Pspi039720.1
Basic Information
- Insect
- Philonthus spinipes
- Gene Symbol
- -
- Assembly
- GCA_963082785.1
- Location
- OY720320.1:14182674-14183297[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.4 1.1e+04 -2.5 0.0 29 38 48 57 48 59 0.85 2 2 2.4e-17 2.8e-14 53.8 0.0 2 45 64 108 63 108 0.95
Sequence Information
- Coding Sequence
- ATGCAATACACAACCACGGCCACTGCCCCTCCTACCCCCATCTCACAAACCACCTATCCCACCAACATCTGTAATAATAACGTGGAGGGAAACACAAATCCAAACACGAGGCAAGTGCAAGTGGTCTCCAGCCCGCCACCACCTACCCAAGTACTGCAGAAGAGGAAAAGGAGTGTCAACCCGCAGGCGGATGAAAACTTCGTGAGAGCTCTAGAAGCGGTGCGTTATGGCGGCATTGGTTTTTGCAAAGCAGCGAGAATGTATGGGGTTAACAACCGCACTCTTTGGCTGGAGTATAAAAAACGAGGTTACCCCATCAGCCGTCTAAGTATCAAAAATAGGAAGCTGGAAAACAGCAACAACCCCATGCAAACTCAGGAGAGCATCGAAAGTCCACCTCCTGCGGAAAACCGCGAGGAACAACaccagcagcagcagcaacaacaacaacaacagcaacaacaaattaataataatccagTAGCGATGATTAGCGGTACTTTTATCGACGGTCGGCCGATCGAAATCGCCGCCCCCGTCTTGCAACGCTCGCGGTATTTCGATAACAACCTACTTCACACAACACCGATTAATCTGCAAGGGATTAATTTCGATCAAATGTGA
- Protein Sequence
- MQYTTTATAPPTPISQTTYPTNICNNNVEGNTNPNTRQVQVVSSPPPPTQVLQKRKRSVNPQADENFVRALEAVRYGGIGFCKAARMYGVNNRTLWLEYKKRGYPISRLSIKNRKLENSNNPMQTQESIESPPPAENREEQHQQQQQQQQQQQQQINNNPVAMISGTFIDGRPIEIAAPVLQRSRYFDNNLLHTTPINLQGINFDQM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -