Basic Information

Insect: Philonthus spinipes
Gene Symbol: -
Assembly: GCA_963082785.1
Location: OY720299.1:22333650-22362491[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 6 9.4e+02 1.9 1.0 8 22 594 608 591 608 0.89

2 20 0.29 46 6.0 0.3 1 21 616 636 616 637 0.94

3 20 0.15 24 6.9 1.9 1 23 666 689 666 689 0.93

4 20 1.2 1.9e+02 4.1 0.2 5 20 701 716 699 718 0.91

5 20 0.0014 0.22 13.3 6.7 1 23 809 832 809 832 0.98

6 20 0.00045 0.071 14.9 2.0 3 23 845 865 844 865 0.98

7 20 0.00067 0.11 14.4 0.1 2 23 873 895 872 895 0.95

8 20 0.00015 0.023 16.4 0.7 1 23 905 927 905 927 0.98

9 20 0.00014 0.022 16.5 1.9 1 23 929 951 929 951 0.97

10 20 0.0032 0.5 12.2 0.4 3 23 975 995 973 995 0.95

11 20 0.00083 0.13 14.1 1.4 1 23 1016 1039 1016 1039 0.97

12 20 3.6 5.7e+02 2.6 0.1 3 23 1054 1074 1053 1074 0.88

13 20 2.9e-05 0.0046 18.6 5.3 1 23 1096 1118 1096 1118 0.98

14 20 4.7e-05 0.0074 18.0 0.4 2 23 1200 1222 1199 1222 0.95

15 20 2.6e-05 0.0042 18.8 0.1 1 23 1243 1265 1243 1265 0.95

16 20 0.0097 1.5 10.7 0.4 1 23 1290 1313 1290 1313 0.94

17 20 9 1.4e+03 1.4 5.9 2 23 1325 1347 1325 1347 0.94

18 20 9.3e-06 0.0015 20.2 1.3 2 23 1359 1381 1358 1381 0.96

19 20 3.4e-05 0.0054 18.4 0.8 1 23 1390 1412 1390 1412 0.99

20 20 0.00096 0.15 13.9 0.6 1 23 1440 1463 1440 1463 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	6	9.4e+02	1.9	1.0	8	22	594	608	591	608	0.89
2	20	0.29	46	6.0	0.3	1	21	616	636	616	637	0.94
3	20	0.15	24	6.9	1.9	1	23	666	689	666	689	0.93
4	20	1.2	1.9e+02	4.1	0.2	5	20	701	716	699	718	0.91
5	20	0.0014	0.22	13.3	6.7	1	23	809	832	809	832	0.98
6	20	0.00045	0.071	14.9	2.0	3	23	845	865	844	865	0.98
7	20	0.00067	0.11	14.4	0.1	2	23	873	895	872	895	0.95
8	20	0.00015	0.023	16.4	0.7	1	23	905	927	905	927	0.98
9	20	0.00014	0.022	16.5	1.9	1	23	929	951	929	951	0.97
10	20	0.0032	0.5	12.2	0.4	3	23	975	995	973	995	0.95
11	20	0.00083	0.13	14.1	1.4	1	23	1016	1039	1016	1039	0.97
12	20	3.6	5.7e+02	2.6	0.1	3	23	1054	1074	1053	1074	0.88
13	20	2.9e-05	0.0046	18.6	5.3	1	23	1096	1118	1096	1118	0.98
14	20	4.7e-05	0.0074	18.0	0.4	2	23	1200	1222	1199	1222	0.95
15	20	2.6e-05	0.0042	18.8	0.1	1	23	1243	1265	1243	1265	0.95
16	20	0.0097	1.5	10.7	0.4	1	23	1290	1313	1290	1313	0.94
17	20	9	1.4e+03	1.4	5.9	2	23	1325	1347	1325	1347	0.94
18	20	9.3e-06	0.0015	20.2	1.3	2	23	1359	1381	1358	1381	0.96
19	20	3.4e-05	0.0054	18.4	0.8	1	23	1390	1412	1390	1412	0.99
20	20	0.00096	0.15	13.9	0.6	1	23	1440	1463	1440	1463	0.98

Sequence Information

Coding Sequence: ATGTACTACGAGTGCGGTTTTATCGGGCGCCGATCATTATTTCTCGGGCGATCTCCCCGCTGGCATCCCCCCGGGGCCGATTTCGCCAATTTCCACCAGGATCGGCCGCGAGATAAACCTGTTAACAGCCGGACGGAACGCAACGCAAATCATTTCTGCTGCATCACGCGGAGGAAGTACCATCCACGCGAAGCCCGACGGCTTCCATTCCATTCCCAAAAGGCCGGCCCGATAAAAGATAAAATTCCGGTAACATTAAATTTCCATTCTCCCATCGAAAGTTTGGATACTTCGCAAGGAGGATTTTTGGAGCAGAGAACAAGCATGAGCAGCGAGCGTCCCAACTGGTGGTGGGGAAAACCCAAACCAACGGCGCGAACGGAACGGCCGCCGAATAAACGCGTCCGTCCCTCGCGGATACATTCTGTGAAGCCAGAAGCGGAAAAACAGGAGTGCGTGCGGATTTTCCTGGATATCCTCGTCGCGGATGTTGTGCGGAAAATGTTCGCCAATTACACATCGTGCTGCCGCCTGTGCCTGGCCGACGACAAAGTCGCCTCGTTGAACAGCATCTACGCTGGCTACCCAGACGCCGACACCCTCGTCCAAATAATCAACGCCTTGATCGGCGTGCAGgtaaCAGCGCAGGACAAATTAACGACGATGCTTTGTGATAAGTGTTATAATAATGTGAACAGTTGGGACGGGTTCAAGAAGAAGTGCCTGGAAAACCAGGAGAAGTTGCAGGAATGGATGAACAACGCCACAGAAGCACCAGTTGTACTAATAAAAGAAGAACCTATCGATGTGGATGATCACGACGATTCGGCCATGCCGATTGAAGAAACACAAGAAGagGCGCCAGTTGTGAAATCGGAACCTGCCGATGTAGCCGATCCCCTGGAAGATTATCCCGAATTGCCGCCGGCTTTATCTCCGTGTCCGCCCGCCTTAACCCGAGAAGACTTGGAGGAGAACACAAACGGAGAAGGTGCACCAAAGGTTGCTTCAAATTTAAGCACAGACCCTCCTAAGATTACCCCGAAAGAATTTACAGACACATCCATTCCAAAcggatttataaaaatatctaagACTGCCCGAAGCAGCATTTCGAATGTCGCTCGCAAAGAACGCCAGAATCCGTTAAAAATACTCTCAAATGATCTTTTAAGCATATCACGAACATCCGACGGTCCGAAAATGCCTCTGAGCGAAACGCTGAGAAAAGCCCTGAGGAAATACGCTGGAATGCCGGAGCTTTCCCCGGAGGCCACGCAAACCGTACCCAAAACGGCCGTGGTAATGCCCAGAATTTCCAAAGTCACCTCTGAGGTGAAGATGCCTGAGATTgtagattttgaaattaaaaaaattgagaaagaTCATCCGGTGTGCGGTTCGGTCTCGAGTAGCATCCAAAACAGGAAGGTCCGCGAGAAGTCGACTAGGGGGATTTGCGCAGGCCAAGGTGGTGGTATTAAACGTAAATTTGTGCAAACGGAAGaaattgttcTACCCGAATCGGAAAACAGCCAGGAGAGCCAAAAAACACGATCCAGCGTCGTATCGTCCAATATATCCGAAATCGAACAGGAGAAGATTACTTTCGCGGCCGGCCTGAGGTTGCAATCGAAATCAGCGACACCCACCCCCACACCGACTTCGGCGCAGAACAACCAGAAACCCACTGATTTGAGCAAAATCGAATGGGACTACGTGGAGAGGAACCGAGTAATGGTGACCATGTTCAAACGCATGAAATGCTGCTGCCACAACCAGCATTTCAACACATGGAAAAAACTGATAACGCACTTGCGATCCCTGTACGTGTGGTTTACACCGTTTACTTGCTACAATTGTCTGGTGGTGTTTTCTGGAAGGTCAGGCATGATGAAGCACTATTTGAGGTGCGCAAAGTCGCAGTACGAGCAGCTGCTGAGGCTGACGGAAACGAAAACGAGGACACCGGATAAGATCCGCCTGTACCAGAACTACAAATGCCTGCAGTGCAACATAATGTTTTACTTCTTCGAAGATTTATGCGAGCATGTCGATAACGAGCACGTCGAGGACGTAGCGGAGGGGGTTCACACCTGTCTCTGCGAGAAGGCCTTCGagaataaattagattttgcTAAGCATATTTACAAATCGTGTTACGTTAACAGCTATTGCGATATTTGCTGTAAGACTTATTCGGATGTGGACGAGTTTAGGAGTCACTGCGAGGAGACTCACGATAACGACGCGAATTTCGAGTTTCTGCCCTTGCACCCGAATTTCGCCGTGTTCAATCAGATGCAGCTCAATCAGTTGATCGGGAATAAGTTGAAGCCACCGGCTCTTCGGGCTTCCACGAAGGAGGACTCTAAAGGGGACGACGATATTAAGGTTATTAATCCGCTGGCGTTAACGACTAATTTCGTGTGCAAGGTTTGCAAACAAGAGTGCTCGAGTTATCACAATTTGCAAAAGCACTTGAAGACGTTCCATAAGGAGGAACTTAACGAAGCCGTCGATCGTGGCATTTGCGATATTTGCGGATCGAAATTCAGTAGCTATCATAATATGCTGCGACATCGGAGGGTTCATGATGACGATATGAAGCAGCTGCAATGCCCGGAATGTCCGGAGAAATTCAGATTGAATATGGAGCTTAAGGATCATTTGAGCTCGATACACTCGTCGGGGAGGCCGGTAAGGATGATCCACCGGTGCTCGGAGTGCGGGGAGGCTTTCAAGAACATCCCGATGCTCGAGGAGCACAAGAAAACCCACCTCCACAAATGCGAGGAGTGCGGGAAGGCCTTCAACACAATCAAAGAATACGAGCAGCATCGCAGCTCCCACTTAACGCTCACCCTCAAACGTGATCCTCACACCCTCAATTACAGCAGCCTCAGCCCGGGGAATAAAATGTGCCAGCTCTGCGAGCGGCAGTTCGAAACAGAAGAGGAACTCCAAGAGCACATGACTCTGCATGAAACGATGCCGACTTTAGAGGCGGAGAACGAGAGCATGCTGCTGGATAAACCGCGGAATTACAACTGCGAGGAATGCTTCAAGTTTTATAACAACCCGAAGAGTTTGTGGGCGCATAATAGGCGGTTTCACCCGGGCCGCTCCACTGTCTCGAGCAACGAATTCCCGAAAGCTTGTAATGAATGCGGCCGGGTGATCGGGGCGCATCCGGCCTGGATAATGCACCAGCAGATGCACAAGCGGAACTCCCTGAAGGCCCAGAAAATCAATTCAGATAACAGTGCGGAGGATTCCGACTATCACACGTGCAAGCGCTGCTTTAAAGTCTTCGGGAGCCGCTCGAATCTCAAAAATCACATGAAATCGCATGGGATTAACGTGAGCCCCAGTAGGGCTTTGACGAAGACGAAGCAGCAGAAGACTTACTGGTGCGATTCGTGTCATACCGCTTGTCATGGATTGGCCGAGTTGAATAAGCATAAATCGGAGTGTAATGTGAGCGAGGTTGATTCCGAGTCGAAATTCGATACGGGAGATGAGGGTGGCAAGAAGCCTAGGAAGAATTTCGAGCAGCCGGTCGATCCTCAAGAGGAATTGAACAGAAAGCCGGTttactgtaaatattgtaaaatccCGTTCACTTCGCTTTCCACTTTGAATCAGCACATGGCGAAAGAGCACGATGAAAGAGCTAAACCCAGCgtgatgaaacaaataaaaccacCAGCGAGTTCGAACCGGTATTCGTGCACCGTTTGCAAAAAGAGCTTCGCGACGGCCGGGGCTTTAAACACCCACCAAGGCTGGCACAAGCGTTCCAAAACAAGCAAACTTCAAATCAAACAAGAATACAACGTTAATAACGGCGAAGCCGCTGCGGAGCACCGGTGCAAAACTTGCGGGCTCGTTTTCGACGAAGACACCACGTTACAACTACACATTTTAGAAATCCATCGTAATATCAACACATCCGTTTTAACCGCCCCCAAATGCAAATACTGCTCCCTCGAATTCAAATCCCGCGCTGACTGCGACCACCACGAAAAGACCTTCCACGCCCCCTCGATTCCTGACAACAAAATCGGCGTCTCCTGCAAGTACTGCTACAAGGTCTTCAGCCGGAGCGACTACCTCAACCTGCACATCAACAAGAAGCACCCGCAGTACGCCACGGCCGGGCCGTACAAGTGCACGCAGTGCAACCGCGTCTTCGACAAGCAGAACGCCCTGTCGATCCACTTGAAGGTCCACGAGAGGCTCAACACCACCGCGGGCCCTGTGAAGAACGGGCCCGCTTCCGCCGGCCAGCAGAACCCCAACCGGGTCTACAAGTACTCCTGCTCGATCTGCCACACCGGCTACGATTTGCCGAAGGACTTGAGGAATCACATCATCACTTCGCACCCTTTTTAA
Protein Sequence: MYYECGFIGRRSLFLGRSPRWHPPGADFANFHQDRPRDKPVNSRTERNANHFCCITRRKYHPREARRLPFHSQKAGPIKDKIPVTLNFHSPIESLDTSQGGFLEQRTSMSSERPNWWWGKPKPTARTERPPNKRVRPSRIHSVKPEAEKQECVRIFLDILVADVVRKMFANYTSCCRLCLADDKVASLNSIYAGYPDADTLVQIINALIGVQVTAQDKLTTMLCDKCYNNVNSWDGFKKKCLENQEKLQEWMNNATEAPVVLIKEEPIDVDDHDDSAMPIEETQEEAPVVKSEPADVADPLEDYPELPPALSPCPPALTREDLEENTNGEGAPKVASNLSTDPPKITPKEFTDTSIPNGFIKISKTARSSISNVARKERQNPLKILSNDLLSISRTSDGPKMPLSETLRKALRKYAGMPELSPEATQTVPKTAVVMPRISKVTSEVKMPEIVDFEIKKIEKDHPVCGSVSSSIQNRKVREKSTRGICAGQGGGIKRKFVQTEEIVLPESENSQESQKTRSSVVSSNISEIEQEKITFAAGLRLQSKSATPTPTPTSAQNNQKPTDLSKIEWDYVERNRVMVTMFKRMKCCCHNQHFNTWKKLITHLRSLYVWFTPFTCYNCLVVFSGRSGMMKHYLRCAKSQYEQLLRLTETKTRTPDKIRLYQNYKCLQCNIMFYFFEDLCEHVDNEHVEDVAEGVHTCLCEKAFENKLDFAKHIYKSCYVNSYCDICCKTYSDVDEFRSHCEETHDNDANFEFLPLHPNFAVFNQMQLNQLIGNKLKPPALRASTKEDSKGDDDIKVINPLALTTNFVCKVCKQECSSYHNLQKHLKTFHKEELNEAVDRGICDICGSKFSSYHNMLRHRRVHDDDMKQLQCPECPEKFRLNMELKDHLSSIHSSGRPVRMIHRCSECGEAFKNIPMLEEHKKTHLHKCEECGKAFNTIKEYEQHRSSHLTLTLKRDPHTLNYSSLSPGNKMCQLCERQFETEEELQEHMTLHETMPTLEAENESMLLDKPRNYNCEECFKFYNNPKSLWAHNRRFHPGRSTVSSNEFPKACNECGRVIGAHPAWIMHQQMHKRNSLKAQKINSDNSAEDSDYHTCKRCFKVFGSRSNLKNHMKSHGINVSPSRALTKTKQQKTYWCDSCHTACHGLAELNKHKSECNVSEVDSESKFDTGDEGGKKPRKNFEQPVDPQEELNRKPVYCKYCKIPFTSLSTLNQHMAKEHDERAKPSVMKQIKPPASSNRYSCTVCKKSFATAGALNTHQGWHKRSKTSKLQIKQEYNVNNGEAAAEHRCKTCGLVFDEDTTLQLHILEIHRNINTSVLTAPKCKYCSLEFKSRADCDHHEKTFHAPSIPDNKIGVSCKYCYKVFSRSDYLNLHINKKHPQYATAGPYKCTQCNRVFDKQNALSIHLKVHERLNTTAGPVKNGPASAGQQNPNRVYKYSCSICHTGYDLPKDLRNHIITSHPF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -