Basic Information

Insect: Philonthus spinipes
Gene Symbol: -
Assembly: GCA_963082785.1
Location: OY720317.1:16873081-16877286[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 4 6.3e+02 2.5 1.8 3 21 110 128 109 129 0.77

2 12 0.0013 0.2 13.5 6.5 3 23 141 161 139 161 0.96

3 12 3.1e-06 0.00049 21.7 1.3 1 23 167 189 167 189 0.98

4 12 2.3e-07 3.6e-05 25.3 2.7 1 23 195 217 195 217 0.99

5 12 1.2e-06 0.00018 23.0 3.5 1 23 223 245 223 245 0.98

6 12 0.00029 0.046 15.5 3.4 3 23 258 277 256 277 0.97

7 12 0.0002 0.031 16.0 2.5 1 23 284 307 284 307 0.98

8 12 2.1e-05 0.0033 19.1 5.5 1 23 313 335 313 335 0.98

9 12 0.0096 1.5 10.7 1.1 1 23 341 363 341 363 0.98

10 12 3.4e-06 0.00053 21.6 1.5 1 23 369 391 369 391 0.99

11 12 0.00041 0.065 15.0 4.1 1 23 397 419 397 419 0.99

12 12 0.00047 0.074 14.8 1.9 3 23 427 448 425 448 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	4	6.3e+02	2.5	1.8	3	21	110	128	109	129	0.77
2	12	0.0013	0.2	13.5	6.5	3	23	141	161	139	161	0.96
3	12	3.1e-06	0.00049	21.7	1.3	1	23	167	189	167	189	0.98
4	12	2.3e-07	3.6e-05	25.3	2.7	1	23	195	217	195	217	0.99
5	12	1.2e-06	0.00018	23.0	3.5	1	23	223	245	223	245	0.98
6	12	0.00029	0.046	15.5	3.4	3	23	258	277	256	277	0.97
7	12	0.0002	0.031	16.0	2.5	1	23	284	307	284	307	0.98
8	12	2.1e-05	0.0033	19.1	5.5	1	23	313	335	313	335	0.98
9	12	0.0096	1.5	10.7	1.1	1	23	341	363	341	363	0.98
10	12	3.4e-06	0.00053	21.6	1.5	1	23	369	391	369	391	0.99
11	12	0.00041	0.065	15.0	4.1	1	23	397	419	397	419	0.99
12	12	0.00047	0.074	14.8	1.9	3	23	427	448	425	448	0.96

Sequence Information

Coding Sequence: ATGTCCTTTGGAAAGGACCTCAGTAGCATTCCTGTTGAAGGAGAGAATAAGACTGCGGAAAGGGGCGCCTCGCCCCCATTGATTGACTGCGTGGAAAAGAAAGTGAatgaaaattatgataatttaatacGGGAAGAGCAACCGAAGGTTAACGTTAAAACAGAAATATCTTCGGGTAGTGAAGAAGatgaCGATTTTGAAGATCCTTTTCCGATGATCCAAGTGGATGTAAAAATTGAGGAGGAAGAAGATGATGATGAAGGAAATAATGCATGCAGTGAAAGCGACTTAGATGAAAGTGATGATGAAGACGATATCCTAAATTATTGTAAAGTATGTAAGACCACATTCGATTGTGATGAGGATTATAGGGAACACTATAGACAAATTGCTGTAAGCATCAATTCGAAGGGATTAGCATGCTGCTCGTGTCGAAAATGTTTTCGAGATTTAACTCAATTGAAAGTTCACCAGCGAAAACATACTGGAGAAAAGCCTTACTCTTGTGACATCTGCAAGAAGAGGTTTTCAATCAATggcaatttaacaaaacacaaaatcACCCACACTGGAGAAAGGCGGTTCGAGTGTGATACTTGTGATAAGAAGTTCTCGCAATTTGCGCATTTGGAAGACCACATGAGAACACATTCaggtgATAAACCATTTGAATGTGATCATTGTGATACAGCGTTCAAAACAAAAGCTCGTTTACGCAAACACATGAAATCTCATGATCCAACTGGAAATGCCAAACGCAGGAATATGCACTGTGAAATATGCAACAAACGCTTCACCTTCTTCCAACTTGAGGCACACATGCGGCGTCACAAGGACATCGATCGCAGCTTCAAATGCCCCCAGTGTGACATCCAATTAAAAACCTACAACTGCCTACAGAGCCATATGAAAACAGCCCACTCTGATCTCAAAAATTACATCTGCCACATTTGTCAGAAGAAATTTTCGACTGGCACACATCTCTCACGGCATGTTAAAACCCATTCCGGGATAAAACCCTATATATGTGAAATTTGCATGCGGGGATTTCCCTGTTCGCAGAACCTGAAGCGGCATTTACAGGTGCACAGGGGAGAAAAGCCTTTTCGGTGTGAAACATGCCAGAAAGCTTTTCTTACTTTAGAAAATTTGAAACGGCACATCCGAACGCACACTAAAGAAAAACCGTACTCGTGTACCGTGTGCCATAAACTATTTGCTCATAGCACGACTGTGAAGGAGCACATGTTAACTCATACAGGAGAGCGCCCTTTCGGTTGTAGGATTTGCAACAAACAATTCTCTTTGAATAAAATGCTTTACCGGCATATAAGACAAAAACATCCTCAGCAATTAGAAGAATGTGatattaaagatattgtagtgAAAGCCGGGGATGTTGGTAAGTTAATTCGTGATATTAAGGAGGGTGATGAAGTTGAGCCAAATTTCATTGCTGTTAAATGTGAGATTAAGGAGGAACCCAATgaagtttttattgttaattaa
Protein Sequence: MSFGKDLSSIPVEGENKTAERGASPPLIDCVEKKVNENYDNLIREEQPKVNVKTEISSGSEEDDDFEDPFPMIQVDVKIEEEEDDDEGNNACSESDLDESDDEDDILNYCKVCKTTFDCDEDYREHYRQIAVSINSKGLACCSCRKCFRDLTQLKVHQRKHTGEKPYSCDICKKRFSINGNLTKHKITHTGERRFECDTCDKKFSQFAHLEDHMRTHSGDKPFECDHCDTAFKTKARLRKHMKSHDPTGNAKRRNMHCEICNKRFTFFQLEAHMRRHKDIDRSFKCPQCDIQLKTYNCLQSHMKTAHSDLKNYICHICQKKFSTGTHLSRHVKTHSGIKPYICEICMRGFPCSQNLKRHLQVHRGEKPFRCETCQKAFLTLENLKRHIRTHTKEKPYSCTVCHKLFAHSTTVKEHMLTHTGERPFGCRICNKQFSLNKMLYRHIRQKHPQQLEECDIKDIVVKAGDVGKLIRDIKEGDEVEPNFIAVKCEIKEEPNEVFIVN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -