Basic Information

Insect: Philonthus spinipes
Gene Symbol: -
Assembly: GCA_963082785.1
Location: OY720303.1:30281788-30288746[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 0.00098 0.15 13.8 1.3 1 20 36 55 36 58 0.97

2 28 0.015 2.4 10.1 1.0 2 21 64 84 63 85 0.92

3 28 0.85 1.3e+02 4.6 0.7 2 23 94 116 93 116 0.94

4 28 0.001 0.16 13.8 0.1 1 23 124 147 124 147 0.97

5 28 5.2e-07 8.3e-05 24.1 1.2 2 23 152 173 151 173 0.97

6 28 0.0031 0.49 12.2 0.5 1 23 179 201 179 201 0.98

7 28 0.0076 1.2 11.0 3.5 1 23 207 229 207 229 0.93

8 28 6.6e-06 0.001 20.7 0.8 1 23 235 257 235 257 0.98

9 28 0.00084 0.13 14.0 4.6 1 23 263 286 263 286 0.93

10 28 5.5 8.7e+02 2.0 0.4 1 11 293 303 293 305 0.86

11 28 0.0011 0.17 13.7 0.9 1 20 306 325 306 325 0.98

12 28 0.043 6.7 8.7 1.4 3 21 335 354 334 355 0.95

13 28 0.052 8.2 8.4 1.8 2 23 364 386 363 386 0.90

14 28 0.013 2 10.3 0.3 1 23 392 414 392 415 0.96

15 28 6e-07 9.4e-05 23.9 0.5 2 23 420 441 419 441 0.97

16 28 0.0025 0.39 12.6 2.2 1 23 447 469 447 469 0.97

17 28 0.054 8.5 8.4 1.2 1 23 475 497 475 497 0.88

18 28 5.1e-05 0.0081 17.9 2.6 2 23 504 525 503 525 0.97

19 28 0.00012 0.018 16.7 0.6 1 23 531 553 531 553 0.96

20 28 0.14 22 7.0 0.2 1 18 560 577 560 577 0.90

21 28 0.0065 1 11.2 0.2 3 21 581 599 580 600 0.93

22 28 0.00022 0.035 15.9 0.1 2 23 611 633 610 633 0.93

23 28 1.1e-05 0.0017 20.0 0.4 3 23 649 669 648 669 0.97

24 28 0.00026 0.041 15.6 7.4 1 23 675 697 675 697 0.97

25 28 0.0051 0.81 11.6 2.6 1 23 703 725 703 725 0.90

26 28 0.0015 0.24 13.2 0.1 1 23 731 753 731 753 0.98

27 28 0.059 9.3 8.2 4.7 1 23 759 782 759 782 0.96

28 28 0.00042 0.067 15.0 1.7 1 23 789 811 789 811 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	0.00098	0.15	13.8	1.3	1	20	36	55	36	58	0.97
2	28	0.015	2.4	10.1	1.0	2	21	64	84	63	85	0.92
3	28	0.85	1.3e+02	4.6	0.7	2	23	94	116	93	116	0.94
4	28	0.001	0.16	13.8	0.1	1	23	124	147	124	147	0.97
5	28	5.2e-07	8.3e-05	24.1	1.2	2	23	152	173	151	173	0.97
6	28	0.0031	0.49	12.2	0.5	1	23	179	201	179	201	0.98
7	28	0.0076	1.2	11.0	3.5	1	23	207	229	207	229	0.93
8	28	6.6e-06	0.001	20.7	0.8	1	23	235	257	235	257	0.98
9	28	0.00084	0.13	14.0	4.6	1	23	263	286	263	286	0.93
10	28	5.5	8.7e+02	2.0	0.4	1	11	293	303	293	305	0.86
11	28	0.0011	0.17	13.7	0.9	1	20	306	325	306	325	0.98
12	28	0.043	6.7	8.7	1.4	3	21	335	354	334	355	0.95
13	28	0.052	8.2	8.4	1.8	2	23	364	386	363	386	0.90
14	28	0.013	2	10.3	0.3	1	23	392	414	392	415	0.96
15	28	6e-07	9.4e-05	23.9	0.5	2	23	420	441	419	441	0.97
16	28	0.0025	0.39	12.6	2.2	1	23	447	469	447	469	0.97
17	28	0.054	8.5	8.4	1.2	1	23	475	497	475	497	0.88
18	28	5.1e-05	0.0081	17.9	2.6	2	23	504	525	503	525	0.97
19	28	0.00012	0.018	16.7	0.6	1	23	531	553	531	553	0.96
20	28	0.14	22	7.0	0.2	1	18	560	577	560	577	0.90
21	28	0.0065	1	11.2	0.2	3	21	581	599	580	600	0.93
22	28	0.00022	0.035	15.9	0.1	2	23	611	633	610	633	0.93
23	28	1.1e-05	0.0017	20.0	0.4	3	23	649	669	648	669	0.97
24	28	0.00026	0.041	15.6	7.4	1	23	675	697	675	697	0.97
25	28	0.0051	0.81	11.6	2.6	1	23	703	725	703	725	0.90
26	28	0.0015	0.24	13.2	0.1	1	23	731	753	731	753	0.98
27	28	0.059	9.3	8.2	4.7	1	23	759	782	759	782	0.96
28	28	0.00042	0.067	15.0	1.7	1	23	789	811	789	811	0.97

Sequence Information

Coding Sequence: ATGAAGAGCATGGCCGAGATCAACTCAATCCTAGAATGGAGGCCAGGAGGGAAACGAAGAAGAGGGAGTCCCAAAACAACATGGCTACAAGAAGTTACgAAAAAATTTAAATGCGACCAATGCTCGAAATCTTACAAGGACATATACAATATGAAGCTGCACATGTGGGATCACAAGGAAAAAACCCTACCTTGCCCGAAATGCAAAACGAAACTCTTCTCCCACCAAGTCCTCCTCAGAAGACACATGAGCAAGTGCTCCATCCCGAAAGTCCAGCAAACGTGCGACATCTGCGGAAGCGTGCACGTCTCGGAAAGGGGCCTCAAGTTACACATGTACAAAAACCACCCCATCCCCAAACAGAAACAATTCAAATGCGACGTCTGCCGAGCCTCCTTCGAGAAACCCACCTTACTATGGATCCACCTCGAGAGGGACCACGGCCAGCTCGTCAGTTGCGATTTGTGCGGTAAGCAATTCAGGAGAGCGAAATACCTGCAAACACACATGAAAACCCATGACACGAGCTTGGGCTTCAACTGCGAACAGTGCGGGaggataattaaaacaaaaatcctcTTTGACGAGCACATGAAGATGCACGGAGAATGCGAGGGGCACGCTTGCGAGAAATGCTCGATGGTTTTCGTTTCCGCGAAGCAATTGAATCATCACAAGTCATTCCATTCGGAGGATTTCGAGTTTGTCTGCGATTACTGTTCAAAGGGTTTCCAGAGGAAATATGCGTTAGCACAGCATTTGCAGACGCATGCAGGAGCGAGACAGTTCAGTTGTTTTCGCTGTGGTAAAACTTATTCGAATAAAGGCAGTTTGAGGTCGCACAACCACCGCAGTCATGGGAAAAAGATTGTTAGTTACGATTGTGAGAAATGCGGGATTAATTATAAgcCCAGATTTAAATGCGACCAATGCTCGAGATCTTACAATGAACGATACGCTCTGAAGCAGCACATGTGGTGTCACAAGGAAAAAACCCTACTCTGTCCGAAGTGCAAAACGAAACTCTTCTCCCACCAAGTCCTTCTCAAAAAACACATGAAAGACTGCTCTATCCCGAAAGTCCAGCAAAAATGCGACACCTGCGGAAGCATGTACGCCTCGAAAAGGGCCCTCAAAGCCCACTGCAACAGAATGCACCCCATCCCCAAACAATTCAAATGCGACGCTTGCCTCGCCTCCTTCGAGAAACCAACCTTATTATGGATCCACATCGAGAGACACCACGACCAGCCAGTCAGTTGCGAATTGTGCGGTAAAGTCTTCACGAAAGCGAGATACTTGCGAATACACATGAAAACCCACGACTCGAACTCGGCCTTCGCATGCGAGCAGTGCGGgaggaaaattaaaacaaaaatccactttGATGAACACATGCAGAAGCACGAGGAATGCGAGGGGCATCCTTGCGATAAGTGCCCGTTGGTTTTCGTTTCCGCGAAGCAATTGAACTGTCACAAGTCTTTCCATTCGGAGGATTTCGAGTTAGTCTGCAAGTTCTGTTCGAAGGGTTTCCGGAGGAAATTTTTGTTTACGGAGCATATGCAGACGCATACGGGGAAGAGACCGTACAGTTGTCTTCTCTGTGATAAAACTTTTCCGAATAAAAGCAGTTTGGGGATGCACAACATGTCTCATACGAGGAAGAGGGTGAGTTACGATTGTGAGAAATGCGGGATGATTTATAAGTCGCAAAGGGCTTTCGAAAGAACCGTGTTTTGCCCGAAATGCCCAAAACGGTTCTCATCAGAACTCTACCTCGACATCCATTTAAAAAACTGCGTTCTATTCCCGGGCAAAGACCCGAACCAGTGCGAGCTCTGCGGCATCGAATACACCTCGCAGTTCTGGCTGAATCGCCACATGGCGGACATCCACGTCCCCCAAATCAAATCAGCGGCAGTAGAGAAAAGCGAAAATATCTGCGAATCATGCGGGAAATCGTTCGCGTCCGTTAAACTCCTCAAAGCCCATATGAAGAGACACGAGCCCAACTCGACCCACACATGCGAGAAGTGCGAAAAGAGTTTTACGCATATGTACCTCTTCAAACGGCATATGGATAAGCATGCTGAGGGTAGGGAGCACGCTTGTCCGAAATGCCCGAAGGTGTTTGCGTCCGCGCACGAATTCGACCAGCACAAGTTTTTCCATACTGAGGATTTTAAGTATATTTGCCAGATTTGTTCGAAGGGTTTTATGTCGAATTGGGTTTTGGTCGGGCACCTGCGGACGCACGCTGGTTTGAAGCCCTACGCTTGTAGGTTGTGTGATAAGAGCTATCACTCAAAGTCAATCCTGACGAATCATGTGAATCGGTGCCATAATGGGAAGAAAGTTAGTTATGACTGCGATAAGTGTGACGTGAGTTTTAAAACGAAATTGGCGTTTGTGAAGCATAAAAAAAGccatgaatga
Protein Sequence: MKSMAEINSILEWRPGGKRRRGSPKTTWLQEVTKKFKCDQCSKSYKDIYNMKLHMWDHKEKTLPCPKCKTKLFSHQVLLRRHMSKCSIPKVQQTCDICGSVHVSERGLKLHMYKNHPIPKQKQFKCDVCRASFEKPTLLWIHLERDHGQLVSCDLCGKQFRRAKYLQTHMKTHDTSLGFNCEQCGRIIKTKILFDEHMKMHGECEGHACEKCSMVFVSAKQLNHHKSFHSEDFEFVCDYCSKGFQRKYALAQHLQTHAGARQFSCFRCGKTYSNKGSLRSHNHRSHGKKIVSYDCEKCGINYKPRFKCDQCSRSYNERYALKQHMWCHKEKTLLCPKCKTKLFSHQVLLKKHMKDCSIPKVQQKCDTCGSMYASKRALKAHCNRMHPIPKQFKCDACLASFEKPTLLWIHIERHHDQPVSCELCGKVFTKARYLRIHMKTHDSNSAFACEQCGRKIKTKIHFDEHMQKHEECEGHPCDKCPLVFVSAKQLNCHKSFHSEDFELVCKFCSKGFRRKFLFTEHMQTHTGKRPYSCLLCDKTFPNKSSLGMHNMSHTRKRVSYDCEKCGMIYKSQRAFERTVFCPKCPKRFSSELYLDIHLKNCVLFPGKDPNQCELCGIEYTSQFWLNRHMADIHVPQIKSAAVEKSENICESCGKSFASVKLLKAHMKRHEPNSTHTCEKCEKSFTHMYLFKRHMDKHAEGREHACPKCPKVFASAHEFDQHKFFHTEDFKYICQICSKGFMSNWVLVGHLRTHAGLKPYACRLCDKSYHSKSILTNHVNRCHNGKKVSYDCDKCDVSFKTKLAFVKHKKSHE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -