Basic Information

Insect: Philopedon plagiatum
Gene Symbol: JRKL
Assembly: GCA_963971165.1
Location: OZ020194.1:54776109-54778218[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 8.7e-09 1e-06 30.7 0.0 1 37 15 51 15 56 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	8.7e-09	1e-06	30.7	0.0	1	37	15	51	15	56	0.94

Sequence Information

Coding Sequence: ATGCCACGAATTCGTAAAAGAACCACTACAAATCGGTCATTTTCCGAAGAAACATTAAAGCTGGCCGTACGAGAAgtgatagaaaataaaatggcaGTTCGGAAAGCAGCAAAAACATTTCGTATACCAAGGACAACACTTAAAAGATTTAAAGCTAAGGTAGAAAATGTTGGATTTGAGCAAGTGAATTTTAGTCCAAGAAATGAACatttaaaggttttttcaatCGCTCAAGAGGAAGCACTTGCTCAGTACTTAAAACAAGCTTCTATGATGAATTACGGGTTAACCCTTAAGGAAGCACGTAAACTTGGTTATGACTTCGCCAtagctaataaaaataatttacgaaAAGGTTTAGATAATTGGAACAAAGATATGATGGCTGGAAAAGAATGGATACTCTCTTTTTTGAAAAGGCACAAGCTTTCCCTCAGAACACCAGAGCAGACTAGTTTAGGTAGGGCCACCAGTTTCAACCGCCACAATGTTGCAAAATTCTACGAAAATCTGAAAGTAGTTTTAGATGCTAATAAGCTTGAGCCCCAAGATATTTACAATCTGGATGAAACAGGTTGCCTTACTGTTCACAAACCGCCAAAAATTATTGCAGCGAGAGGTGCCAGGCAAGTAGGACAAGCTACTTCCGCAGAAAGGGGAACCCTAGTTACTCTATGTGCTATAGTTGGATGTACAGGTAGAGCTCTCCCCCCATATTTGATCTTCCCGAGGAAACATTATAAAGAACATATGTTGAAAAATGCACCAGTTGGAAGTAAAGGGAGTGCAACACCGTCAGGCTGGATGCAAGGTGAATTATTCGAAGATGTTTTAAAGCATTTCGTTAGGTGCGAACGACCTAGTCTAGAAaaaccaaaattaattttactcgaCAATCATGAAAGTCACCTTAACTTAAAGGCTTTAGATTATGCAAAGCAAAATGGCATAATTTTACTGACATTTCCTCCGCACTGTAGCCATAGACTACAGCCATTAGACATATCAATATTTGgcccttttaaaaaatattataattatgcCTGCAATAAATGGATGACCAACCATCCTGGTAGTGTCATAACAATTTACGACGTTGCTGAACTGGTAGGTGACGCGTTTCCAAAGGCATTTACAGTTCAAAACATAAATAGTGGTTTTGCCAAAGCTGGTATATATCCCTTTAATGATGATGTATTTACAGACGCTGACTTTCTACCATCCTATGTAACAGACCGTTCCTTAAATGATGAAACCCTTGTTTCATCCGTAAACGTAAATATACAAACCATCCTGTCTCCAAATGAAAATTCTGATACAAAACCTGGCTGCTCATTCCACAATaatataaaagaaacaaaaatggCTACAGACGCTCTGTCAAACCCAAATACAGAGGTTCAGTGTGGATCTTCTCTAGAACCAAACTGTGCTTCAAACGTAGGAAGTCATATTAGTATTTTAGAAAAACAGCTTGTTCTTCCCGAAGTTATAAGACCATTTTTGAAAGCACCGCCCAGAAAAATAAAGGCTTCAAGTAGGCGAAAGGGTAAATCAATGGTCTTAACTAGTACTCCTGTAAAAGAAGAACTTGAAGAAAGAGCAcaagaaagaaaaactaaagCAGAAAAGAAAAAGACTGTTGTGCGTAAGGTTCTACAAGCATCCTCATCTGAGTCAGGAGAAGAACCTCATTATGAAGATTCTTCTGAATGGGAGGAAGAAGAAGAGAAAACCGAAGATGTAACAGTTTCTAGACAAGCAAAAGATTACAATAAAGGTAATTTCTTAATAGTTAaggtacatggaaaaaaatcCTTCAGGAATTACGCtgcagaaataataaataaagtttacaaTGGGTACAATGTTGCGTTTCTAAAAAAGCAGCATCCATCCAATCGGTTTAAATACTCGGAGGAGGAGCCTAGTTTTATTTCATATGAAGACATAGTTTGTGGTCTACCAATACCTACTAAATACTCAAGAGGTCGATATGagaatttactttattttaactCTGATATGTCTGAATTCAGCGTACAATAA
Protein Sequence: MPRIRKRTTTNRSFSEETLKLAVREVIENKMAVRKAAKTFRIPRTTLKRFKAKVENVGFEQVNFSPRNEHLKVFSIAQEEALAQYLKQASMMNYGLTLKEARKLGYDFAIANKNNLRKGLDNWNKDMMAGKEWILSFLKRHKLSLRTPEQTSLGRATSFNRHNVAKFYENLKVVLDANKLEPQDIYNLDETGCLTVHKPPKIIAARGARQVGQATSAERGTLVTLCAIVGCTGRALPPYLIFPRKHYKEHMLKNAPVGSKGSATPSGWMQGELFEDVLKHFVRCERPSLEKPKLILLDNHESHLNLKALDYAKQNGIILLTFPPHCSHRLQPLDISIFGPFKKYYNYACNKWMTNHPGSVITIYDVAELVGDAFPKAFTVQNINSGFAKAGIYPFNDDVFTDADFLPSYVTDRSLNDETLVSSVNVNIQTILSPNENSDTKPGCSFHNNIKETKMATDALSNPNTEVQCGSSLEPNCASNVGSHISILEKQLVLPEVIRPFLKAPPRKIKASSRRKGKSMVLTSTPVKEELEERAQERKTKAEKKKTVVRKVLQASSSESGEEPHYEDSSEWEEEEEKTEDVTVSRQAKDYNKGNFLIVKVHGKKSFRNYAAEIINKVYNGYNVAFLKKQHPSNRFKYSEEEPSFISYEDIVCGLPIPTKYSRGRYENLLYFNSDMSEFSVQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01187340; iTF_01187345; iTF_01187346; iTF_01187347; iTF_01187348; iTF_01240198; iTF_01240193; iTF_01240194; iTF_01240195; iTF_01240196; iTF_01240197; iTF_01240199; iTF_01240200; iTF_01240201; iTF_01240202; iTF_01240203; iTF_01238636; iTF_01238638; iTF_01238639; iTF_01238640; iTF_01238641; iTF_01238642; iTF_01238643;
90% Identity: iTF_01187345; iTF_01187346; iTF_01187347; iTF_01187348;
80% Identity: -