Basic Information

Gene Symbol
Sall1
Assembly
GCA_963082785.1
Location
OY720315.1:19001511-19008117[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 12 0.0007 0.11 14.3 0.1 1 23 1447 1469 1447 1469 0.99
2 12 0.00064 0.1 14.4 1.9 2 23 1472 1493 1471 1493 0.96
3 12 0.015 2.3 10.1 1.3 1 23 1499 1521 1499 1521 0.98
4 12 7e-05 0.011 17.4 5.3 2 23 1528 1549 1527 1550 0.95
5 12 0.061 9.6 8.2 0.4 6 23 1564 1581 1563 1581 0.99
6 12 7.4e-05 0.012 17.4 0.7 3 23 1588 1609 1587 1609 0.97
7 12 0.039 6.2 8.8 0.1 2 23 1625 1645 1624 1645 0.97
8 12 0.00013 0.02 16.6 1.0 1 20 1651 1670 1651 1673 0.91
9 12 0.00017 0.026 16.3 0.1 1 23 1681 1703 1681 1703 0.98
10 12 0.0053 0.83 11.5 4.9 1 23 1709 1731 1709 1731 0.98
11 12 1.6e-05 0.0025 19.5 3.5 1 23 1737 1759 1737 1759 0.96
12 12 0.0014 0.22 13.3 5.3 1 23 1765 1787 1765 1788 0.95

Sequence Information

Coding Sequence
ATGGAATCGACTGGAAGCACGTTATGCCCGGTTTGTACATTGTACCTCCGGCCGGGCATTACGCTGCAGTCCCACCTGGAAACCCATCCCAAAGATAAGGTGATTGAGGCTCTGGTGAGGCAACAGTATGTTTTACCAGCAGTTTTCAATGCACAGCAAGTGCTCTGCCAGCCGTATGTTTACCACCACCAACAGCAGCAACAGCAACAGGTTATCGTGGCAGCTACGACGTCGACATCTTCACAACAGCAGCAGCAACAAGCGCAGATTATCCCTGTAATAATGTCATCGTCGACGGTTTCGAGTTTCCTAGCGGCGGCCTCTCCATCGATTGCAGCGGCGATCCAGCAAAATGGAGAAATCCTCGATGGTTCTGGTCCGGATAACTCGCAAATGAATCAAACGGGAATGATTCCATCGAATTCCACAATGCTTGCTCATTCGAATTCTCAGTTAATGAACCCAAATCCCGCATCGCAAATGTTAAATCCTGCAAATTCCACGATGGTGAGCCCTTCGAATTCCCAGATGGTAAGTCCGTCGAACTCCCATTTGGTCAATCCTCTGAACTCGCACTTGGTTAATTCCCCGAATACCCAGTTGGTAAATCCTCCTAACGCCCAGCTGTTAAACCCTCCTAATTCCGCTCTATTAAGTCCCTTGAATATGTTAAGTCCTAACGGCCAGATGATCGTCCCCTCGAATTCTGCGATGATGTCTTCAAATTCGGGTTTGCTGAACCAACCCACGCTGGTTTATTCCAATTCAGCAATGCTGGATCCCTCGAATTCCATGTTTGGATCTTCAAATTCCTCGAATGGAGCCTTCGATAACGGAAACCCGCCAAATAGTCCCACGAATTTAATGTCTTCAAACTCTGCCTCACAGACGGTTACATCGAATGCGTCGATGTTAGGTTCTTCTTCAAATGCGCTGTTGAATCAGAATTCTTCGAATTCCACGATTTTAAGGCAACCCCCTTCGAATCCAGCGATTATTTCCTCAAATTCGGCAATGCTGTGCCAACCCAACATGATTTCTTCCAACGCCCCAATGATGGATCCAACAAACTCACTAATGTTGGTTCCGTCCAACCACAACGCGAATACTCCCTCGAGTTCCATTTCACAAAACACATACACGAATTCATCCCCGTCGAATTCCACAATGGTCACTTCAAACTCCCTCCTCGTAGCCCACGGAAATCCCCCGAATCCAACAATGATCAATTCCTCCACAAACCCCCTGATCGTCGCTCCTTTGAATTCCGCAAATCAAACAATGGACAACTCGACGATGTCAAATCCCTTACCCCAGCCCCAAATATTCCAACCACCTTACAACACCTTTATAACCTCAACCCCAAACGGTGCGGTGTTCATCTACCGTTCGAATGTTGAAGAATCATACGTAGAGGAAACCGAGGAGCTGAACAAATCGTGCCAAACCAGCGGGAATGACAACGGTGAGGAAACTTCGCCGGCGAAAAGCAGAAGAGAGGATGCAGGGACGAAAAAAGGCGGGGAAAAAATGAAGGGTGAGGAAGAAGCGGAGAGCGAGGAAACCGAAATTTTTGAATGGTGCGAGGACGAGGAAGCAGAGAAGGAGGACACCGCTCGGAGGTCGGAAGATGAAGAGGAAAAAGGCTTTGCGCAGCAGTCCGAAGAAAATCGTTACAAAGGGGAGGAGCGAATTCGAGAAGATGAATGCTTGAAGGAGCCCGACGATTTTTCATCCGGAAATTTCAACTGCATGGAGAATCCCGAAGAAGGCGATGAGAATGGAGAGCAAAGCCAAGACGGGGAAATTGTCGATTCGAAGGTGGAGTACGAAGAAACGAAAATACTCTGCGAGCAGTTGGTGACTATCGAGCAGGAACAAGTGATCGCGACTACGAAACGGGAAGAAAGACGAAACCGAAAAAACACACCGAGAAACGCTAAAAACAACATGGACGAAGAAATTGATTTAACGCAAAGCCCTCGACAACACGGCGATGACGAAAACACGCGGATTGGTTTCGATGTTATTGTTTTAAGCGGGGAAGAGGGAGACGAAGCAGAAAGCCTAGTTTCCACGAGAATACAATCGCTCAGAAAAAAACAGAACGAAGAAAAACACAAAAAGGTTTCTGTAAGAAGAAAAAGCCAGCAGAGCCTGAAAGACGTAGGAATCGTGGTTCTTGCTGCGAATAAAAACCAACAGCAACAAAGCGGAAACCAAAGCAACCGACAATTAACTCCTCCAGCTGAAGACCACGTTTACACTCCTCGTTCGCGAAGAAGACCTTCTGGCGATCAAGAACCTATGAAAATGTCGAGGAAAAAATACCGCCGGCGGCGGCGTTTGCAGGATGAAGAAACCGATGACGATACAGAAGACGAAGAGGAAGATTATGTAGCCGCTGAGCAGAGCACGACGACTCGCGTGCTGAGGAATGGAAAGTGTGTCATTTCAAAGTCTTGGATTTCATGGCGGAGGAATCCTGATATTGAAAATCAGCTGTCGAtacaaattgaagaaattgaagATCCGCCTTTAAAATCCGGTGGGAATGAAGAAGCAGATCAAGGGTCTTCGTCGTCGGGAAGCTACCGGTTGCTTCAAACGGAAGAAATAGAAGACCAGGCGATTTCGTCAACGCGTGATCTGCAGCAGCAGTTGATGGAAAATGAAGCGATTAACGTTCAGGATGTTTTGATTTTCTCGAATGGAAATGAGGGAGTAGATAAAGACAAGCAAGAACGTAATGCGTTAGACCAAAATGAAGCGATTGATGGAAAtggatttattgatattatagaGAAAAGCGATGAATCAGAAACGGAAGCTCAGGACGAAATCAATACTACGAAAATAAACGATTCGGTACAAAAAGATCAATTCGCGAACAATTTGTATGAGGAAAATGAAACCGAAGCCGGATTCGGTGGCGAGTTGCTTCACAATGAACAAATCAAGAACCGGTTTGAGAATGACGCACGAAACGTGCTTCTTGAAAACCAAATAGAACCTGGGGCGAGTAACGAAGCACCAGAAAGAAGCGACTTGCTTCAAATCGAAAGTTCTAATTTAGAAATCGCTTATTTGCAAAGTGATGAGGTTATTGAGTACGGATCAGAGCGGGCTATGTTTGTGAAGCGGGATGAAGCGGTTGTTAAAGATGAACCACAATATTTGACACTGACTAGTGCGCGGCATTCCCCTGCACAGCTAACCCAACCCCGGCGGCAAAGCGATGCGCGCGCTTTGGATATGGATGGGATGAATTTAATGGTGAACAGCGAGTGCTTCGCTTTAAATGAGTACGCTATTGGTGGGGAGGAGAGTGTTTCAGTGGACGGCGCTAATATCCGAGCGGATGAAAACATGCCGGCGCGTGGGGAGCTATCGGGACAAGAAAGCAGCAATGCCAGCGATTTGGTGGTTGCTTTACGAAGCGGTTGCGATTTATTAGCGCGGGAGAGTTGGGATGAAGATGACGAGGAGGATTACGAAGGGTTTCAAAATAACTTCAACGAGGATCCGGGGTTGAATTACGGCTGCTTCAATCGCTTCAAGCAGGATTCGGAAAACTTGGGCACGAGTTTTGTTTCGGAGGCCGGGGAAGCGGTgtttaaaatggaaaaaatgatGAGTTTCACTTCGAGTTCTTTACACGAACCGGCTGCATCTTCTTCTTCGAATAACAAGCACCTTATTGGAGGAACTTCTAATTTCACCGCGAATACTTCGTTCTCTTCCGAACCTGTTGAGATTTTCAACGCGAACGACAAGCGATTTATTCCGGAAAAAACATCGAATTTCGCTTCGACCAGTAGCCAACAAGTAGAAATCTTCACTGCGTCTTCAATAACCAAGCGAGTCAGAATATTCGAAGCGGATAAAGTTTCATTACAAGACAATCAGCCTGTTGAAATATTCACGGATCCTTCAATAAACAAGCGGGTGGAGATTTTCAAAGCGGAAAATTTCACTTCTGCCGCTTCGTCCTCTTTAAACGATCAACGGGTTGAGATATTCGACACTGCTTCTGCCAAGCAAATTGAAGGATACAAAGAGGAAAAAGCTTTAACCATAAACAATCAATCGGCTGAAGTATTCAACACTCCCACCGAACCGGTTAACGTTTTCAAAACGGAGAAAACTTCGACGTTTGCTTCGACCACTTCGTCTTCGGTGAGGAACAAAACTATTTCCGTGGTGAATAAAGTCGAGGAGGGTGGATTTTTCGGTGGGAACAAGATCGTTTGCACGATGTGCAGTTGCTTGGTGGACAGCGTCGCTTCGCTGAAGCAGCACTCGGAGGAGGTGCACGGGCTCAAGGGCGATGAAAAGTACAAATGCGCTGTGTGCGGCGAGGCGTTTCAGACGGAGCCCAAGTTCACGCAGCATCTGCAAGTGCACCCCCTGGAGTGTCGACTTTGTGGGAAGTATTTCTATAGGCGTCAGAACATGCAGTTGCACCTCAAGCGCCACATGAACATCCGCCCTTACAAATGCACCGCGTGCGACAAATCCTTCTTGACGAAACAAAAGCTCGACGAGCACCGCAACGTGCACACCGGCGCCACACCAATCAAGTGCACGCTCTGCGACGAAACGTTCCGGCGTCACTCGAACCTCGTCCAGCACCGCAACCGGCACCATCTGGACGTCAAGCGCAAAGTGAAGGACTTCGTGTGCGCGTGCGGGGAGGTTTTCCATTCGAAAAAGAAGCTCGCGTGGCACCGTGAGACGCACGAGGAGAAGCCGAAGGCGTGCGGGATGTGCTCGGAGAAGTTCGTCCACGCGGCCAGCCTCACCAGGCACATGCGCAAAGCGCATAATGAGAAATTTGTGCCGGACGCTGGGAGGGATAAGGAGAATGTCGAGTGTCCGATTTGTAAGAATGTTTATCTCAGGTCATCATTGGACGTGCACATGAAAACCCACACGGGCGCCCGACCGTTCGCCTGCAGCATTTGCAACAAGGAGTTCACCACCAAGTGGAACTTGAAACTTCACAAGTGGACGCACGCGGCGCGCGTCACCAAACCCTACAAGTGCGACAAGTGCAAAGGGGCGTTCGTGCGCGCCTCCGACTACGCGGCTCACATGAACGCACATCGGTCCGTGAGGCCGTACACGTGCAACCATTGCGGCGCCCAGTTCATCCGGAAGTACAACTGTCTGCGGCACGTGCGCGAACACGAACGAACCAAAACGCACGCGTGTCAAGTTTGCGGTAAAGAGTTCCATCGGTCGTATTATCTTAAAGATCACATGCGGGTGCACAGCGGCGCGCGGCCCTACGCCTGTCACATCTGCGGGAAAACGTCAGCAACGAAGAGTAATCATAATAAGCATGTGCGGATACACCACGCTAGGGATCCCGTTAGCACTGAGAATTAA
Protein Sequence
MESTGSTLCPVCTLYLRPGITLQSHLETHPKDKVIEALVRQQYVLPAVFNAQQVLCQPYVYHHQQQQQQQVIVAATTSTSSQQQQQQAQIIPVIMSSSTVSSFLAAASPSIAAAIQQNGEILDGSGPDNSQMNQTGMIPSNSTMLAHSNSQLMNPNPASQMLNPANSTMVSPSNSQMVSPSNSHLVNPLNSHLVNSPNTQLVNPPNAQLLNPPNSALLSPLNMLSPNGQMIVPSNSAMMSSNSGLLNQPTLVYSNSAMLDPSNSMFGSSNSSNGAFDNGNPPNSPTNLMSSNSASQTVTSNASMLGSSSNALLNQNSSNSTILRQPPSNPAIISSNSAMLCQPNMISSNAPMMDPTNSLMLVPSNHNANTPSSSISQNTYTNSSPSNSTMVTSNSLLVAHGNPPNPTMINSSTNPLIVAPLNSANQTMDNSTMSNPLPQPQIFQPPYNTFITSTPNGAVFIYRSNVEESYVEETEELNKSCQTSGNDNGEETSPAKSRREDAGTKKGGEKMKGEEEAESEETEIFEWCEDEEAEKEDTARRSEDEEEKGFAQQSEENRYKGEERIREDECLKEPDDFSSGNFNCMENPEEGDENGEQSQDGEIVDSKVEYEETKILCEQLVTIEQEQVIATTKREERRNRKNTPRNAKNNMDEEIDLTQSPRQHGDDENTRIGFDVIVLSGEEGDEAESLVSTRIQSLRKKQNEEKHKKVSVRRKSQQSLKDVGIVVLAANKNQQQQSGNQSNRQLTPPAEDHVYTPRSRRRPSGDQEPMKMSRKKYRRRRRLQDEETDDDTEDEEEDYVAAEQSTTTRVLRNGKCVISKSWISWRRNPDIENQLSIQIEEIEDPPLKSGGNEEADQGSSSSGSYRLLQTEEIEDQAISSTRDLQQQLMENEAINVQDVLIFSNGNEGVDKDKQERNALDQNEAIDGNGFIDIIEKSDESETEAQDEINTTKINDSVQKDQFANNLYEENETEAGFGGELLHNEQIKNRFENDARNVLLENQIEPGASNEAPERSDLLQIESSNLEIAYLQSDEVIEYGSERAMFVKRDEAVVKDEPQYLTLTSARHSPAQLTQPRRQSDARALDMDGMNLMVNSECFALNEYAIGGEESVSVDGANIRADENMPARGELSGQESSNASDLVVALRSGCDLLARESWDEDDEEDYEGFQNNFNEDPGLNYGCFNRFKQDSENLGTSFVSEAGEAVFKMEKMMSFTSSSLHEPAASSSSNNKHLIGGTSNFTANTSFSSEPVEIFNANDKRFIPEKTSNFASTSSQQVEIFTASSITKRVRIFEADKVSLQDNQPVEIFTDPSINKRVEIFKAENFTSAASSSLNDQRVEIFDTASAKQIEGYKEEKALTINNQSAEVFNTPTEPVNVFKTEKTSTFASTTSSSVRNKTISVVNKVEEGGFFGGNKIVCTMCSCLVDSVASLKQHSEEVHGLKGDEKYKCAVCGEAFQTEPKFTQHLQVHPLECRLCGKYFYRRQNMQLHLKRHMNIRPYKCTACDKSFLTKQKLDEHRNVHTGATPIKCTLCDETFRRHSNLVQHRNRHHLDVKRKVKDFVCACGEVFHSKKKLAWHRETHEEKPKACGMCSEKFVHAASLTRHMRKAHNEKFVPDAGRDKENVECPICKNVYLRSSLDVHMKTHTGARPFACSICNKEFTTKWNLKLHKWTHAARVTKPYKCDKCKGAFVRASDYAAHMNAHRSVRPYTCNHCGAQFIRKYNCLRHVREHERTKTHACQVCGKEFHRSYYLKDHMRVHSGARPYACHICGKTSATKSNHNKHVRIHHARDPVSTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-