Ppla033681.1
Basic Information
- Insect
- Philopedon plagiatum
- Gene Symbol
- -
- Assembly
- GCA_963971165.1
- Location
- OZ020191.1:47270506-47271339[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.4e-14 9.8e-12 46.8 0.0 6 43 23 60 18 61 0.91
Sequence Information
- Coding Sequence
- atgccaagaatatataaaaaaaagttagggCCACGAGGAAAATGTAATTACAATCCAGAATATGTTCGCCGAGCAGTGGCAGCGGTTCGACGAGGTGATATGTCTATGAGACAAGCTGCAGAACAGTTTGGTGTGCCTTTTAGCACCATACAAAGAAGGTACCATGGAAAACACCCCTTGAAGTATGGCCGGCAGGCTGCACTTAGCGATACTCAGGAGCTTAGGCTGAAGGAGACACTCCAACTTTGTGCTGAATGGGGATTTCCTTTAAAAAGTACAGACGTCAGGACAATtgtacaacaatattttaatagcCTTGGAACGACGGAACCAAGATTTAAAGACAATATGCCTGGGATGGACTGGTTTAAGAGTTTTATGAGCAGACATAGAGACCTTACTGTTAAATTGACCGAAAATACAAAGCGCGTTAGGGGAGCATTAACTTATGAAGTCATtcaagaatattttgaaaatttgcggTGCACGTTGACAGATATTCCGGCGCAAAATATTGTGAATTACGATGAGACCAATTTTGTGGATGAGCCCGGGTCAGCTAAAGTAATAACCAGAAGAGGTGCAAAGCATACACATAAGCTAATCGACTCCTCAAAAAGCAGTACAACTGTCATGTTTGCCATTGCTGCAGATGGGACATTACTCCCTCCCTACGTCGTATACAAGGCAAAACATTCCTATGAAGGGTGGACAGAGGGGGGTATTGAGGGCGCTAGATACAACCGAAGCATGAGCGGATGGTTCGACTCAGAATTATTCGTAGACTGGTTTAAAACAATTGTTATTCCTTATTTTAGAAAACTAGCTggctaa
- Protein Sequence
- MPRIYKKKLGPRGKCNYNPEYVRRAVAAVRRGDMSMRQAAEQFGVPFSTIQRRYHGKHPLKYGRQAALSDTQELRLKETLQLCAEWGFPLKSTDVRTIVQQYFNSLGTTEPRFKDNMPGMDWFKSFMSRHRDLTVKLTENTKRVRGALTYEVIQEYFENLRCTLTDIPAQNIVNYDETNFVDEPGSAKVITRRGAKHTHKLIDSSKSSTTVMFAIAADGTLLPPYVVYKAKHSYEGWTEGGIEGARYNRSMSGWFDSELFVDWFKTIVIPYFRKLAG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00115632; iTF_01187007; iTF_01515492; iTF_00115624; iTF_01516650; iTF_01516649; iTF_00755454; iTF_00755499;
- 90% Identity
- iTF_01187007;
- 80% Identity
- -