Basic Information

Insect: Philonthus spinipes
Gene Symbol: -
Assembly: GCA_963082785.1
Location: OY720310.1:2859084-2863884[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 22 0.084 13 7.7 0.2 1 23 181 202 181 202 0.96

2 22 2.9 4.6e+02 2.9 1.2 1 23 244 266 244 266 0.89

3 22 0.00011 0.017 16.8 3.1 1 23 269 291 269 291 0.98

4 22 0.12 20 7.2 3.3 1 23 297 319 297 319 0.97

5 22 7.8e-06 0.0012 20.4 2.4 1 23 326 348 326 348 0.98

6 22 0.00036 0.057 15.2 1.8 1 19 361 379 361 382 0.94

7 22 0.0063 1 11.3 0.6 1 23 390 413 390 413 0.95

8 22 0.014 2.2 10.2 0.9 3 23 438 457 437 457 0.97

9 22 0.0019 0.3 12.9 0.1 3 23 465 485 463 485 0.96

10 22 1.2e-06 0.00019 23.0 1.6 1 23 491 513 491 513 0.98

11 22 0.00024 0.038 15.7 1.2 1 23 519 541 519 541 0.97

12 22 0.0033 0.53 12.1 0.1 1 23 698 719 698 719 0.97

13 22 1.6 2.5e+02 3.7 0.5 1 23 761 782 761 782 0.90

14 22 0.00053 0.084 14.7 3.3 1 23 788 810 788 810 0.97

15 22 0.0078 1.2 11.0 1.9 1 23 816 838 816 838 0.97

16 22 9.2e-06 0.0015 20.2 3.4 1 23 846 868 846 868 0.97

17 22 0.016 2.6 10.0 3.9 2 21 882 901 881 902 0.92

18 22 0.00045 0.071 14.9 0.8 1 23 912 935 912 935 0.96

19 22 6.8 1.1e+03 1.7 0.5 6 23 944 961 943 961 0.68

20 22 7.1e-07 0.00011 23.7 1.6 1 23 967 989 967 989 0.98

21 22 2.4e-06 0.00038 22.0 0.1 1 23 995 1017 995 1017 0.97

22 22 0.00041 0.064 15.0 2.9 1 23 1023 1045 1023 1045 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	22	0.084	13	7.7	0.2	1	23	181	202	181	202	0.96
2	22	2.9	4.6e+02	2.9	1.2	1	23	244	266	244	266	0.89
3	22	0.00011	0.017	16.8	3.1	1	23	269	291	269	291	0.98
4	22	0.12	20	7.2	3.3	1	23	297	319	297	319	0.97
5	22	7.8e-06	0.0012	20.4	2.4	1	23	326	348	326	348	0.98
6	22	0.00036	0.057	15.2	1.8	1	19	361	379	361	382	0.94
7	22	0.0063	1	11.3	0.6	1	23	390	413	390	413	0.95
8	22	0.014	2.2	10.2	0.9	3	23	438	457	437	457	0.97
9	22	0.0019	0.3	12.9	0.1	3	23	465	485	463	485	0.96
10	22	1.2e-06	0.00019	23.0	1.6	1	23	491	513	491	513	0.98
11	22	0.00024	0.038	15.7	1.2	1	23	519	541	519	541	0.97
12	22	0.0033	0.53	12.1	0.1	1	23	698	719	698	719	0.97
13	22	1.6	2.5e+02	3.7	0.5	1	23	761	782	761	782	0.90
14	22	0.00053	0.084	14.7	3.3	1	23	788	810	788	810	0.97
15	22	0.0078	1.2	11.0	1.9	1	23	816	838	816	838	0.97
16	22	9.2e-06	0.0015	20.2	3.4	1	23	846	868	846	868	0.97
17	22	0.016	2.6	10.0	3.9	2	21	882	901	881	902	0.92
18	22	0.00045	0.071	14.9	0.8	1	23	912	935	912	935	0.96
19	22	6.8	1.1e+03	1.7	0.5	6	23	944	961	943	961	0.68
20	22	7.1e-07	0.00011	23.7	1.6	1	23	967	989	967	989	0.98
21	22	2.4e-06	0.00038	22.0	0.1	1	23	995	1017	995	1017	0.97
22	22	0.00041	0.064	15.0	2.9	1	23	1023	1045	1023	1045	0.97

Sequence Information

Coding Sequence: ATGCACACAGCGTACATATTCGTGTTGAAATACGAACGATCTTTTGAATTGTTAAAGAATCATTTGAGTGAAATACAACAAGCAAGTAATTCTTATGGAATTCAGCAATCGAGCAGCGATTATAAAATTGCGAAAGCATTATCGATTGAGATTGATGAAACGGGGGATTCTTGTGAGATGGTGAAAGTGTTACCTAAAGAAATTCAACAAGCGGGTGATTGTTTAGAGGTTGCGAAAGTGTTACCGAATGAAATTCAAAGCGTAAGGGATTGTTGTGGCAACATGAAAGTATTACCGAGCGAAATTCGACATTCTTATGGGATACCCAGGGAAATTCAGCAGtatgataatttttgtaatgaaataataagtaATGATGTTATGAAGCAGGCGGATGAGATATTTCTGGTTGAACACGATTACGCTTTGGGCAAcgatataaaaatcaaaatcgagCCGTCTTCCAATGAAAACATGAAGAAAATCTCTGTGGAAATGAAAGTAAAACAAGAAGTCGGGgatgctaaaataaaaaaattacaccaATGCCCGATTTGCACGGCGGAATTCAAAGCGACCGATCTTCCAGCACATTTAAAAACAcacaaatctttaaaaaaatacttgagcATTCCGAATGAATTCAAAGTGAAACCCTCGGTGAAGTTTTATTACAAGCAAAACCCGGCAAGGGAAATCGTTTCCATTCATAGGAGATCGATTAAACTGCACAAGTGTTTGCATTGTGAAATAGAGTTACCGGCTTTGGATTTGCGCGAACACATGAGGAGCCTTCACGGGATGTACACTTGCGACCAGTGCGATCGGGTCTTTAAAAGGATCAACCATTTGAATATGCACAAAATCAAACATATGAAGGAGTACCCATATCATTGTGGACAGTGCGGGAAAGGTTTTGTGATTGAGAAGAATTACAGCTGTCACATGTTGACGCATAAAACTGAGGAATACCCGTATCAGTGTGCCGATTGTGGTAGGGGTTTTTATAATCCGGAGCATTTGCACAGGCATCAATTCATTCACACGGAGAATATAACGTACACACAGAAATACTCGGTGTATTCGTGTCCGAATTGTTTGAAATCCTTTAAAAGCAAAGAGGATTTGAAAGAACACAACTGTGTTCCGGTTGcggtaaaaaaatcattcaaatgcGGAAAATGCGGTGTGGTTTTTAAAAACGGCAGCGCTTTGAGTTTTCACAGAAAAAGAGTGCATAAAGAAAAACGTGAAGTTAAACCCAACACAGAACCAccggttaaaaataaaattaaaacgaaaaaagtgttGTGCGCCGTTTGCGGAAAATGTTACACGAACTACTCGATTTACGCGCACATGTCCACGCATAAACAAGACCGGTTTCTGGATTGTCCCCAGTGTGGGAAATTGCTGAGCGGGAAGCAGCAGTTGAAGCAGCACTTGCTGGTGCATACGGGCGAGAAGCCTTTCGTTTGTCACGTGTGCGGGAAaagctttaataaaatgtacaatctGCAAGTGCACGAGAGGATTCATACAGGGAATCGCCGGCACGTCTGCGCAATCTGCAATAAAGGATTTTTGGAAAAATCGTACTTGAGAAAACATATGAATGTCCATAAGAAATctcaattAATTTGCGTGTGCGAAGAGAGTGATTTAAAATCACTCTTTGCTCCCATGGAAATCGAAGACATACAAGAAGAAAGTGTTATGACATTAGCCGATGTTTTTCTGAGGCTTACGTGCGAAACAATTAGCTCGGAAGACAGTCTGCCATATTTAATATGTACGAAATGCGCAGAGCTGATGTATTCCGgctatttattcaaaataaaatatgagaaatCACACAGTTTATTCCAAGAATATCTTCGGAAAGAAACGCAAACAGAAGAAATCAATTATGATGATATAGTTATTAAAATCGATTACGAAGATATCGAATGCAATGATATTAAAGAGGAGATTCTCATAATAAACGAAAACGAGGAGGTAAAGCGAGTTGAGTCTAATAATAAGAAAGTAAAACGAGCTGTCAcaaggaagaaattaaaaaaagagaccGACaacgaattgaagaaattacacCCGTGCCCGATTTGCACCGTGGAATTCCCCGCAAGCGAATTGCGACAGCACGCGAGGACGCACAATTCCTTAAAGAACTATTTGAGCATTCCGAAACAGTTCACGGTGAATCGCGGAACGAAATTCTATTACACCCACGACCCGAATAAAGCCGTGACCTCCATACACAATCAACCGGTGAAGATCCACAGATGTCCGGTTTGTAAAGTCGAGCTGCTGGCTTTGGAGCTGCGCCGGCACTTATCGACGCACCAATTCGAGACTGAATACAAGTGCGACCAGTGTGGTCGGATTTTCCGGAAAATCAACCACCTGAACACTCACAAAGTGAAGCATTTGAAGGAGTGCCCTTTTAAGTGCGAGCAGTGCGGGAAGGGGTTCGTTATACAGAAAAATTACGAGTGTCATGTACTCACGCATAAAGACGCCGACGAGTTGCCGCACGAATGCCCGCACTGCTTGAAGCGGTTTTCGAATCCTGAACACCTAAACCGGCACGTGATTATCCACACGGAGAACGTTTCATACGCCGTTAAATATAAAGTGTGTAAGTGCAGTAATTGCTTGCGGGCTTTTAAGGATAAGGACGAGTTGAAGGAGCATAAGTGCGTGCCGCTCAAACGTACCTACGTGCAAGTGTTTCGGTGTAAGTTGTGCGATGAGGTGTTTAAAAATTCGAATGTGCTTTACAGTCATAAACGGGCCGTGCATTGTTTAACGGGGGTGAAAGCTCTGTGTACGGTTTGCGGGCAGTATTCTTCGAATATTTACAACCATATGAAGATGCACAATGATGTGAAACCGTTCGAGTGTAACCAGTGCGATAAGCGGTTCACGACGAACAGGCAGTTGCAGCAGCATCTTTTGGTGCACTCGGGTTTGAAGCCTTTTATATGCAGCGTGTGCGGGAAggcgtttaataatatttacaacttgCAAGTGCACGAGAGGATTCATAAAGGTGATCGTTGCCATATTTGTCACGTTTGCGGTAAAGGATTTTTGGAAAAGTCGTAtttgaaaaaacatttgaatGTGCATGAAAAAGTCGAATAA
Protein Sequence: MHTAYIFVLKYERSFELLKNHLSEIQQASNSYGIQQSSSDYKIAKALSIEIDETGDSCEMVKVLPKEIQQAGDCLEVAKVLPNEIQSVRDCCGNMKVLPSEIRHSYGIPREIQQYDNFCNEIISNDVMKQADEIFLVEHDYALGNDIKIKIEPSSNENMKKISVEMKVKQEVGDAKIKKLHQCPICTAEFKATDLPAHLKTHKSLKKYLSIPNEFKVKPSVKFYYKQNPAREIVSIHRRSIKLHKCLHCEIELPALDLREHMRSLHGMYTCDQCDRVFKRINHLNMHKIKHMKEYPYHCGQCGKGFVIEKNYSCHMLTHKTEEYPYQCADCGRGFYNPEHLHRHQFIHTENITYTQKYSVYSCPNCLKSFKSKEDLKEHNCVPVAVKKSFKCGKCGVVFKNGSALSFHRKRVHKEKREVKPNTEPPVKNKIKTKKVLCAVCGKCYTNYSIYAHMSTHKQDRFLDCPQCGKLLSGKQQLKQHLLVHTGEKPFVCHVCGKSFNKMYNLQVHERIHTGNRRHVCAICNKGFLEKSYLRKHMNVHKKSQLICVCEESDLKSLFAPMEIEDIQEESVMTLADVFLRLTCETISSEDSLPYLICTKCAELMYSGYLFKIKYEKSHSLFQEYLRKETQTEEINYDDIVIKIDYEDIECNDIKEEILIINENEEVKRVESNNKKVKRAVTRKKLKKETDNELKKLHPCPICTVEFPASELRQHARTHNSLKNYLSIPKQFTVNRGTKFYYTHDPNKAVTSIHNQPVKIHRCPVCKVELLALELRRHLSTHQFETEYKCDQCGRIFRKINHLNTHKVKHLKECPFKCEQCGKGFVIQKNYECHVLTHKDADELPHECPHCLKRFSNPEHLNRHVIIHTENVSYAVKYKVCKCSNCLRAFKDKDELKEHKCVPLKRTYVQVFRCKLCDEVFKNSNVLYSHKRAVHCLTGVKALCTVCGQYSSNIYNHMKMHNDVKPFECNQCDKRFTTNRQLQQHLLVHSGLKPFICSVCGKAFNNIYNLQVHERIHKGDRCHICHVCGKGFLEKSYLKKHLNVHEKVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -