Basic Information

Insect: Philonthus spinipes
Gene Symbol: PNPO
Assembly: GCA_963082785.1
Location: OY720302.1:20692149-20714870[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 2.9e-05 0.0045 18.7 1.0 1 23 2 23 2 23 0.98

2 18 2.5e-06 0.00039 22.0 0.1 1 23 29 51 29 51 0.98

3 18 6.2e-05 0.0098 17.6 0.1 1 23 57 79 57 79 0.96

4 18 0.00011 0.017 16.9 2.0 2 23 93 114 92 114 0.96

5 18 6.6e-05 0.01 17.5 0.8 1 23 133 155 133 155 0.96

6 18 2.8e-05 0.0043 18.7 0.8 1 23 160 182 160 182 0.95

7 18 7.8e-06 0.0012 20.4 1.0 1 23 188 210 188 210 0.99

8 18 1.4e-06 0.00022 22.8 3.3 1 23 216 238 216 238 0.98

9 18 1.4 2.2e+02 3.9 0.3 2 23 392 415 391 415 0.87

10 18 4.2e-05 0.0066 18.1 1.0 1 23 421 442 421 442 0.98

11 18 4.7e-06 0.00074 21.1 0.3 1 23 448 470 448 470 0.98

12 18 1.5e-07 2.4e-05 25.8 0.2 1 23 476 498 476 498 0.99

13 18 0.00013 0.02 16.6 1.2 2 23 515 536 514 536 0.96

14 18 5.5e-06 0.00086 20.9 0.8 1 23 555 577 555 577 0.96

15 18 1.1e-06 0.00017 23.1 0.2 1 23 582 604 582 604 0.95

16 18 3.2e-06 0.0005 21.6 0.4 1 23 610 632 610 632 0.99

17 18 6.8e-06 0.0011 20.6 4.9 1 23 638 660 638 660 0.96

18 18 2.9e-06 0.00046 21.8 1.1 1 23 666 688 666 688 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	2.9e-05	0.0045	18.7	1.0	1	23	2	23	2	23	0.98
2	18	2.5e-06	0.00039	22.0	0.1	1	23	29	51	29	51	0.98
3	18	6.2e-05	0.0098	17.6	0.1	1	23	57	79	57	79	0.96
4	18	0.00011	0.017	16.9	2.0	2	23	93	114	92	114	0.96
5	18	6.6e-05	0.01	17.5	0.8	1	23	133	155	133	155	0.96
6	18	2.8e-05	0.0043	18.7	0.8	1	23	160	182	160	182	0.95
7	18	7.8e-06	0.0012	20.4	1.0	1	23	188	210	188	210	0.99
8	18	1.4e-06	0.00022	22.8	3.3	1	23	216	238	216	238	0.98
9	18	1.4	2.2e+02	3.9	0.3	2	23	392	415	391	415	0.87
10	18	4.2e-05	0.0066	18.1	1.0	1	23	421	442	421	442	0.98
11	18	4.7e-06	0.00074	21.1	0.3	1	23	448	470	448	470	0.98
12	18	1.5e-07	2.4e-05	25.8	0.2	1	23	476	498	476	498	0.99
13	18	0.00013	0.02	16.6	1.2	2	23	515	536	514	536	0.96
14	18	5.5e-06	0.00086	20.9	0.8	1	23	555	577	555	577	0.96
15	18	1.1e-06	0.00017	23.1	0.2	1	23	582	604	582	604	0.95
16	18	3.2e-06	0.0005	21.6	0.4	1	23	610	632	610	632	0.99
17	18	6.8e-06	0.0011	20.6	4.9	1	23	638	660	638	660	0.96
18	18	2.9e-06	0.00046	21.8	1.1	1	23	666	688	666	688	0.99

Sequence Information

Coding Sequence: ATGTATGTCTGCACGGAATGTGGAAAATTGTTTACCAACACTAAGTTGATACAGCACATGAGATCTCACACAAAGGAAAAACCTTTCGTGTGCACTGTTTGTGGCATAGGGTTTTCTGTTAGAGGGAATTTGAATAGGCACGTGATGACACACACGGGGGAAAAGCCGCATGTTTGTGATATCTGCGGAAAAGgtTTTATACAATCAAACGCTTTAGTGGTCCACAAGGCGATGCATATCCGCAAAGAAAAAAGTGACGGCCAAGCCTTGAATCTAGTGTGCAATTATTGCGGTCGGAGTTTCAAACATGAGGCTCGATTTAACACTCACTTAATCCGGCATTTTTCTATAGGTAGAAAACAAGAGAGGAACGATAAAGTCGAGAAACCGAAAGAGTACCTGTGTGAAATTTGCAATCGCGCTTACAAAACCAAAAATCAATTAAGGGTCCATTCATTGACTCATGGGGAAAAGAGGTTTTTATGCTCACACTGTGGGAAGGCGTTTAAGACTAGTGCAGCTCTGGACTCACATGAGAaggTGCACACTGGAGAAAAACCCTACAAATGCACCATATGCAAAAAGGCGTTTGCACAAATTTTCAGCTTCAACGTGCACATGTTAACACACACCGGCGAAAAACCCTATGCTTGCGACATCTGTGGTAGAACATTCAAACAGTCCACGCACCTGATGTACCACAAAAGGACACACAGTGAATTCCATACATTTGAAGAAAAATGTGTGAGGAATGAGCAGATACTTTTAGGGTTACATGAAAAGCTGGTGAGTGATGTATTAGAATATTCGACATCAGGAGGAAATAATGTTGAAAGTGAAAATGAAGAAGTTCtttcttcaattaaaatagAAGAAGAAGGAATTCAAATCCCAGCAATTGAAGCAGAAGAAAAATGTGATCCTATATCAGAAGAAAATGTTGCTGTATCTGAAGTCGCAATAAAACCAGCAAAAGAAAATGTTCATCCTGTGTCAAAGGAAATATTCTATTTAGTTGAAATTCCAACAATACCAACAAAGGAAAATGCTGATCCCGTGTCAAAAGAAATGTCTGTTGCAATTGACCCAACAGCACCGGCAAAAGAAAATGCTAATCCTCCTTCAAAAAGTAAATCtgtgtcaaagaaaaaatcgaaTGTTAAAAAAGGCGTTAAATGCATATATTGCGATGTGGTTTGTGCAAGCCAGATTGCTTTAATCGAACATAAGAAAAAGGCGAAGCATCCGAAAAGGAGGATGTATGTCTGCACGGAATGTGGAAAATTGTTTAGCAGCAATAAGTTGAGAGAACATATGAGATCTCACACAAAGGAAAAACCTCACGTGTGCACCATTTGCGACGCAGCGTTTTCTGTTAGAGGGAATTTGAATAGGCACGTTATGACACATACAGGAGAAAGGCCGTATGTTTGTGATATCTGCGGAAAAAgtTTTATACAATCGAACTCTTTAGTGGCACACAAGAGGACGCACATCAACAAAGAGAAAAGAGAGAGTAGTGTTGGAAAACAAATGAATCTGGTGTGCAATTATTGTGGGCAGAGTTTCAAAAATGAGCGACGTTTCAACACTCACTTAATCCGGCATTTTTCTGCAGGTAGCAAACAAGAGGGGAATGATAAAGCCGAAACACCTAAAAAGTACCTGTGCGAGATATGCAATCGCGCTTACACaaccaaaaaacaattaaaggtCCATTTATTGACTCATGGAGAGAGGAGATTCTTATGCTCAGACTGCGGGAAGGCGTTTAAGACTAATGCGGCTCTGCAAACACATGTGAAgGTGCACACTGGAGAAAAACCTTACAAATGCACCATATGCGAAAAGGCCTTTACACAAATTGGCGGCTTCAAGGTGCACATGTTAACACACACTGGCGAAAAACCGCATGCTTGCGACATTTGCGGCAAAACATTCAAACAGTCCACGCACCTGATGTACCACAAAAGAATGCACAGCGGCGAACGGCCATACAGCTGCTCGTTTTGCGAAAAGAGTTTCGCCATCAAAAACAACTTAAAAGTACACATCCGCACTCACACTGGCTTGAGGACAGCTTACAATGAAAGGACAAAGTTGTTAATGGAAGACAATTTATCAAACAAGGATCCCATTGCAATTTTTCATGAATGGTTTGATGAGGCGAAGAATGACAAAGATGTAATAGAACCCAACGCAATGTGCTTAGCGACCTGCACAaaGGACGGAACCCCTTCTGCACGTTTTGTATTATGCAAAGGCTTTGGAAAGGATGGCTTCAAATTTTTCACTCATTACACAAGCCGGAAAGGACAGGAATTGgAAGAAAACCCGAAAGCCgctttaacttttttttggGCCTCCTTGAGTAAATCGGTGCGGATTGAAGGAAATGTCGACAAGTTACCGATGTCAGAAGCTGAGTCTTACTTCAGTGGCCGACCTTATGTTAGCCAAATTGGAGCACTCTGCAGCGACCAAAGCAAACCGATAGCAGGTCGAAAGGTGCTCATGGAGAAAGAGTCAGAGCTAAAGAACCGGTATAAGGAAGGAGAGGTTCCAAAACCAGAATTTTGgggTGGATATATCGTAAAGCCTAAAGTGATTGAATTCTGGCAGGGGCAAACCGATAGGATACACGATAGGATTAAATTCTTCAGGCCAGAACAAGGGCAGTCCGCTGATAATGAGATAATATATGGCGGTGATGACGGATGGTTGTATTCTAGATTGGCACCATAA
Protein Sequence: MYVCTECGKLFTNTKLIQHMRSHTKEKPFVCTVCGIGFSVRGNLNRHVMTHTGEKPHVCDICGKGFIQSNALVVHKAMHIRKEKSDGQALNLVCNYCGRSFKHEARFNTHLIRHFSIGRKQERNDKVEKPKEYLCEICNRAYKTKNQLRVHSLTHGEKRFLCSHCGKAFKTSAALDSHEKVHTGEKPYKCTICKKAFAQIFSFNVHMLTHTGEKPYACDICGRTFKQSTHLMYHKRTHSEFHTFEEKCVRNEQILLGLHEKLVSDVLEYSTSGGNNVESENEEVLSSIKIEEEGIQIPAIEAEEKCDPISEENVAVSEVAIKPAKENVHPVSKEIFYLVEIPTIPTKENADPVSKEMSVAIDPTAPAKENANPPSKSKSVSKKKSNVKKGVKCIYCDVVCASQIALIEHKKKAKHPKRRMYVCTECGKLFSSNKLREHMRSHTKEKPHVCTICDAAFSVRGNLNRHVMTHTGERPYVCDICGKSFIQSNSLVAHKRTHINKEKRESSVGKQMNLVCNYCGQSFKNERRFNTHLIRHFSAGSKQEGNDKAETPKKYLCEICNRAYTTKKQLKVHLLTHGERRFLCSDCGKAFKTNAALQTHVKVHTGEKPYKCTICEKAFTQIGGFKVHMLTHTGEKPHACDICGKTFKQSTHLMYHKRMHSGERPYSCSFCEKSFAIKNNLKVHIRTHTGLRTAYNERTKLLMEDNLSNKDPIAIFHEWFDEAKNDKDVIEPNAMCLATCTKDGTPSARFVLCKGFGKDGFKFFTHYTSRKGQELEENPKAALTFFWASLSKSVRIEGNVDKLPMSEAESYFSGRPYVSQIGALCSDQSKPIAGRKVLMEKESELKNRYKEGEVPKPEFWGGYIVKPKVIEFWQGQTDRIHDRIKFFRPEQGQSADNEIIYGGDDGWLYSRLAP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -