTACCAGAATTATGCAACCAGCAGACGTTGGTGCATTTAAACCTCTTAAAAATCATTGGAATAAGGCGGTCCTAGATTTTAGAAGAGAAAACCCCAACGCTGTTGTTACAAAGGAAAACTTTGCGTTGGTATTAAACGCAGCACTTATTCAGTTAAAATCAGAGTGTGTCATAAATGGATTCAGAGCTTCAGGACTGTTTCCATGGGATCCCTCAGGAATTGATTACTCGAAATGTCTGGGAAAGGTTACCAATGAAGTTCAAGAATGCCAAGAAAGTATAGCAGATGGTGTTACAATAACGTATActgattttgtaaaaataattggaaaggaaaagataaaaaaatttcaaagcgCAAAACAATTTAAAGGCCACAATGAAGATTCGCAGTTGCTTTACAGTTTATTtgcagtttttaaaaacaaatcgaatataccaGGTAACACACAGACTTTTGATATAGAGGACATTCCTATTATAACAGATGGCCACCTTTTACTAGATAATGCTGCAGAAACAGTTTCATCTCCTACTGTAATTAATTATCAagacaatttattaaataattcagAAAAACCAGCTTCCAGTGTCGAAATACCTGTTATATCAGAAGACCACGCTATAAGAGAGATCTCTTCTCCGACTGAAAAATTTCAACATCAGTTTAGTCAATTTAAACACCAAACATCTAATAAAACTGGATCAACATCCTTGGGATTGCCTCCAGATGCCAATACATCTCTTACTAACTTCTTTTTTTGGCCAAAAACTCCAGAAAGAAAGGGTAATAGGAAACAAGCCGAAAAATTATCTTTTGTGCTTACCTCTTCAGCGCGTAAAAAtgcagaaaaacaaaaaaaagaatttaagttAGAACAAGAAAGAATAAGGGAAGAAAGgaaacaaaaaagaaatgaaaaattaaaaattaatcttgaaaaatgcaaacaagcaaaattaaaaaaaaataaaagtaatattaaGAAAAAGGAAATACTCTCTAAGAAAAGTGAAACTGTCACTACGAAGAAGAACAATAATCAAACCGAAGATAAACCCATTTTAAAAGAATCTGTTAGTATGGAGAATAAAATAGACAGACTTTTGATATAG
Protein Sequence: MPKVKKDNKTYTKKYTEVDVRNALEAIKNGLSQRKAGEQFNVPRATLQFRVSEKFNDKTSHGPNPILSVDEERQLKAWIFACQRKGFPLRIDDVKESVKGFLDAYPRDNPFSENRPGRGWYKAFLQRHPDIVLRTPESITAASSNISEKDIRKWFAGIEDYLNEKGYSDVLKDPSRVFNGDETCFLLCPKNKKVLAVRGSKNIYEIEHNPKVNLTVMFTFSAAGETTPPMIIYPYKRLPSEVLKSVPDNWGIGCSDSGWMKNENFFEYIGNVFYKHLVAKNTTFPIILFVDGHKTHLTLQTSQLCSDLNIILVALYPNATRIMQPADVGAFKPLKNHWNKAVLDFRRENPNAVVTKENFALVLNAALIQLKSECVINGFRASGLFPWDPSGIDYSKCLGKVTNEVQECQESIADGVTITYTDFVKIIGKEKIKKFQSAKQFKGHNEDSQLLYSLFAVFKNKSNIPGNTQTFDIEDIPIITDGHLLLDNAAETVSSPTVINYQDNLLNNSEKPASSVEIPVISEDHAIREISSPTEKFQHQFSQFKHQTSNKTGSTSLGLPPDANTSLTNFFFWPKTPERKGNRKQAEKLSFVLTSSARKNAEKQKKEFKLEQERIREERKQKRNEKLKINLEKCKQAKLKKNKSNIKKKEILSKKSETVTTKKNNNQTEDKPILKESVSMENKIDRLLI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01187431;
90% Identity: iTF_01187675;
80% Identity: -