Basic Information

Insect: Philonthus spinipes
Gene Symbol: -
Assembly: GCA_963082785.1
Location: OY720303.1:30355911-30361812[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 4.8 7.5e+02 2.2 8.6 1 23 51 73 51 73 0.89

2 14 0.0001 0.016 16.9 1.6 3 23 78 98 77 98 0.97

3 14 2.6e-06 0.00042 21.9 0.1 1 23 104 126 104 126 0.98

4 14 2.3e-05 0.0036 19.0 1.5 2 23 138 159 137 159 0.96

5 14 1.2e-06 0.00018 23.0 0.7 1 23 165 187 165 187 0.99

6 14 2.6e-07 4e-05 25.1 0.7 1 23 193 215 193 215 0.98

7 14 7.7e-05 0.012 17.3 1.2 1 23 221 243 221 243 0.95

8 14 0.014 2.2 10.2 0.3 1 21 260 280 260 281 0.93

9 14 0.065 10 8.1 6.6 1 23 287 309 287 309 0.98

10 14 0.32 51 5.9 1.1 1 21 469 489 469 490 0.95

11 14 0.019 3 9.8 0.3 2 23 497 519 497 519 0.94

12 14 0.007 1.1 11.1 1.5 3 23 525 545 524 545 0.97

13 14 0.0028 0.44 12.4 4.1 1 23 551 574 551 574 0.96

14 14 1.4e-06 0.00021 22.8 1.9 1 23 579 601 579 601 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	4.8	7.5e+02	2.2	8.6	1	23	51	73	51	73	0.89
2	14	0.0001	0.016	16.9	1.6	3	23	78	98	77	98	0.97
3	14	2.6e-06	0.00042	21.9	0.1	1	23	104	126	104	126	0.98
4	14	2.3e-05	0.0036	19.0	1.5	2	23	138	159	137	159	0.96
5	14	1.2e-06	0.00018	23.0	0.7	1	23	165	187	165	187	0.99
6	14	2.6e-07	4e-05	25.1	0.7	1	23	193	215	193	215	0.98
7	14	7.7e-05	0.012	17.3	1.2	1	23	221	243	221	243	0.95
8	14	0.014	2.2	10.2	0.3	1	21	260	280	260	281	0.93
9	14	0.065	10	8.1	6.6	1	23	287	309	287	309	0.98
10	14	0.32	51	5.9	1.1	1	21	469	489	469	490	0.95
11	14	0.019	3	9.8	0.3	2	23	497	519	497	519	0.94
12	14	0.007	1.1	11.1	1.5	3	23	525	545	524	545	0.97
13	14	0.0028	0.44	12.4	4.1	1	23	551	574	551	574	0.96
14	14	1.4e-06	0.00021	22.8	1.9	1	23	579	601	579	601	0.98

Sequence Information

Coding Sequence: ATGGAAAATGAGAAGATTCTAAATGGTATGGAAAATTCTAATGAAAGAACCGCCCCGAAGGAAtgctcaataaaaataaattatgaagtgAATGAGGTTctggaaaagaagaaaaaacgccCTTACATACGCAAAACCCTGGAGGGCAGGCACGAATGCGAGACCTGCGGGAAGAAATTCTTCACAAAATTATGCCACACGAGACACACCTACATCCACCGAAAAAACATATGCAAAACATGCGGCAAGGAATTCTCCACGAACAGGAAACTCTACTACCACCAGCAACTCCACGTGAACGATAAAACCTTCATCTGCAACGAATGCGGTAAAGTTTTCGCGATTCGATCTTACCTGATATCCCACCTAAAAGTCCACAGGGGAGAACAGCGCAATCGGAAGTTCATTTGCGTTTGTGAACTGTGCGGGAGGAAGCTTTCCTCTAAACAGAGCTTAGCCGACCATATGCGGACTCATACGAAAGAAAAGCCATACAAGTGCAACAATTGCGGCGCTTCTTTCGCGACGCAAACGGGCCTCACGAGGCACAAGAAGATCCACGCGCAGGAGAAGCCGTTCAAGTGCGATGAGTGCGGGAAGGGTTTCACGCAGAAATTGAGTTTGGTCACTCATATGAGGTTGCATACCGGAGAGAAGCCCTTCACTTGCATCGTTTGCGAAAAATCGTTTTCGCAGAAAGCATCGATGCTGAGACATATGAAACAACATgcGTACGAAGAGATAATAATCGAGGAAGAGGGTGAGCTGGAGGCGAGTTACCAGTGCGAGGTGTGCTCGCAAATATTCCCCGACCGCAAAGAGTTCCTCGGCCACCACATGTCACAGTTCGGATCGATGTTCACGTGTTGTCGCTGTGGGGATTCTTTTAAAAACAGCTGTGATTTGTACAACCACTACGATACCCATAAAATAAATGAGGGGGTCGAAGAGGTGGTTCTACAAAATTATAACGAGAACGTCGAGGCCGTTATGAATATCCCCACGGACGAAACGGGGAACGAGCTGGTGTATATTTTAGACGACGATAGCCAGTGCGTGAACGAGGTCGTTATCGAGGATTCCGAGAAGTTTTTACAGCAACCGAAAAACGATGGGTATACTGTTGTTCAGGTAGATCACGGTTATATGATTCCGAGCGTTTTCAAGGGGCAATTGGAAACCAAACGGaggtataaaaagaaaacagaggGTGATATAACTCTTCCTGTgtataatgaaattgaaaacatGCAAACTTCGCCCAGTATATTAACCAAAGTCGAACCCTCGACTAgccataaaaataaagtaatgcaCCCCGCGAAAAAACGACATGAAATGCCTGATTTCAGCGCGACTAATTACGAAATCCTCCCCCCGAACTCCGATGTAAACATAacacattataaatgtttacgCTGTGAACAATTATTCATAAACAAATTCGTCTTCTTCAGACATATAGAAAAAGGCAAATGTTACATAAACTCCTGCGACGTTTGCCCGGTGACTTTTATGAAAAACAGCGATTTTTATGAACACTACACGTCCGAACACACAGAGCGGgcgatttgtaatttttgtttccgGACTTTTATGTACGAAAAAAATGTCAAGGAGCACATGCTGAGGCATTTGGATCAGTTCAGGCATAGATGCGAGGAGTGCAATAAAGGGTTTTACACGGTTCGCGAGTACAGGAATCATTATAAGAACAGGCACATGGGGATTCGGCACAAGTGTGAGGAGTGTGGACGATCGTTCGCAGATGAATATTACTTCAAACGGCACCTCGCAACTCACGGGATTAAGATGAACGCCGTTAGTACTTTATCTCAGTTGAATGAGACTATTTAA
Protein Sequence: MENEKILNGMENSNERTAPKECSIKINYEVNEVLEKKKKRPYIRKTLEGRHECETCGKKFFTKLCHTRHTYIHRKNICKTCGKEFSTNRKLYYHQQLHVNDKTFICNECGKVFAIRSYLISHLKVHRGEQRNRKFICVCELCGRKLSSKQSLADHMRTHTKEKPYKCNNCGASFATQTGLTRHKKIHAQEKPFKCDECGKGFTQKLSLVTHMRLHTGEKPFTCIVCEKSFSQKASMLRHMKQHAYEEIIIEEEGELEASYQCEVCSQIFPDRKEFLGHHMSQFGSMFTCCRCGDSFKNSCDLYNHYDTHKINEGVEEVVLQNYNENVEAVMNIPTDETGNELVYILDDDSQCVNEVVIEDSEKFLQQPKNDGYTVVQVDHGYMIPSVFKGQLETKRRYKKKTEGDITLPVYNEIENMQTSPSILTKVEPSTSHKNKVMHPAKKRHEMPDFSATNYEILPPNSDVNITHYKCLRCEQLFINKFVFFRHIEKGKCYINSCDVCPVTFMKNSDFYEHYTSEHTERAICNFCFRTFMYEKNVKEHMLRHLDQFRHRCEECNKGFYTVREYRNHYKNRHMGIRHKCEECGRSFADEYYFKRHLATHGIKMNAVSTLSQLNETI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -