Ppla054913.2
Basic Information
- Insect
- Philopedon plagiatum
- Gene Symbol
- -
- Assembly
- GCA_963971165.1
- Location
- OZ020193.1:27080902-27082820[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.6e-08 1.8e-06 29.9 0.1 1 39 14 51 14 56 0.89
Sequence Information
- Coding Sequence
- atgccAAACTACAAAGCCAAAGGTCTGCGAGGGACATGGTCGGAAGAAAATCTTCATGCTGCTGCTCAAGCGGTTGCTGAGGGATCATCCATTAGAAAAGCAGCAAAAGCAAATGGAATCCCTGAAAAAACTTTGCGCCATCgtttaaaatcaaacaatctCGTCAAGGGCAAACTAGGACAACCACCAGTACTTGGCTGGGAAGCAGAGAAAAAAATCGTTCTGCACGTGAAGAGACTACAAAAGGCTGGATACGCCCCGACCAAAACTGCTTTGCGGAAGATGGCATTTAATTTGGCGGAGAAAATGGACATAGTTTCagcaacacatttttctgagaCAACCCGCTCTGCGGGCAAGGGGTGGCTTAAAGCTTTTCTTAATCGAAACCGTACTCTAACAATAAGGAAAGCGCAAGGGGTGTCCAAGGCTCGAGCTGACGGAATGAACAAACAGGAGGTCACCGAGTATTTTGCGCTTTTAGAAAGAACTCTTGCAGAATATAGCTTATTTAATAAACCTGCTAATATATACAATGTTGATGAAGCGGGTCTCCAACTTAACAACCCACCACAACATGTTGTAGCTGCGAAAGGAAGTAAATCTGTTCAAGCTCGACAATCTTCAGAGCAAGGGGAAACCATAACCGTAGTTGCTTGTTCCAATGCTGAAGGGACTTTTCTACCTCCCTACATTATATTCAAGGGTGTTAACAAGCAGCAAGCATGGCTAGATAACCTGCCTAATGGGGCAGAGCTGGTAATGGGAGGGAAATCTGCGTACATAAACGAAGAACTTTTCTTAAATTGGCTAGAAAATCACTTCATTCCAAGAAAATCAGCGGGTCCTTGTTTACTCTTGCTCGATGGACATGGATCGCACACGAACTCTCCTGAAATTCTAGAAGTAGCGCTACAAAATGACGTGCATTTCCTTTGCCTTCCTAGCCACACCACCCATTACCTGCAACCCCTCGACCGTGCTTTCTTTAAGCCACTAAAAACGTACTACCGTAATGCAGCTATTGAGTGGGGTGTTGCAAATCCTGGAAAGAAATTAGAGCGCAGACATTTTGGTCCACTTCTAGAGAAAGCCTGGTCTCAAGCTTCAACGACATCGACTGGATCAGCAGGATTTCGAGCTTGTGGAGTATTTCCATTTTCACCATCGTTCCAGAGTAGTCCCAACCAAGCATCCAAGAGTCCAGAAATTCCCGCATTGACAAGACCTAGCACATCAAGAAGTCCTGAGAAAACACTCAAGAGTCCTGAATTTCCCGCATTAACTCCATCCAAAGTACTTGATATCGTATCCCCAATACCAATAGCGTATCCCTCACAAGTAAAAAGGAAGCAACATGCTCAAGTGCTGACCACTCCTGAAAATATCGCCAACAAAAAAGCTAAGAGGGATGCAAAAACTGAAAAGCAGAACAAGCGAGAGAATAAGTCGGTGGTTAAGCTGGTTCGCAAGCCTTTCAAGAAACGAATTGCTTTCGAAGATGGACTACCTTCATCGTCCGGAGGTGAGTGGGATGAAGATTCATCTCATGATGAACATGAAGTCGATGAAACCGACTTTTTCGAAATTGTCTGTAGCGTTAATGTCGACGACTACATTTTAGTACAGTTCGTCGGAAAGGTAAAGCCGTTGTACTACATTGGTATTGTTACGAAATGTGAAAACCAAGAAGTAACTGTTAATTTTATGAAGAGGggaaaattgcagtttattttcCCGCAAGCAAAAGATGAGTCAGTCATTCAAATGGAAACAATCAAAAAAATACTGCCACCTCCATCCGTACGTCGTGGGCACTTCACATTCAACGTTAAATTTCCGAAAACTATTACAGTTgtctaa
- Protein Sequence
- MPNYKAKGLRGTWSEENLHAAAQAVAEGSSIRKAAKANGIPEKTLRHRLKSNNLVKGKLGQPPVLGWEAEKKIVLHVKRLQKAGYAPTKTALRKMAFNLAEKMDIVSATHFSETTRSAGKGWLKAFLNRNRTLTIRKAQGVSKARADGMNKQEVTEYFALLERTLAEYSLFNKPANIYNVDEAGLQLNNPPQHVVAAKGSKSVQARQSSEQGETITVVACSNAEGTFLPPYIIFKGVNKQQAWLDNLPNGAELVMGGKSAYINEELFLNWLENHFIPRKSAGPCLLLLDGHGSHTNSPEILEVALQNDVHFLCLPSHTTHYLQPLDRAFFKPLKTYYRNAAIEWGVANPGKKLERRHFGPLLEKAWSQASTTSTGSAGFRACGVFPFSPSFQSSPNQASKSPEIPALTRPSTSRSPEKTLKSPEFPALTPSKVLDIVSPIPIAYPSQVKRKQHAQVLTTPENIANKKAKRDAKTEKQNKRENKSVVKLVRKPFKKRIAFEDGLPSSSGGEWDEDSSHDEHEVDETDFFEIVCSVNVDDYILVQFVGKVKPLYYIGIVTKCENQEVTVNFMKRGKLQFIFPQAKDESVIQMETIKKILPPPSVRRGHFTFNVKFPKTITVV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01187357; iTF_01187355; iTF_01187356; iTF_01187358; iTF_01187424; iTF_00196112; iTF_01243473; iTF_00196120; iTF_00196121;
- 90% Identity
- iTF_01187355;
- 80% Identity
- -