Pspi019051.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Philonthus spinipes
Gene Symbol
-
Assembly
GCA_963082785.1
Location
OY720307.1:22145927-22183041[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 7 1.4e-05 0.0022 19.6 1.4 1 23 813 835 813 835 0.98
2 7 3.5e-07 5.5e-05 24.7 0.2 2 23 844 865 843 865 0.97
3 7 3.7e-05 0.0059 18.3 1.7 1 23 871 893 871 893 0.98
4 7 1.1e-07 1.8e-05 26.2 2.6 1 23 899 921 899 921 0.98
5 7 1.7e-06 0.00027 22.5 0.4 1 23 927 949 927 949 0.98
6 7 1.7e-05 0.0027 19.4 7.7 1 23 955 977 955 977 0.97
7 7 1.8e-05 0.0029 19.3 1.8 1 21 983 1003 983 1004 0.95

Sequence Information

Coding Sequence
ATGGAGGAAATAATACGCAAAGGCGACCTCCGAGTTTTGGCCACTGAGAGTTGCTGCGACGTCGTGATTAGCTGCATCGGATTCAAATTAATGGCGCACAGGATTATCCTATCCATTGCCAGTCCTGTTttacaagatTTACTTCACGAAGACAATTCTCTGCCCACAGTCCTAATCTTCCCGGACATAACAGCCGCAACGATGACTTTAATCCTCGACTACATCTACTCGGGCCACGTCACATTACAGCACTCCCAATTACCCGATTTCTTCACGGCCGGCAATTTGCTCAAGCTAAAAATCGAAGAAGACTGCCTGAAAACGCTCAAAGACGACTATCTACAGAAAGAAGACTATTTGAAGATGTCCAAGAGCAATTCGGAAACAGCATCGAAATGCGAAACGCTGTCGAAAGGGTCGGATTTTTATTCTGGGATCTTGAAAGGTGGTGATTTTTATGAGTGCAAGctagaaaagaagaagagggcTGTGCCGGGTTTGATACCGATTGGGAAGGTGAGGAAGGTGCCGAGGGGTAAACGGGGGTTGTTGAATAAGGTCATTCCGAGCCCGTGGACGCCCAGGGAGGAGAGGATTCTTGATGATCCTCGCGTTGATTGTGGATTGAGTGTTGATTGCACGGTGAAGCAATGCGCCATCGACGTCACGTCCAAGCCCAACGACTCGAATAATAACATCGAACCGGAAACGAATGAATTACTGCTGGGACAAAAACCAACGAAGGACGACCAGTTGATAAAAGATTTCACCGGACAACAAATTTCGAATTTAAGATTAAGTGAAGCATTAAGCGAAATCGGGTTATTGAAAAAGAATGAGTCAATTAAAGAAATGGATACTGAAGGTTTGTTGATGATGAAAAACGTGGCGAGTGGCGAGAAAAAGGTTCCGGTTAAGAAGGGACGACAAGCGAGGAGTATTCAAGATTTGTTAATGCGGAAAATTGCGATGAATGAAACGAGGAAACGAGAGAAACATATTTTAGATGAAAGTGTGAAAGAAAAAGggggaattaatttatatgaaaggGGGAAACAAGAGTCCCCAGGAAGTGAAATTACGATACAAGAAATAATATCTTCAGATGAAAGAACAATACGAGAAAGAATGTCTTTGGGTGAAAGAATAATTCGAGCAAAGATGTCTTTAGATGAAAGAACGATGCAAGAAAAAATAGCTTTAGATGAAAAGACAGCACAAAAAAGATTGTCCTCAGGTGAAATGACAACACAAGAAATAATGTCTTCAGAAAGAATGTCATTAGGTGAAAGGACAATACGAGAAATGATGTCTTTAGATGAAAGGACGATGCAAGAAAAAATGGCTTCAGACGAAAGGACACCACAAAAAAGAATGTCCTCAGATGAAATGACAAtgcaagaaaaaatgtttttggatGGAAGGATAATACGAGAAAGAATGTCTTTACATGAAAAAACGATTCAAGAAAAACGGCCTTTATGTAAAAGGACGTTGCAAGAAAGAGTGTCTTTAGATGAAGTGACTACACAAAAAAGAATGTCTTTaggtgaaaaaataatacaagaaaaaagtGAAGTGGTAGCACAAAAAGGAACTCTTTTAGATGAAAAGAAAATGCAAGAAAGACTGCCTTTGAATGAAAGGACAATGCAGAAAAGAATATCTGTAGATGAAAGGACAGCACAAGAAAGAATGATTTCGGGTGACGGGAGATCACAAGATGAAAGGACAATACAAAAAGTAATGATTGCTGGTGAAAGGACATTACAGGATAGAGATGGAATAATAAATCGAAAGAAAGCAACTCTAGATGAAATGACAAAAcaggagaaaatatttttaagtgagAAAACAACAggagtggaaataattttggaTGAAACGATAAAACAAggatttttaacaaaacagaCAATACAAGAAGAAGcgttgaatttagaaatattaaagcCTATTAGTGTggaaaaatataacgaaaacgtaagtttaataaaaacagtgtCAACTAGTGAGACTTTAAATGACCGAGAATTAacgaagaaattattaataaaccaagAGTTATTAGAGAAAAAACGTGCCAATCCAAGACttctgttaaaaaaagtgtCGAATAAATTACAAACTAAACAAGCAACAATCAGTGAAACGTTAAGTGCGGTAATTGCTGGATCGGGTAAGGGAGGGGTTTTGCTGAAGACCGGTGATCGGGAAGAGCCAGTTAACGAATCGTTAGCTCCGTCGGGGCAAAAAGTGTCGATAAGTGGCCAAAAAGAATCGCAAACGGGTGTTCAACAGTTGCGGAGCGGTGGCGCGGGAAATGTCGGCgccattaaaaaacaatttgatgtGAATCGATGTGAGATGATTGCCGCCGATGATGATGAAATAGTGCCGTCGGTGAAAAAGGCGGAGGAGTGCAAAGAGAAGAAGTACAAGTGCGGGGAATGCGGAAAGGGGTTCAGCCAGTTGAGGAATTATAAATATCATCgTTCCATCCACGACGGCACGAAAAAATTCTCGACGACCTGTCCCGAATGTGGAAAGGTCTTTAATGATCGCGGCTACCTGAGCAGCCACATGAAGATCCATAGGGACCGGAAGGAGTACGCCTGCCAGCACTGCCCGAAGCGGTTCAACCAGCGGGTGGCTTACAACATGCACCTACGCATTCACACCGgaGTTAAACCGCACGTCTGCAGCGATTGCGGGAAGAGCTTCTCGCGGAAGATGCTCCTGAAGCAGCACCAGCGCGTCCACACCGGAGAGCGCCCTTACACCTGCCAGGAATGCGGAAAGAGCTTCGCCGATCGCTCCAACATGAGTCTGCATGCACGGTTACACACAGGTGTGAAGCCATATTCATGCACGATGTGTCCGAAGAGCTTCACGAAGAAGCATCACCTGAAAACCCACATGAATTTCCACATGGGGATCAAGCCGTACAGCTGTCAAAAGTGCGGGCTCTCGTTCTCGCAGAGCAGTAACATGCGGACGCATTACAAAAAGTGCATTTtgaaaaacagtgaaacaaacacgTAA
Protein Sequence
MEEIIRKGDLRVLATESCCDVVISCIGFKLMAHRIILSIASPVLQDLLHEDNSLPTVLIFPDITAATMTLILDYIYSGHVTLQHSQLPDFFTAGNLLKLKIEEDCLKTLKDDYLQKEDYLKMSKSNSETASKCETLSKGSDFYSGILKGGDFYECKLEKKKRAVPGLIPIGKVRKVPRGKRGLLNKVIPSPWTPREERILDDPRVDCGLSVDCTVKQCAIDVTSKPNDSNNNIEPETNELLLGQKPTKDDQLIKDFTGQQISNLRLSEALSEIGLLKKNESIKEMDTEGLLMMKNVASGEKKVPVKKGRQARSIQDLLMRKIAMNETRKREKHILDESVKEKGGINLYERGKQESPGSEITIQEIISSDERTIRERMSLGERIIRAKMSLDERTMQEKIALDEKTAQKRLSSGEMTTQEIMSSERMSLGERTIREMMSLDERTMQEKMASDERTPQKRMSSDEMTMQEKMFLDGRIIRERMSLHEKTIQEKRPLCKRTLQERVSLDEVTTQKRMSLGEKIIQEKSEVVAQKGTLLDEKKMQERLPLNERTMQKRISVDERTAQERMISGDGRSQDERTIQKVMIAGERTLQDRDGIINRKKATLDEMTKQEKIFLSEKTTGVEIILDETIKQGFLTKQTIQEEALNLEILKPISVEKYNENVSLIKTVSTSETLNDRELTKKLLINQELLEKKRANPRLLLKKVSNKLQTKQATISETLSAVIAGSGKGGVLLKTGDREEPVNESLAPSGQKVSISGQKESQTGVQQLRSGGAGNVGAIKKQFDVNRCEMIAADDDEIVPSVKKAEECKEKKYKCGECGKGFSQLRNYKYHRSIHDGTKKFSTTCPECGKVFNDRGYLSSHMKIHRDRKEYACQHCPKRFNQRVAYNMHLRIHTGVKPHVCSDCGKSFSRKMLLKQHQRVHTGERPYTCQECGKSFADRSNMSLHARLHTGVKPYSCTMCPKSFTKKHHLKTHMNFHMGIKPYSCQKCGLSFSQSSNMRTHYKKCILKNSETNT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01186362;
90% Identity
iTF_01186362;
80% Identity
iTF_01186362;