Pspi036761.1
Basic Information
- Insect
- Philonthus spinipes
- Gene Symbol
- -
- Assembly
- GCA_963082785.1
- Location
- OY720318.1:6529936-6532397[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.8e-08 0.00012 23.1 0.0 3 40 20 57 18 61 0.93 2 2 7.1 8.4e+03 -2.1 0.1 1 10 82 91 82 94 0.88
Sequence Information
- Coding Sequence
- ATGGTGCGAAACTATATAAGGAAAACTCAGAAGGGTGCTGGACTAGCTTACTCATCTGAAGACCTTGAAAAGGctgtaaatgatataaaaaatgggAACAAAACTACCCGTGGAGCAGCAATGTTTTACAACATTCCTAGGAGTACTGTTCAACATTATGTTTCTGGAACTCGGGGGAAAGGACACATATCTCAAGGCCCAAGTGGTGGTGGTGGGGGTGTGACTCCTTACCTGTCTGCTGCTGATGAAGAGGAGCTTGCCAATGCAATCAAAGTTATGGAAAAAAATGGGTTTGGCCTAACTGGCAAAGAGGGAAGCCAGGCCAAATATACAATTGCGATGAGACTTCCTTCTGTCACGATCCCTCCAAAACCAGAGTTGTGGGCGCTGTTAATCAGAAGAGTCAACGCAAAACAAGCACCTCTGGAAGAGAAAACACAACAACATTGCTTTGTGTTTCTGCTGATGCCTTTAGATGTGTCGGTATTTAAGGGCCTAAAACAGAAACGGGACAAAGAGCTGTGTAAGTGGCAAAGGCAGGATCCACAGAGAAATATAGAGGCTGTAACGTCAACAGAAGAGCACAAGCAACCACTGATAATCGAGCTGCCGCGTACAGCTAATCCCGAGGTGCCACTGACAGAGGAGCCTAAGCTGTCTTTGACGGCTGAACATGACCAGCCATTAGCAGAAAACACTGAGCACCTGATGGAAGTCCATGGAGTAGAACAACTCCCAACACCTGAGCTTGAACAGCCATCAACATCAAAGCGACAGACTTTTGAAGAACTTTTACTGGacctttACCCAGTTACCCCAGAAAATTGTGGCAGTGCTCTAATGAGATATGGCATGGGGTGA
- Protein Sequence
- MVRNYIRKTQKGAGLAYSSEDLEKAVNDIKNGNKTTRGAAMFYNIPRSTVQHYVSGTRGKGHISQGPSGGGGGVTPYLSAADEEELANAIKVMEKNGFGLTGKEGSQAKYTIAMRLPSVTIPPKPELWALLIRRVNAKQAPLEEKTQQHCFVFLLMPLDVSVFKGLKQKRDKELCKWQRQDPQRNIEAVTSTEEHKQPLIIELPRTANPEVPLTEEPKLSLTAEHDQPLAENTEHLMEVHGVEQLPTPELEQPSTSKRQTFEELLLDLYPVTPENCGSALMRYGMG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -