Basic Information

Insect: Philonthus spinipes
Gene Symbol: Rreb1
Assembly: GCA_963082785.1
Location: OY720323.1:2128271-2142813[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0007 0.11 14.3 1.0 1 23 92 114 92 114 0.96

2 15 0.00015 0.024 16.4 0.4 1 23 128 150 128 150 0.98

3 15 2.3e-05 0.0036 19.0 6.2 1 23 156 178 156 178 0.99

4 15 0.00029 0.046 15.5 3.5 2 23 264 286 264 286 0.97

5 15 0.018 2.8 9.9 0.4 1 21 331 351 331 352 0.93

6 15 0.013 2.1 10.3 0.2 1 23 471 493 471 493 0.98

7 15 7.5e-06 0.0012 20.5 0.7 1 23 502 524 502 524 0.99

8 15 0.00094 0.15 13.9 3.1 1 23 530 553 530 553 0.97

9 15 0.00081 0.13 14.1 2.8 1 23 1171 1194 1171 1194 0.96

10 15 0.00056 0.089 14.6 0.4 2 23 1388 1409 1387 1409 0.97

11 15 0.14 23 7.0 6.3 1 23 1415 1438 1415 1438 0.97

12 15 0.88 1.4e+02 4.5 4.6 1 22 1465 1487 1465 1489 0.88

13 15 6.2 9.8e+02 1.9 5.5 1 23 1538 1561 1538 1561 0.84

14 15 0.019 3 9.8 0.4 3 23 1607 1627 1605 1627 0.93

15 15 0.0085 1.3 10.9 5.9 1 23 1633 1655 1633 1655 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0007	0.11	14.3	1.0	1	23	92	114	92	114	0.96
2	15	0.00015	0.024	16.4	0.4	1	23	128	150	128	150	0.98
3	15	2.3e-05	0.0036	19.0	6.2	1	23	156	178	156	178	0.99
4	15	0.00029	0.046	15.5	3.5	2	23	264	286	264	286	0.97
5	15	0.018	2.8	9.9	0.4	1	21	331	351	331	352	0.93
6	15	0.013	2.1	10.3	0.2	1	23	471	493	471	493	0.98
7	15	7.5e-06	0.0012	20.5	0.7	1	23	502	524	502	524	0.99
8	15	0.00094	0.15	13.9	3.1	1	23	530	553	530	553	0.97
9	15	0.00081	0.13	14.1	2.8	1	23	1171	1194	1171	1194	0.96
10	15	0.00056	0.089	14.6	0.4	2	23	1388	1409	1387	1409	0.97
11	15	0.14	23	7.0	6.3	1	23	1415	1438	1415	1438	0.97
12	15	0.88	1.4e+02	4.5	4.6	1	22	1465	1487	1465	1489	0.88
13	15	6.2	9.8e+02	1.9	5.5	1	23	1538	1561	1538	1561	0.84
14	15	0.019	3	9.8	0.4	3	23	1607	1627	1605	1627	0.93
15	15	0.0085	1.3	10.9	5.9	1	23	1633	1655	1633	1655	0.98

Sequence Information

Coding Sequence: ATGCAAGGATCGGTTTGCATGCCACCGAGACAATTTGGCTGTAGCAGCGTCCAGGACGAAGACGACGACGACAAACTTAAtgaaGAAAGAATGGATTTAACCGCCGAACCGATCGCACTGACGACCACCGCCTCCCCCGGCAGCGACGCCGCGAAGATGAACCACAACCAAACCACCGACTCGGGGATCTTCTCATCGTCAGCGGCCACCCTCAACGAAGCCGAAAACGACTCGGGGGACAACCGCTCCGAGTGCAGCACCCCCGACCGGAAATACCTGTGCCCGATCTGCGAGACGATGCTCACCTCCCAGCACGAGTTCACGCTGCACATCCGCTCGCACAACAACAACGACGGAGAGACGCAGGACGCGGAGCGCGGATTCACCTGCAGGATCTGCCAGAAGGTGCTCAGCTCGAGTTCCAGCCTGGACAGGCACGTCCTGGTGCACAGCGGCGAGAGGCCGTTTACTTGCAAACACTGCGGGGACACTTTTACAACCAACGGAAACATGCACCGGCACATGAGGACGCATAAGGCGGAGAATTACGAATCGGATGGGAGTACTGATAGCAACAACAGCGCCGGCTCGAAAGGGGttgagtttaataataataaagtcgaGAAGAGGAGGAGTGAGGATGAGATTTGCGGCTCGGCGCGGAAGAAGCTGCGTTTGGATAATCAAAACGAGGCTTTGTTCAAATGCCCGATTTGCGAAAGGGATGATTTTCTTAGTGTGAAATCCCTGGAGATGCACTTGGAGGACAACCACCCGGATTACCCTGCGAAATGCCACGATTGCAATAAGGTTTTTAAGAACAACAAAACCTTGGGGATGCACCGGAGTACGGTGCACGCGGACGAGAATGGAAAAGTGCTGCACGGTTTTAAAGACCTCACTTTCGTGGATTTCAGCAGTGAAAAATTCCCCCACATAGCTCGCTACGAGTGCGAGAAGAATTTACACAAAGCCGCCTCGGGGATTAAATTCCAATGCACAAAATGCTCGCGGGCGTTCCCATCGGATCGCACTTTGGAAATACACTCGAAGAGTTGCGGCCTGCTCGATTTAACGGTCTCCAACGAGGGTGGTCTGGATTTGAAATCGCGCGCCCGGGAAGGGGATATGCGTCGCAGCGATTTCTTCTCGCGGCTCGATCTACAAGACAACTCCCCGCAATTTCTCGAAAGCCCGAAAAAGCTCCAGCAAAAACTCCTCGAAACGGTGAAATCAATCGACGGAAGCAAAGATTTAGCCGACATACAATCCATCATCTCGATGACCACAAACGGTAGCATTCTACAGCACCTGCAAGCGAAAACAGCGGAAAGCGAGGAGAAAACTGAAGAAGAAGAATCGCAGGACGTTTTCGCTCAGGAATTCCGCAAAATGAAACTCCGCGGGGAATTCCCGTGCCGGTTATGCACAGCAGTTTTCCCAAACCTGCGCGCTTTAAAAGGACACAACAGGACTCACCTCAACAGCACCAACAACGGAACGTACCGGTGCAACATGTGCCCGCACTCCTCCGTCGATAAAGCCGCTTTAATCCGGCACATGAGGACGCATAATGGGGACCGCCCTTACGAATGCTCGCTTTGCAATTACGCGTTCACCACCAAAGCCAACTGCGAGCGCCACTTAAGAAACCGCCACGCTAAGAGCACGCGGGAAGAAGTTAAAAAATCCATAATCTACCACCCATCTGAGGATCCTACAAATGAGGATATAAGCAGGCAGTTGGAGGGGGGGAAGAAACTCCCGGTTCAGGAAATTAGCAACGAGCAGTTGGGGGAGAAATCCGCGGGGAAGACTTTGACGCCCGCTTTTCCCGACTTCGCGAAAATCCCCGAGGATTTTTCCGCACTTCAGATGCTGAAGCAAATCAACAAAACAACCCAGCGTTTCGGAATTAGCGATTTGATCGGGGAGAATCTGAAGACGCAGGATTTTTTGAAGTCCTTGCAGAAACACGAGGGTTTCGTTAAGATGTTGCAGGAGCAACGCCCCGACGAGGGTTTCGTGAAGATGCTCCAAGAACAACGCTCCGGTGAGAGTTTCGTGAAGATGCTCCAAGAACAACGCTCCGGTGAGGGTTTCGCGAAGATGCTCCAAGAACAACGCCCCGGGGAAAGCTTCGCGAAAATCCTGCAAGAACAACACGCGGGTGACAATTTCGTTAAGCTGCTGCAAGAGCAACGCCCCGTTGAGAATTTCGCGAAACCCCCGCCGAAGAACCCCGAGGATTTCGCAAAACCCGGCGAGAGCTTTTTGAAGAGCTTGCAGGAACAACAGAGCAacgaggatttttttaaatcgctgCAAAAAAATTGCGCTGACGAGGATTTCGTGAAGCTTCTGCAGAAACACTGCAGCGAGGAGGGTTTCATGAAAACGCTCCAGGAATTGGGTTGCGCGAGGACCGGGGAGAATTTCGCGCGGTTTTTACAGGAAAACTGCGGCAACGACGCTTTCCTGAAGACGCTCCGGAATCATTGCATCAAAAGCGAGTTTTTGAAAACCCTCCACGAACAAAACACCGGCGAGGATTTCGTGAAATTGCTGCAAAAAGACTTGGCGAAGGAAAGTTTCGCGCTTCAGGAACAACGCATGAAGACGCTGCAAGAACAACAAGCTGGAAAAGCGTTTTTGGAGCAGCAAAACGagggatttttaatgaaaaatttgcAGGAGCGCAACGCCGGGGAATTCCTGCTGAAGCAAGAGAGTTTCGTCAAAGCGGACTTAGCGAAGACGCTGCAGAAAAAACACGAGGACTTCACGAAGACTCTTCAAGAGCACTGCACCAACGAGGCGTTCGTTAAATCCCTGCAGGAACAACAGCTGAACAACAACGAGGGTTTCGTGAATTACCAAACATCGACGCCGCAGAAGCAGGTGCCGAAAATCCAGGTGAAAAACCTGCGCGCGTTGAAGGAAATCCCCGAATCGGAGACTGAGGAGGAGGAACCGATGGATTTGAGCAAGAAGAAGCGCGAGGAAGTTAAAGTCGAGCCGAAACAAGTGGCGGAAGCTCCGAATTTACAAATGACCGATATTCTAGCGCAGCAGCTTTTGAAGAACTCCCCGAAAATCGATCCCGCCGCACTTTACGCCCCCCAGCTGGCGTTCTACAGGAATTCCTTCCCTAACTGGCCGGCGTTTCCGTTAAATCCCCTTTTATTCCAACCCCCGATGCTCCCGCAGGATCCGCAAGAAATAAAAGAGAGGTTGCAAAGGTTGCAGCTGTGCGGAGGGGGAATGGTGATGGATTTCGCTGAACGGCTTAAAACTTTCTATCCTCCAATCCCTAATTTCGGCAACGAGAGTCCCGTGAGTAAACCCCCTGAAGAAATAAAGCCGCTtagtttaaatttagaaaaaccaACCCTCCCTTCCGCGAAAACAGCCGAGCTGCTTCAATCCCCGAATTCCGTAAAGATGGTTATTAAAAACGGGGTTCTAATGCCGAAACAGAAACAACGCCGCTACCGCACCGAGCGTCCCTTCAGTTGCGAACACTGCTCCGCTAGATTCACCCTGAGATCAAACATGGAGCGCCACATCAAGCAGCAGCACCCGCAATACTGGTCGCAGCGGCAACGCTCCTCCGTGGGAAACCCCGGAAGAAAACCCCAACTCCTCTTAAAAAACAACCTGTGCGAAATCAACGTCCCCAATTACGAACCCGCCAAACCGCAAGAAATCGAAGAGACAACCCCGAACAACCTAATTTCCGACAAACTGAAATTCGCCATCCTCGCGCAGCACTTGCGCGCGAATTCCCAAGAAGCTAAAAAGGAGGAGGATGAGGAATGTGCGTTGGTTATCGATGAGAATGAGGACGAGAGGAAGGTGGAGGTGACGTCGCCGAGGATCTACGAGGAGAAACCGCGGCCGGTCAAGGGGGAAGAGGGGCAGGATCTGGTGCCGGTTTCCAGGCTGCTCGACAACGCCTCCAGGCAGCCCTTCAGGGAGTACTTCCGCGAGGAGAACGAAACGGGCGCAATTAGCGAGGAGGATGAAGAGGGCTTAGTGGCCAGTGGAAGCACCAGCGAAGGGAATTCCGGCACTGATGAAAACAGaTCTGAGAGTGATAACGCGACGAACCAACCCTTAAAGAAGAAATCCGCGTACTCGTTGGCGCCGAACCGGGTGAGCTGTCCGTACTGCAGCAGGAAATTCCCGTGGACGTCCTCCCTGCGCCGGCACATCCTCACCCACACCGGCCAGAAGCCGTTCAAATGCAGCCACTGCCCGCTCCTCTTCACCACCAAATCAAACTGCGACCGGCACCTGCTGAGGAAGCATGGAAACACCGCGACGACGATCTCGAACGAGAGTAGTAATAACAACAACTTCATGATGAGGAATGTCCCGGAAAGGCCTTTTAAATGCTCGAGCTGCCCGAGCAGTACATTCTCGACGTACTCGAATTTGAAGAAGCATAAGGTGCATAAACACGGGGTTCAGGATGATAGGCAGGGGTACGAAGCGGGGAGCTCGGAGGACGAGAAGAATAACAGCGATCAGAAGAGCGATTGGGAGTCGCAGATTTCGCACAAGATTAATTCGGAAGGGCAGGTTTCAAACAATTCGGATTTGCCGTTCAAGTGCCATCTCTGCGATCACTCTTTCGGGGAGAGGCAGGACTGCCTGGACCACATTAAAGACAAACACGCTTCGGAATACGATCTGCTGATGTCGAAAAACGCGCTCGACGCGAACGCCTCGACGCCGGACGAGGGGAACCACGATGACGAGGAGAACGAAATCAGGGGGAAGTTTCCCGATTACTCGAACAGGAAGGTGATTTGCGCCTTCTGCATGCGCCGGTTTTGGTCGGCGGAGGATCTGCGGAGGCACATGCGGACCCACACGGGGGAGCGGCCCTTCAGCTGCGACATCTGCCGGCGGAGGTTCACCCTGAAACACAGCATGCTGCGGCACAGGAAGAAGCACAACGTCCCTTTTGAAAACGATAATGCAAACAGCGACGAAGACAACTTTGAGAAAGTAAAATTggagaataataatttagttcGGAAAACCAGCGAGGATTCTGATGGTAACGAGGGGAGCGATTTGATTAGTAATTTGTTGGGGATTAGGGATAGGTCGATTATTGAGCAGGTCTTGACGGCCTCCGCGGATGACGCTGCGAAACTCTTAGGGGTTGGTGGACAAGAATAA
Protein Sequence: MQGSVCMPPRQFGCSSVQDEDDDDKLNEERMDLTAEPIALTTTASPGSDAAKMNHNQTTDSGIFSSSAATLNEAENDSGDNRSECSTPDRKYLCPICETMLTSQHEFTLHIRSHNNNDGETQDAERGFTCRICQKVLSSSSSLDRHVLVHSGERPFTCKHCGDTFTTNGNMHRHMRTHKAENYESDGSTDSNNSAGSKGVEFNNNKVEKRRSEDEICGSARKKLRLDNQNEALFKCPICERDDFLSVKSLEMHLEDNHPDYPAKCHDCNKVFKNNKTLGMHRSTVHADENGKVLHGFKDLTFVDFSSEKFPHIARYECEKNLHKAASGIKFQCTKCSRAFPSDRTLEIHSKSCGLLDLTVSNEGGLDLKSRAREGDMRRSDFFSRLDLQDNSPQFLESPKKLQQKLLETVKSIDGSKDLADIQSIISMTTNGSILQHLQAKTAESEEKTEEEESQDVFAQEFRKMKLRGEFPCRLCTAVFPNLRALKGHNRTHLNSTNNGTYRCNMCPHSSVDKAALIRHMRTHNGDRPYECSLCNYAFTTKANCERHLRNRHAKSTREEVKKSIIYHPSEDPTNEDISRQLEGGKKLPVQEISNEQLGEKSAGKTLTPAFPDFAKIPEDFSALQMLKQINKTTQRFGISDLIGENLKTQDFLKSLQKHEGFVKMLQEQRPDEGFVKMLQEQRSGESFVKMLQEQRSGEGFAKMLQEQRPGESFAKILQEQHAGDNFVKLLQEQRPVENFAKPPPKNPEDFAKPGESFLKSLQEQQSNEDFFKSLQKNCADEDFVKLLQKHCSEEGFMKTLQELGCARTGENFARFLQENCGNDAFLKTLRNHCIKSEFLKTLHEQNTGEDFVKLLQKDLAKESFALQEQRMKTLQEQQAGKAFLEQQNEGFLMKNLQERNAGEFLLKQESFVKADLAKTLQKKHEDFTKTLQEHCTNEAFVKSLQEQQLNNNEGFVNYQTSTPQKQVPKIQVKNLRALKEIPESETEEEEPMDLSKKKREEVKVEPKQVAEAPNLQMTDILAQQLLKNSPKIDPAALYAPQLAFYRNSFPNWPAFPLNPLLFQPPMLPQDPQEIKERLQRLQLCGGGMVMDFAERLKTFYPPIPNFGNESPVSKPPEEIKPLSLNLEKPTLPSAKTAELLQSPNSVKMVIKNGVLMPKQKQRRYRTERPFSCEHCSARFTLRSNMERHIKQQHPQYWSQRQRSSVGNPGRKPQLLLKNNLCEINVPNYEPAKPQEIEETTPNNLISDKLKFAILAQHLRANSQEAKKEEDEECALVIDENEDERKVEVTSPRIYEEKPRPVKGEEGQDLVPVSRLLDNASRQPFREYFREENETGAISEEDEEGLVASGSTSEGNSGTDENRSESDNATNQPLKKKSAYSLAPNRVSCPYCSRKFPWTSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNTATTISNESSNNNNFMMRNVPERPFKCSSCPSSTFSTYSNLKKHKVHKHGVQDDRQGYEAGSSEDEKNNSDQKSDWESQISHKINSEGQVSNNSDLPFKCHLCDHSFGERQDCLDHIKDKHASEYDLLMSKNALDANASTPDEGNHDDEENEIRGKFPDYSNRKVICAFCMRRFWSAEDLRRHMRTHTGERPFSCDICRRRFTLKHSMLRHRKKHNVPFENDNANSDEDNFEKVKLENNNLVRKTSEDSDGNEGSDLISNLLGIRDRSIIEQVLTASADDAAKLLGVGGQE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -