Pspi011044.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Philonthus spinipes
Gene Symbol
-
Assembly
GCA_963082785.1
Location
OY720303.1:30331114-30347268[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 41 0.036 5.7 8.9 1.0 1 23 28 50 28 50 0.98
2 41 0.063 9.9 8.1 0.6 1 22 55 76 55 78 0.81
3 41 0.013 2 10.3 5.3 1 23 82 104 82 104 0.94
4 41 0.00024 0.037 15.8 3.0 1 23 113 135 113 135 0.98
5 41 1.6e-05 0.0025 19.5 0.2 1 23 142 164 142 164 0.98
6 41 0.00023 0.036 15.8 4.4 1 23 170 192 170 192 0.98
7 41 3e-06 0.00048 21.7 0.1 1 23 198 220 198 220 0.97
8 41 3.6 5.6e+02 2.6 0.2 3 21 242 260 240 261 0.90
9 41 0.00013 0.021 16.6 4.7 1 23 267 289 267 289 0.96
10 41 0.0012 0.19 13.6 0.4 1 23 300 322 300 322 0.98
11 41 1.2e-05 0.0019 19.8 1.9 3 23 329 349 328 349 0.99
12 41 9.4 1.5e+03 1.3 0.8 1 19 358 376 358 380 0.73
13 41 3.4e-05 0.0053 18.4 0.4 1 23 388 410 388 410 0.98
14 41 8.7e-08 1.4e-05 26.6 1.2 1 23 444 466 444 466 0.97
15 41 1.2e-05 0.0019 19.8 0.1 1 23 472 494 472 494 0.97
16 41 0.085 13 7.7 1.6 3 23 518 538 517 538 0.97
17 41 5e-05 0.0078 17.9 0.1 1 21 542 562 542 563 0.95
18 41 7.7e-06 0.0012 20.5 0.1 2 23 569 590 568 590 0.98
19 41 0.0066 1 11.2 2.8 1 23 596 618 596 618 0.96
20 41 9.2e-08 1.4e-05 26.5 1.1 1 23 624 646 624 646 0.97
21 41 2.5e-05 0.0039 18.8 0.6 1 23 664 686 664 686 0.99
22 41 0.00016 0.025 16.3 0.8 3 23 694 714 693 714 0.99
23 41 2.3e-06 0.00036 22.1 0.6 1 23 720 742 720 742 0.97
24 41 0.34 53 5.8 1.9 1 14 748 761 748 764 0.90
25 41 0.00077 0.12 14.2 0.3 1 23 775 797 775 797 0.99
26 41 0.0001 0.016 16.9 0.6 1 23 830 852 830 852 0.98
27 41 0.00019 0.03 16.1 0.3 2 23 856 877 856 877 0.98
28 41 7.3e-08 1.1e-05 26.8 0.9 1 23 883 905 883 905 0.97
29 41 1.6e-05 0.0026 19.4 0.7 1 23 911 933 911 933 0.98
30 41 1.8e-05 0.0028 19.3 2.0 3 23 1068 1088 1066 1088 0.96
31 41 0.00012 0.019 16.7 2.1 1 23 1093 1115 1093 1115 0.98
32 41 7.1 1.1e+03 1.7 0.1 1 12 1148 1159 1148 1162 0.79
33 41 1.2e-06 0.00019 23.0 0.1 2 23 1175 1196 1174 1196 0.97
34 41 0.00022 0.034 15.9 0.7 1 23 1202 1224 1202 1224 0.97
35 41 1.3e-07 2e-05 26.1 1.4 1 23 1230 1252 1230 1252 0.98
36 41 1.3e-05 0.0021 19.7 0.2 1 23 1263 1285 1263 1285 0.98
37 41 5.8e-05 0.0092 17.7 0.3 3 23 1293 1313 1292 1313 0.99
38 41 1.1e-06 0.00018 23.1 1.6 1 23 1319 1341 1319 1341 0.97
39 41 2.9e-05 0.0045 18.6 1.1 3 23 1349 1369 1347 1369 0.97
40 41 3.6e-07 5.6e-05 24.6 0.7 1 23 1375 1397 1375 1397 0.97
41 41 2.3e-05 0.0036 19.0 6.5 1 23 1403 1425 1403 1425 0.98

Sequence Information

Coding Sequence
ATGAAAGCCAGGCAATATTTCTTCGACAAAAGATTCATAAAACAACATTTGGAACCAAAAGAAGAAAACTGTGGCCGAGCATACACGTGCGGGGTGTGTAACAGAAAGTACTTAACGAAAGCTAGCGCTGATAGGCACATGAAGAAACACAATATTCAAAAATACGAGTGCGAGTCTTGCGGGCAGAAATTCTCCACTAAGACTTTAGAAATGCAGCATAAGAACGAAGTCCACAGTGGTTTGTATCTATGCAAAACATGCGGAAAGACGTTCGCTACAAGACAGACTTGGCATCACCACACCGTGAAGCACGATCCCGATTTCAAACCGGTTGTTTTCAAATGCAATTCTTGCGACTACACCTGCGCTTCCAATTCGAGGctcaagcgccatattttgatTCACAAGGGTGAAAATGTGAATTACGTGTGCGATATATGTGGGAAGCAACTTACGGCGAAATCAAGTTTGAATAGCCATTTGAGGATACACAATAACGAGAAGCcgttttgttgtaaatattgcgGAAAGGCGTTTGTTTCGCATAATGTGTTGAAAGTGCACGAGAGGACGCATACGAATGAAAGGCCGTTTGCTTGTGAAGTTTGTGGGAAAACTTTTACGCAAAGATCGCCGTTGGTTATTCACTTGAGGCTGCACACTGGGGAGAAACCGTATGATTGTCTTGCGTGcgagaaaaaGATCTTCTCTTCAAAAATTATCTGCCGGAAATGTAAGCGACACTACCCCTCTGGAGTAGTCCTCATGAAGCACCTAGAAACCTGCAAAGGAAGACGCTTTCTGTGCACACTGTGCCCAAAAACATTCAAGACCCACTTCCTAGTAAAACGGCACATGAAAACCCACGCTAACCCAACCAACCAAACCAATATAAAGTACTCTTGCCCCAAATGCGGGCTACAACTCGCCACGAAACTCTCACTAAAAGACCACCGAAAAATCCACGAATCAGAAAGCCTGCTTTGCTCCGAATGCGGAAAGGAATTCCAAAACAAATACAAGCTCAAATACCACATGAAAACCCACGACCCCAACCACACAGCACACGTGTACAAATGCAAACTGTGCGATTTTTCTGATATCTCCAGGAGGAAATTCGACCGCCACCGATGGATCCACACGAGCGAAGGCGAGGAATCGTACATCTGCGATGTATGCGGGAAGACGATACGCTCGAAACCCAGTTTTGATAAGCACATGAGGATGCATAACAACATAAAGCCGTATGCTTGTGCAACATGCGGAAAAGCGTTTGTCTGCAAAACGGTGTGCAAAGAGCACGAGAGGACGCACACGAATGAGAAGCCCTTCTTTTGCAAAATATGCGGGAAAGCCTACACGCAAAGGTCTTCCCTGCAGATACACATGAGGTCGCACACCGGGGAAAAACCGTATGCTTGTGAAATTTGCGGGAAGAGGTTCACTTCAAAAGCAGCGCTGGGCGTTCATTCTAAAACTCATGACAGGGGTCCGGGTACAGAAGGTGCCAACACGATGGATAAGAAGAAATCTATTCGaaaCAGCGTCGCGTGTGGTGTATGCTGGAAGAATCTTAGCTGTAAACGCGCATTGAATCGGCACATGCGGCTGCACACCAAGCCCTTCGTTTGTACCGACTGTGGAGCTCGATTCGCGTACAAAGTTTCACTAACGAGACACTTGAAGATCTACCCCAAGGAATCCCAATGTGAAATATGCGGGAAGACGCTCTCCTCGAAGGCTAGCCTAATCGAGCATTTAAGGATTCATACTAAAGAGAGACCACACTGCTGCGACTTTTGCGACGCGACTTTCGCTTCGTTCGGGACGCTCAGATGGCACAGAATGATCCACACCAACGAGCGGCCCTTCGCGTGCAACGAATGCGAGAAGGCGTTCAAGCGAAGGTCGCACTTGGTCGCGCACATGCGGGTGCATGAGATGAAGGTTGAGGAGATTGGGGAAATTGGGGAGAAGACGTTGCCGAAATATGTGTGTGAATCTTGCGGGAAGACGCTTTCTTCGAAGAATAGTTTGGTGGAGCACAGGAGGACTCATACTAATGAAAAACCGCACGGGTGCGACATTTGCGGTTTGAAGTTTGCGTTTCAAACGTCGCTTAAGAGGCATAAAAGGCTTCACGCGAACGTGAAGCCTTTTAGTTGCAACGAGTGCGGTAAAGCTTTTGCGCGAAAAACGGACTTGGCTACTCATTTCAGGCTGCATACGGGGGAAATGCCTTATAGTTGTTTCGTCTGTGAGAAGACATTCAGACACAGGACGTCgaatCACGATGAAAAAGAGAAGATAAACCCAAAGGAATTCCAATGTAAATTATGCGAGGAGACGCTTTCGTCCGAGGAAAAACTAACGGAGCATGTAAGGATTCATATTCAAGAGAAACCTTGCTGCTGCGTCATTTGCGATACGGTTCTCCCTTCACGAAAGTCGCAAATACGGTCGAAGGTGGAGGTTGCGGAGAAGGAATATGTGTGTGAAATTTGCGGGAAGACGCTTACTTCGAAACTTACTTTAAAACAGCACAATAAGATTCACACCGAGGAAAGGTGCGACATCTGCGGACTAACATTTAGGTTTCTAAAGGCGCTCAGGGAGCATGAAAGGGTTCATGCGTATGAGAAGCATTTTAGTTGTAAGGAGTGCGGTAAAGCTTTTTCGCGGAAATCGAACTTGGAGACTCACTTAGAGCAGCATACGGGGGATGTGTTTTATAGTTGTGCCATCTGTGAGGAGACTTTTGCGGATAAAACGTCGCTCAAGAAGCATAAAAGGCTTCATGCCAAGCCTCAAGCGAATGAGAAGCTAACGAAAGATCTTCATACCAATGACGCAAACGAGAACCTTCTTACGAATGAGAAGCTAACGAAAGATCTTCATACCAATGACGCAAACGAGAACCTTCTTACGAATGAGAAGCTTCATGCTAACGAGAAGCTTCACGCGAACGAAGACCTTCATACGAATATGAAGTTTCACGCGAACGAGGATCTTTATACAAAGGAGAAGCTTCACGCGAAGAAGAATCTTCATACGAACGAGAAGCTTCACGCGAAGGAGAATCTTCATACGAACGAGAAGCTTCATTCGAATGAGAAGCTTCATGTTAACGAGAAGCTTCGCGCGAAAAAGAAGCTTCATGCCaacaaaaagcaaaaaaacaaaaaagggaAGCATATTAATTGCAAAAAGTGCGGTAAAGTTTTTCGTAGAAAATTGAGCTTGGCTAATCACTTTAGGCGGCATAGGGGGAAGCCTTATAATTGTCCCACCTGTAAGAAGACATTCGCATACAGGACACCCTTCATAAAACACATGAAGCAACATACCGAGgcgaagcTCGAAGAAAATTCCAGTATCACGTGCGGTCCATGCGGGAAGAAATTGATATTGAATCAAAACATTCGGCTGCACACTGAACCTTTCGTTTGTAGCGACTGTGGAGCTCCAATCACGCACAAAGTTTCGTCAAAGAGACAAAGGAAGAGAAAACCTAAGAAATCCCCATGTGAAATATGCGGGAAGACCCTTTCCTCGAAGGCTAACCTAATTGAGCACATGAGGGTTCATACTAAAGAGAAACCTCACGTCTGCGACATTTGCCAAGCGGCTTTCTCCTCATTCGGGACGCTCAAACGGCATAGACTGGTCCACACCAGCGAGCGGCCTTTCGTGTGCAACGAATGCGAGAAAGCTTTCAAGCGAAGGTCGCATTTGGACGCGCATATGCGGGTGCATGGGTTGAAGGAGGATATTGGGGAGAAGAAATTTGTGTGTGAATTATGCGGGAAAATACTTTCTTCGAAAAATACTTTGATGGAACACATGAGGATTCACACTAATGAAAGACCTCACGGGTGCGACATTTGCGGATTAACGTTTACGTTTCAGACGGCGCTCAAGAGGCATGAAAAGGTCCACGCGAACGAGAAGCCTTTTAATTGTAGCGAGTGCGGTAAAGCTTTTACGCGGAAATCGAACTTGGATACTCATTTCAGGCTGCATACTGGGGAAATGCCGTATGGTTGTTTCATCTGTGAGAAGTCGTTTGCGGATCAGACGTCGCTCAAGAGGCATAAAAGACTCCACGCGAATGAGAGGCCCTTCAGTTGCGATGAGTGCGGTAAAGCTTTTACGCGAAAATCGGACTTGGCTACTCACTTCAGATTGCACACGGGGGAAATGCCTTACAGATGTTCCATCTGCGAGAAGACATTCAGACACAGGACGTCGTTCAAGAACCACATGAAGCAACATACTGAAgagttatag
Protein Sequence
MKARQYFFDKRFIKQHLEPKEENCGRAYTCGVCNRKYLTKASADRHMKKHNIQKYECESCGQKFSTKTLEMQHKNEVHSGLYLCKTCGKTFATRQTWHHHTVKHDPDFKPVVFKCNSCDYTCASNSRLKRHILIHKGENVNYVCDICGKQLTAKSSLNSHLRIHNNEKPFCCKYCGKAFVSHNVLKVHERTHTNERPFACEVCGKTFTQRSPLVIHLRLHTGEKPYDCLACEKKIFSSKIICRKCKRHYPSGVVLMKHLETCKGRRFLCTLCPKTFKTHFLVKRHMKTHANPTNQTNIKYSCPKCGLQLATKLSLKDHRKIHESESLLCSECGKEFQNKYKLKYHMKTHDPNHTAHVYKCKLCDFSDISRRKFDRHRWIHTSEGEESYICDVCGKTIRSKPSFDKHMRMHNNIKPYACATCGKAFVCKTVCKEHERTHTNEKPFFCKICGKAYTQRSSLQIHMRSHTGEKPYACEICGKRFTSKAALGVHSKTHDRGPGTEGANTMDKKKSIRNSVACGVCWKNLSCKRALNRHMRLHTKPFVCTDCGARFAYKVSLTRHLKIYPKESQCEICGKTLSSKASLIEHLRIHTKERPHCCDFCDATFASFGTLRWHRMIHTNERPFACNECEKAFKRRSHLVAHMRVHEMKVEEIGEIGEKTLPKYVCESCGKTLSSKNSLVEHRRTHTNEKPHGCDICGLKFAFQTSLKRHKRLHANVKPFSCNECGKAFARKTDLATHFRLHTGEMPYSCFVCEKTFRHRTSNHDEKEKINPKEFQCKLCEETLSSEEKLTEHVRIHIQEKPCCCVICDTVLPSRKSQIRSKVEVAEKEYVCEICGKTLTSKLTLKQHNKIHTEERCDICGLTFRFLKALREHERVHAYEKHFSCKECGKAFSRKSNLETHLEQHTGDVFYSCAICEETFADKTSLKKHKRLHAKPQANEKLTKDLHTNDANENLLTNEKLTKDLHTNDANENLLTNEKLHANEKLHANEDLHTNMKFHANEDLYTKEKLHAKKNLHTNEKLHAKENLHTNEKLHSNEKLHVNEKLRAKKKLHANKKQKNKKGKHINCKKCGKVFRRKLSLANHFRRHRGKPYNCPTCKKTFAYRTPFIKHMKQHTEAKLEENSSITCGPCGKKLILNQNIRLHTEPFVCSDCGAPITHKVSSKRQRKRKPKKSPCEICGKTLSSKANLIEHMRVHTKEKPHVCDICQAAFSSFGTLKRHRLVHTSERPFVCNECEKAFKRRSHLDAHMRVHGLKEDIGEKKFVCELCGKILSSKNTLMEHMRIHTNERPHGCDICGLTFTFQTALKRHEKVHANEKPFNCSECGKAFTRKSNLDTHFRLHTGEMPYGCFICEKSFADQTSLKRHKRLHANERPFSCDECGKAFTRKSDLATHFRLHTGEMPYRCSICEKTFRHRTSFKNHMKQHTEEL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-