Pspi013586.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Philonthus spinipes
Gene Symbol
-
Assembly
GCA_963082785.1
Location
OY720304.1:32229577-32259396[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 50 0.14 22 7.1 0.3 1 23 71 93 71 93 0.98
2 50 1.8e-05 0.0028 19.3 0.2 1 23 101 124 101 124 0.96
3 50 0.0076 1.2 11.0 2.5 1 23 130 152 130 152 0.95
4 50 0.021 3.3 9.6 2.4 2 21 159 178 159 180 0.93
5 50 0.00078 0.12 14.1 2.9 2 23 192 214 191 214 0.96
6 50 0.36 56 5.8 1.2 1 14 219 232 219 233 0.93
7 50 0.0037 0.58 12.0 1.2 1 23 280 302 280 302 0.98
8 50 0.00032 0.051 15.3 1.6 1 23 308 331 308 331 0.98
9 50 0.00019 0.03 16.0 1.8 1 23 337 359 337 359 0.95
10 50 1.2e-05 0.0018 19.9 0.2 1 23 385 408 385 408 0.96
11 50 0.0012 0.19 13.6 1.2 1 23 414 436 414 436 0.98
12 50 0.00013 0.021 16.6 1.0 1 23 442 464 442 464 0.99
13 50 5.4e-07 8.6e-05 24.1 2.8 1 23 471 494 471 494 0.97
14 50 7.3e-06 0.0012 20.5 1.4 1 23 530 553 530 553 0.96
15 50 0.0002 0.032 16.0 1.4 1 23 559 581 559 581 0.96
16 50 0.12 20 7.2 2.5 1 23 604 627 604 627 0.95
17 50 0.00031 0.048 15.4 0.2 1 23 634 657 634 657 0.91
18 50 0.0017 0.27 13.0 0.1 1 23 663 685 663 685 0.97
19 50 7.2e-05 0.011 17.4 2.1 1 23 691 713 691 713 0.98
20 50 4.4e-05 0.0069 18.1 4.6 1 23 720 742 720 742 0.98
21 50 7.3e-06 0.0012 20.5 1.4 1 23 781 804 781 804 0.96
22 50 0.00013 0.021 16.6 3.4 1 23 810 832 810 832 0.96
23 50 0.00013 0.02 16.6 0.6 1 23 852 875 852 875 0.96
24 50 8.9e-05 0.014 17.1 0.3 1 23 882 905 882 905 0.96
25 50 3.3e-05 0.0052 18.5 0.2 1 23 911 933 911 933 0.97
26 50 0.0025 0.39 12.5 1.7 1 21 939 959 939 960 0.95
27 50 5 7.9e+02 2.2 4.0 2 23 969 990 968 990 0.96
28 50 0.00028 0.044 15.5 0.9 1 23 1068 1090 1068 1090 0.99
29 50 7.6e-07 0.00012 23.6 1.7 1 23 1097 1120 1097 1120 0.97
30 50 0.00016 0.026 16.3 0.3 3 23 1128 1148 1126 1148 0.98
31 50 4.3e-06 0.00068 21.2 0.2 2 23 1171 1193 1170 1193 0.96
32 50 1.6e-05 0.0026 19.4 2.0 1 23 1199 1221 1199 1221 0.97
33 50 5e-05 0.0079 17.9 2.3 2 23 1228 1249 1227 1249 0.97
34 50 0.46 73 5.4 0.4 1 23 1258 1281 1258 1281 0.86
35 50 0.0015 0.23 13.3 1.2 3 23 1343 1364 1342 1364 0.94
36 50 0.0015 0.24 13.2 0.4 1 21 1370 1390 1370 1391 0.94
37 50 0.00061 0.096 14.5 0.5 2 23 1423 1445 1423 1445 0.94
38 50 0.073 12 7.9 4.7 1 23 1451 1473 1451 1473 0.88
39 50 0.00016 0.026 16.3 1.3 2 23 1480 1501 1479 1501 0.97
40 50 0.075 12 7.9 0.6 1 23 1512 1532 1512 1532 0.92
41 50 0.0073 1.2 11.1 0.0 2 23 1602 1623 1601 1623 0.97
42 50 6.5e-05 0.01 17.5 4.0 1 23 1629 1652 1629 1652 0.97
43 50 6.6e-05 0.01 17.5 0.4 1 21 1658 1678 1658 1679 0.95
44 50 0.00021 0.033 15.9 0.5 2 23 1711 1733 1711 1733 0.94
45 50 0.2 31 6.6 1.3 1 23 1739 1761 1739 1761 0.77
46 50 4.3e-05 0.0068 18.1 1.6 2 23 1768 1789 1767 1789 0.97
47 50 2.4 3.7e+02 3.2 0.4 1 20 1799 1815 1799 1819 0.73
48 50 0.26 42 6.2 0.8 1 23 1825 1847 1825 1847 0.95
49 50 3.2e-06 0.0005 21.7 3.4 2 23 1854 1875 1853 1875 0.98
50 50 0.4 63 5.6 0.3 1 23 1885 1905 1885 1905 0.81

Sequence Information

Coding Sequence
ATGGCGGAACGCAACTACATTCCGGTGTGTCTTGACATGTCAACCGATATTCTTTGTGAACCCTGGTCTGATTTAAGTATCACCAATGAAGAATTAGTTTTAAAGTCTGAAGACCAAAGCGAAGACATATCCAGCGCTGAAGAGGGAGGAGAAACCCCCAGAAAAAACGGCCGAGACAATCTGATTAAGACCAAAAATGGTAAAGCCCTTTACTCCTGCGACGAGTGCGATAATATCTCTAAGGACGCTAAAAAATTCGTCATTCACTACCTCTCGCACAACAAAGACAAATCTCGCATATACACCTGCGAGCAGTGCCTCCAAAGATTCACGCAGCCCGGCAACTTGAAACGCCACATAGACGTGGTCCACCTGCGGATCAGGAAGTTTTGCTGTAAAATATGCGAGACCACGTTTTCGACCAAGTCCGCCAGGGACGACCACATGACGGCCCATTACGATGGGCGATCGAATGTGTGCGCCACTTGCGATGAGAGTTTCGAAAGTAAACGCGCTTTAAGAAATCACAGGAAGTGTCACTTGGGGAGGAGCGATCATAGTAATGAGAGGAAGACGTGTGATACTTGTAATCAATCGTTTAAGTTGAAACAGAGCTTGAAGCGGCATATCGAGAGGAAGCATTTGCAGcttaaatattattgtgaagTTTGCAAGAAGTTGTTTACTAATAAGTCGTCTGAAGATGCACATCCTAATTCCACCAATTGGAAAGAATCAACCGATGACGCGCAAACAAAAACAGACGAAGAAGCGAAGCACCATCAATCATTAATCAAACAGCGCTGTAGAATTAAGAATGATGATGGCACCACGTGCTTCAAATGTGACATTTGCGATAAGATAATCAAAAAAACGAGCAATTTCCTCGACCATTACACGATGCACAGCAACAATTTAACGTACACTTGCGAAATTTGCTGCAAATCCTTAAAACTCCCCTCCAACTTAAAACGCCACATGGAAACGATACACATGCAAATCAGAAAGTTCGATTGTAAAATTTGCAACAAGAGCTACGCCACTAGATCCGGGCTATACAAGCACACGTACAACCACACCAGCAGCCGACCTTACGAGTATTCCAAAAAGGCGAGTTACCCTGAACTCGCTAAAGAATTGGCAGAGAAAAAATATACCTGCGATGTTTGCGATAAGAGCTTCGCGAAGCCGGACAGGTTAAAACGGCACGTCGAGTCGGTGCATATGCAGATTAAGAAGTTCGTGTGCGATCTTTGTGATAAACGATTTAATTCGAAAGTTACGCGGGATGAGCATATGAATAAGCACAGTAATAGGCGGCCTTTTAAATGCGAGGTCTGTAGCAAACGTTACAGCTATGGGTCTGGATTAAGGGCGCACTTAAAGAGGCATATTTTAGATGGGAAACAGTACACTTGTGATATTTGTGATAAGCGGTTTATACAAAAGAGTCACATGACTCGGCATATGAAGTTGGTGCATGCGAAAAGTCCGGAAAGTGATCTTGGGATAAGGCACACGGAGAATGATTTTGTTAACTCTGAGAGTTGCACAAATAGGAAAGATGATGAAATTGGCAATCTTACCTATACTTGCGATATCTGCTACAAGACCTTCAATAaaccaacaaatttaaaacgacACGTGGAGCGTATGCACATGCAAGCCAAGAAGTTTAACTGCAACCTCTGCGACAAAGTCTATTCCTCTTATTCCGGCCTATACAGGCATAGGTTCATCCACTCTAATAACAAATCGTATAAGGCCATCAAAAACCCGATTAAAAAAGAAGTCGATGAGGGAACAAAGCACAGTTGcgatatttgcaataaaaacttTGAGTGTCCAGCGAAGGTTAAGCGACACCTAGATACTGTCCACAAGCAAGCGGGGAAGCCGCACACTTGcgatatttgcaataaaagcTTCGCGATGGCGTACGGGCTGAGGCAACACGTCGAGGGGGTGCATATGCAGATTAAGAATTTCGTGTGCAATATTTGCGATAAGAGATTCATTGCGAAACGCGTTCTCGACGAGCATATGAATGCTCATACTAACAGTCGGCCGTTTAAATGCGAAACCTGCGACAAgcaatttaattacttatctAGTTTACGGATGCACTCGAGGATACATTCGGCCAATGGGAAGCCGTTTTCTTGTGAGCTTTGCTATAAACAGTTCTCGCAAAAGATTCACCTCAAGCGGCATATGTTGAGGCACGCGAAACGTTCCGGAATTGACTGTACAGAGAAGAACGAGGAAAAACCCTTTAGTAGTACTGAGATTATGGAGAGTGACAGTAATAGCAAGGACGATGCATATGGCAATCCCACCTATACTTGCGATATCTGCTACAAGACCTTCAATAAGCCAACAAATTTAAAACGCCACGTGGAGCGTATGCACATGCCAGCCAAGAAGTTTAACTGCAAACTCTGCGACAAAGTATTTTCCTCTCATTCAGGTCTATACAGGCATAGATTCATCCACTCTAATAACAAATCGTATAGCGCCATGAATAAAAAAGAAGTTGATGAAGGAACGAAGCACAGTTGcgatatttgcaataaaaacttCGAGGGTCCAGCGAAGCTTAAACGGCACCTTGATACTGTCCACAAGCAAGCGGGGAAACCGCACACTTGCGAGATTTGCAATAAAAGCTTCGCGATACCGTACGGGCTGAGGCAACACGTTAAGGTGGTGCATATGCAGATCAAGAATTTCGTGTGCAATATTTGCGATAAGAGATTCATTGCGAAACGCCTTCTTAACGAGCACATGAATGCTCATACTAACAGTCGGTCCTTTAAATGCGAAACCTGTGATAAACAATTCCATTACTTATCTAGTTTGCAAATGCACTCTAGGATAAATTCGGCAAATGGGAAGCAGTTATCTTGTGAGCTTTGTTGTAAGCAGTTCTCGCAAAAGATTCGCAACAAGTGGCACATGTCGAAGCACGAGAAACATTCTGGGATTGATTGTACGAAGAAGCACGAGGAGAAACCTTTTAGTAGTACCGAGATTGACTGTAATAGCAAGGACGATGTATTTGGGTCATCTGAAGGCGCACATCCTGTTACAATCAATTTGGAAGAAACAACAACCGACGCATATAAAAAACCGATTCAGctcgaaaaattattaattaaacagcgTTGTAAAATCAGAAACGACGACGGCACCGTTGCGTTCAAATGCGATATATGcgataaaatagttaaaaaaggTAGTAACTTCCTCGACCATTACAGGACGCACGATCGAGATAAGTCGCCGTTTAGTTGTGAACTTTGCGAGAAAACCTTCAGGCATCCCTCTAATTTAAAACGCCACGTCGAGACGATACACATGCAAATCAAAAAATTCGGCTGTGAACTCTGTGACGAGAGGTACACTTCGAAAGTCGCACTATACCGGCACATGCTCACCCACCCGGGTAGCCGGCGTAATAATTCGGACAAAGAAACGCGCAAAGAAGAAGCGACTGTGAAAAAACTCATTTGCGATGTTTGCAATAAAGTCTTTAAAACAGTTCCTAATTTAAGGAGACACGTCAGGACTGTCCATATGCAGATTAAGAATTTCGCGTGCAATATTTGCGAAAGGAGATTCTGCACGAAGGTTAATCTAGACGAGCATATGAACACGCACGATAACAGCCGGCCTTTGAAATGCGATATTTGCAACCAACATTTTAACAATGGGTCTGGTTTAAGGAGGCACATGAAGAGCCACATTGCCCACGGGAATAAGAGGATGTATAAGTGTGGTATTTGTGATAAGCAGTATTTACACATGCCCGACATAAAGCGGCACGTGATGGCGGTGCACTTGAAAATTTCGCTCACTGAACACACGAAACAACTCAGGGAGAAACAGTGTATTCAGAGTAAAGATGATAATTATagGTCATCTCAAGACACTCGGTCTACTTCCTCCAGTTGGAAAGAAACAACCGACAGTGGATTTAAGAAAACGAGCAAGAGGttacgcaataaaaataatccgaATAATTGCGATATTTGCAATAAATCATTTACGGATCAATGGGATTTGAGATGCCACGTCGAGACGATACACAAGCAAAACAAAAAGTATATCTGCGACGGTTGCTATTTAAGATTTTCAAACCGAACCAGTTTAAAGAATCACAGGGCTACATGTGCACAAGTTGGTTTGGATAATGATAACAACATCCACTCCGAGAGCGATGAGGATAATGAACGAAGGGAAAGAGAAGCGCAGATATCGAACACTTGTGTCATTTGCAATAAAACCTTGTCGTCGTTGACTAATTTAAAGCGGCACGTCGAGTCGGTGCacatgcaaattaaaaaattcgaaTGCCACATTTGCAATAAGAGATTTTCTTCAAAATGTGTTAGAGACGAGCATTTGGACACGCACAGCAACAAGCGGCCTCTTAAATGCGATTTGtgcgataaatattttaagaacaaGCCTGGTTTGAGGACTCACAAGAAGGTGCATTTTAACAGCAGGACGAAAAATACTAGAATTTATACGTGTAATATTTGCGATAAGCAGATTTCTAACTTAAAACGGCACCTTCAGTTAGTGCACAAGATAGCTCCGGATAATGGCAGTACGAAAGAGCAAACGAGGAACGAGTTTGGTAGCGCTGAGATTATTGAGAATGATACGAATTCTAAAGAGAGTGAATATGGGTCATCTCAAGACACTCAGCCTACTTCCTCCAATAGGAAAGAAACAACCGACAATGAATATAAAGAAACGGACGAAGCGAAAATAAGGAATGATGACGGTACTGTATGCAATATTTGTGATGAAACACTCGAAACGGGAAGTAATTTAGTCGACCATTACAtgatacacaataaaatgaatccGTATAATTGCGATATTTGCAATACATCATTCACGCATCATTCGGATTTGAAATCCCACGTGGAGACGACGCACAAGCAAGACAAAAGGTACATCTGCGAAGGTTGCAATATAAGATTTAGAAACCGAAAGAGTTTAAAGAATCACATGGCTAAATGTAAAGAAGGCGGTTCGGATAATGATAACAACACCTACCCCGGGAGCGATGAGGATAATGAAGAAAGTGAAACAGAAGCGCAGAAAACGAACACTTGCGTCCTTTGCAACAAAAGCTTCGCGACGATGACCAATTTAAAGCGGCACGTCGAGTCGGTGCAcatgcatataaaaaaattcgagtgcgatatttgcaataaaagattttttacgAGATTTATAAGGGACGAGCATATGGACACGCACAGTAATAACCGACCTCTTAAATGCGATATGtgcgataaatattttaagaaccGGTCTGGTTTAAGGGATCACAAGAAGATTCATCTTAacaagaagaggaagaagaaacTACATACGTGCAATATTTGCGATAAGCAAATATATAACTTGAACCAACACCTTGCGGCGGTGCACACGCAAATTAGAAACTTCGAGTGCGATTTTTGCGATaaaatttttttaacgaaatttctTAAAGACGAGCATATGGCCACGCACAATGACGAACGGCCTGTTAAATGCGACATCTGTGATAAATGTTTTAAGAACCGGTCTGGTTTAACGGTTCACAAAAGGAGGCATTTTCCTCAgaagaggaaaaataaaatgtacagaTGTAATATTTGCGATAAGCAGATATATAACTTAAATCGGCACCTTGCGGCGGTGCACAAGGTAACTCCAGAAAAATACACAACGGTAGAGCAAATAAAGAACGAGTTTGATCGCGCTGGCATTATTGAGAATGATACAAATTCTAAAGAGAGTGAATATggaTCTGATGACCTTATCATCAAAGAAGAGTTACCCTCAGATTCCGAAGATCCACTACAAGATGATACGATGGAATTGTCGAGCTACTGA
Protein Sequence
MAERNYIPVCLDMSTDILCEPWSDLSITNEELVLKSEDQSEDISSAEEGGETPRKNGRDNLIKTKNGKALYSCDECDNISKDAKKFVIHYLSHNKDKSRIYTCEQCLQRFTQPGNLKRHIDVVHLRIRKFCCKICETTFSTKSARDDHMTAHYDGRSNVCATCDESFESKRALRNHRKCHLGRSDHSNERKTCDTCNQSFKLKQSLKRHIERKHLQLKYYCEVCKKLFTNKSSEDAHPNSTNWKESTDDAQTKTDEEAKHHQSLIKQRCRIKNDDGTTCFKCDICDKIIKKTSNFLDHYTMHSNNLTYTCEICCKSLKLPSNLKRHMETIHMQIRKFDCKICNKSYATRSGLYKHTYNHTSSRPYEYSKKASYPELAKELAEKKYTCDVCDKSFAKPDRLKRHVESVHMQIKKFVCDLCDKRFNSKVTRDEHMNKHSNRRPFKCEVCSKRYSYGSGLRAHLKRHILDGKQYTCDICDKRFIQKSHMTRHMKLVHAKSPESDLGIRHTENDFVNSESCTNRKDDEIGNLTYTCDICYKTFNKPTNLKRHVERMHMQAKKFNCNLCDKVYSSYSGLYRHRFIHSNNKSYKAIKNPIKKEVDEGTKHSCDICNKNFECPAKVKRHLDTVHKQAGKPHTCDICNKSFAMAYGLRQHVEGVHMQIKNFVCNICDKRFIAKRVLDEHMNAHTNSRPFKCETCDKQFNYLSSLRMHSRIHSANGKPFSCELCYKQFSQKIHLKRHMLRHAKRSGIDCTEKNEEKPFSSTEIMESDSNSKDDAYGNPTYTCDICYKTFNKPTNLKRHVERMHMPAKKFNCKLCDKVFSSHSGLYRHRFIHSNNKSYSAMNKKEVDEGTKHSCDICNKNFEGPAKLKRHLDTVHKQAGKPHTCEICNKSFAIPYGLRQHVKVVHMQIKNFVCNICDKRFIAKRLLNEHMNAHTNSRSFKCETCDKQFHYLSSLQMHSRINSANGKQLSCELCCKQFSQKIRNKWHMSKHEKHSGIDCTKKHEEKPFSSTEIDCNSKDDVFGSSEGAHPVTINLEETTTDAYKKPIQLEKLLIKQRCKIRNDDGTVAFKCDICDKIVKKGSNFLDHYRTHDRDKSPFSCELCEKTFRHPSNLKRHVETIHMQIKKFGCELCDERYTSKVALYRHMLTHPGSRRNNSDKETRKEEATVKKLICDVCNKVFKTVPNLRRHVRTVHMQIKNFACNICERRFCTKVNLDEHMNTHDNSRPLKCDICNQHFNNGSGLRRHMKSHIAHGNKRMYKCGICDKQYLHMPDIKRHVMAVHLKISLTEHTKQLREKQCIQSKDDNYRSSQDTRSTSSSWKETTDSGFKKTSKRLRNKNNPNNCDICNKSFTDQWDLRCHVETIHKQNKKYICDGCYLRFSNRTSLKNHRATCAQVGLDNDNNIHSESDEDNERREREAQISNTCVICNKTLSSLTNLKRHVESVHMQIKKFECHICNKRFSSKCVRDEHLDTHSNKRPLKCDLCDKYFKNKPGLRTHKKVHFNSRTKNTRIYTCNICDKQISNLKRHLQLVHKIAPDNGSTKEQTRNEFGSAEIIENDTNSKESEYGSSQDTQPTSSNRKETTDNEYKETDEAKIRNDDGTVCNICDETLETGSNLVDHYMIHNKMNPYNCDICNTSFTHHSDLKSHVETTHKQDKRYICEGCNIRFRNRKSLKNHMAKCKEGGSDNDNNTYPGSDEDNEESETEAQKTNTCVLCNKSFATMTNLKRHVESVHMHIKKFECDICNKRFFTRFIRDEHMDTHSNNRPLKCDMCDKYFKNRSGLRDHKKIHLNKKRKKKLHTCNICDKQIYNLNQHLAAVHTQIRNFECDFCDKIFLTKFLKDEHMATHNDERPVKCDICDKCFKNRSGLTVHKRRHFPQKRKNKMYRCNICDKQIYNLNRHLAAVHKVTPEKYTTVEQIKNEFDRAGIIENDTNSKESEYGSDDLIIKEELPSDSEDPLQDDTMELSSY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01186684;
90% Identity
iTF_01186684;
80% Identity
iTF_01186684;