Basic Information

Gene Symbol
Arid4b
Assembly
GCA_963082785.1
Location
OY720308.1:4319295-4332441[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.9e-28 1.1e-24 88.0 0.7 1 89 295 380 295 380 0.95

Sequence Information

Coding Sequence
ATGCAAGGCGACGACCCCCCGTACCTCTCCGTGGGAACAGCCGTCAGCGCCAAGTACAAGGGGGCCTTCTGCGAGGCGAAAGTCAGCAAAGTCGTCCGTATTGTAAAATGCAAGgTTACGTACAAAATGGGATTGGGCAATGCCACAGTGAATGATGAACAAGTAAAAGGACCTTTGAGGGTGGGACAGCTCGTACAGGCCAAGCATCCGGATAGGAAAGAGTTCATCGATGCTACAATCACCAAAATTCAGGACTGCAGCCAGTACACAGTTGTGTTTGATGACGGTGATATAACCACTTTAAGAAGGACAGCTTTGTGTCTGAAAAGCGGCAGACATTTTAACGAGAGTGAGACTCTTGATCAGTTACCGTTGACACACCCAGAACATTTCGGGAATCCAGTAATGGGTGGAAGGCGGGGTAGAAGGAGTAGACAGTTGAAGGAGGATAGCAGTGAAGGCGAAGTCGAAGAAGAGAACGAGCCCGATCTGGAACTGTACAGCGCTGACACCGGAAAGGTGGTGAGTGTTGAAGCAAGCGACAAAAAGAGGAGCAAAGACAATTGGTTTCCTGGCCTGATCGTGATGCCGTCTGCGCAGCCGACCGTCAGGATTAACGTCAAAGACGAGTTCCTCGTCAGATCGTTCAAGGATGGAAGATATTACACAGTGCCAAAGAAGGAGGTAAACGAGTTCAAAAGAGAGATGGGTGCGAAAGTGGAGAGCTCGACTCTCTCAGAAGCTGTGGATAAAGCTATAAAGTTTCTCGATAATGACGAGCTTCCTGTGCACTGGGAAAGGAATTCACTCTTCAATGTGCAATCACAGTATTCTGATTCAGATGAGAATTTTTCAGATAGTTCCGATGATGAACCTACGGAAGAAAAGGACCATTTCGTTGCCCAACTGTACAAATTCATGGACGACAGCGGAACGCCACTCAACAAAACGCCGATGATCAGCAACAAGGACGTCGACTTCTACCGGCTGTTCCGTTTGGTCCACAAACTCGGCGGCTACAACCGCGTCACGAATCAAAACAAGTGGAAAACGATCGCGATCCGTTTGAAATTCTCGCAATCGCAGAACACTTACAATCAAGTGAAGCAGGTTTACAAAAAATGCTTGCTGAGTTACGAATCGTTCTACCGGACTCTGGGGTGCACGATGTTGAACCACACGCGGAACTCGAAGAAAAACCGCGGGCGGAATTTGATCAGGGATAAGGATCGAGTGACGCCGGTGCAAAGTCCCCGGCCGGAGAGGGACGAGGAGGAGGTCAAGAAGGAAGAGGAGAAAGAGAAGGAGAAGGAAAAAGAGAAGGATATCAaagataagaagaaaaaatcctCCGAGGAGGACAAGAAAGAGAGCGGGGAGAGCAGTAGCGAGTTGACCGATAATTCTTCCGAGCAGCAGCCTAGCACGAGCAAGGAAACTGTTAAGCCGAAGAAAGTGGTCGAAGTTAAAGTGAAAGAGAAGAAAAGGACTTCATCTGTGACTGAAAAGGTTAAAGTTGACGATACTAAGAAGGAGAAAGAGAAGGAAAAGGAGGAGGAGAAAGAAAAGGAGAAGGATAAATCTTCTGTGCAGCAAACGAGGTCCAAAACGAATATCTCGAAAAGTAAAGAGGTTGTATCTCCAGAAAGTGCGGTCAGTAGGAGTAAAACTCCGGTCAAGGAGACGCAAGCCAAAGTGCCGGCTAAGCCTGTTCCTAAAAAAATTGTCGAGGATGAGAAggataaagataaaaaaagagGGAGAAAGAGGCTTAATGTTGATGATAAAACTTCTAACTCTGACAGCAGTGTGAATGAATCATCAACGCCCACACCGTCTTCATCCACAATTCAATCATCACAAAATCAAGTCAACATCGGTGACAAACTCAAAGTCTACTACGGTCCGACGCACGAGTCCAAAGTGACCTACGAGGCGAAGGTCATCGATGTCGACAATGAACCGCATCCAAACACTGCCTATTTAGTGCATTACACAGGATGGAACACCAGATATGACGAGTGGATAACGCTCGGCAGGATTGCAGAGAATCTCAGTGCGACGACCAAAGCGAAACGTCTGAAACAAGGTAATTCGGGGTCGAAGGGCAACAAAGTTATCCCCGGAAAAAGAGGCAGGGGAATGTCGATTACGGGTAGGAGCACAATTCCCGAGGTTCCGAGATCTTCGACCCCCTCCAGCGTGACATCATCGTCGAGTCGGACGAAAAGTCCAGCTACGCCTGCTTCAAGAAGTGGGAATCGATCAACTAGACAAGGGGATGCAACTAATCGCCGAACCAGGAGGACTTCAGCTCAAACGGACATATCAATCCATTCTGAATCAGAATCCGACGAACAGTCTGAGAGTGACACAGAGCTAACAAGGACAAGGAGTGGGAGCAAAACTGATGATGTTGAGCCGAAAACTTATAGAAGGAAATTGGTGAAAACGAAGGGCGACAAGCGCAAAGACGACGAGGACACCGAGAAAGAAGAGGACGTCGAACGCCCGAAAAGGGCGCGCAAGCTCAAGAAACCCTCAGACGTCGCCCCGCTGGAGGACAGCGATGACGACAGCTCGAGCCAACCGAAGGGCAGAGAATTCGACCTGAATCAAATCCGTTCAGAATTAAAAGGCTTCGGAAAGGCGATCAAAGTCCCGAGCACTGAGTCCAGCGAAAAAGAGAACGCTTCATCAGATTCCGAATCGACGGTCGTCGACCTGAAAGAGTGCCCCGAGATTGAAGCCGAAGATAAGAAGGAGAAGGAAAAAGAGAAGGAAGATAAGTGCTCGAGCTCGGAGGATATATACGAGTTCAAGGAACCCGAGCCTTTCGAGTTCGAAGCGAGGAAAAGCGACGGGGACAAGGGGAAGAAACGTATTCCGAGGTTGTTTGAGGATTTAGAGAAAACACCCCCGAAGAAACAAAGCCCGAATCAGGAAGTGAAGAAATTTAcagctaaaaaaatattgatgaaaaagGAGGAGGAAATTTCATCGCCGGAGATCAAGGAGGAAAAATCTCTGGAGGATCCTTTCGATATGCTAGTTGAGTCTCCATCTTTCCACATAGGAAAATCGACTACGATTACTAAAGAAACCGTGGTGGAAAAACCTGTGATGAAAATGCACATGTTTGAACTTCAGGAAGAGGATAGTGAAGATCGAATGGGTTTGTCTTCGGATAATGATGATTTCACGCGAAATTCCTCACCGTTTTTATCATCGAATTCACCGGATCGAAGTGAAACGAAAATGGAGGTTAAAACGAGTAAAGACAGTGAGGATGATGTGGATAGAATACGGGCTTCAATTCAGCGTGTTATCGAACAAAGTTCCTTGAATGATGAAGATAGTGAGGATTTGCTGGAGCAGCCTTCAACAGCTCAATTTGAAGTGAAGGCTTCACCGGAACCGAAAACGAGTATTTCCGTTTTGGTTAATCGAATGGAGAGTGAGGATGGTTTTAAAGAAGAAGTCATAGAGGAGAAAGAGAAGGAAAAAGAGAAAGTGGTGGTTTTACCCAAGCAGATTGCTTCGGTTTTTCAAGAAACGGATAGTAGTTTTTTGGAAGATTTATGTTCGGCCCCACCGCAATTTAATACAGCTAAAGTTGATGATATTAAAGAAATCTCGTTGAAGACTGGAACTAGGATAGCGGATACGTTATTACAAAAATTCAGCATGATTAAGAGCATTGAAAAAAGTCCTGAACCAGAAGTAAAGGAAGAGGAGCCGGTTGAGGTAAAACAAGAGGAAAAACCTGAGGTAAAAGAAGAACCCGCCATAACGACTCCAATGatgagtttaattaaaaacatcacaACGAGCACTGTTAACGTAATGAAACCCGAGGAGGAATTGAAGACGATCGAAGCGAACCAAACCGAAACTAAACCGAAGCTCGAGGTGAAAAAACCCGAATCCCCACTGGATTTCAAAAAAAGGCAAGCTTCGAAAAAATTCGTCAGCCGGGAATTCATCGAAGACACCGACACGGAAAGCGATTCGGATTCCGAACAGCGCTTGGTAATCGCTCGATCCGACGATGACTCCCAGACCAGCATCTCGCTAGACAATAACAAAACCGAAGATGTTAAAGAAAGCGACAGCAATATCACACTTTACCCGCACACTGAAGACTCGCAGTCCCAGGAAGAAGAGCGGAATTTTAAATTCGATAATCTACCGGTTAAAATCGAAGAAGTCGAGGAGGTTAAAAAGGAAGAGGAGATTACGGGTGATGATTTGAAGTGTGAGGAAACGGAGATTAAGGAGGAGGAGCCTGATTCGCAGTTGCATTCGATGTTGTTGTGCAGGGAGACGATTCCTGGGAGTCCGGCGCCGCCGCCGCAGAACGATACAGCGCAAACGACGAAGCCAGCGAAACCTAAAAACGTGCTCGAAATGCCGTTTGCGAGCGCTCCCAGCAGTagtagcaataataaaaataattcaatgttaCAACAGGAGAAAATCAAGGAGAAACAGCCATCACCACCGCCGTTGGTCATCCCGTTGGACAACAGTAAAGACGCTTCAACCGTGTTGGACAATACACCGCCCACAACACCCGAGAGTACTATAAGTAATTTATCGCCGAGAGGGGATGTCGGAGGCTTATCACCGAACATTGCGGATAATGAGAGTTGTAAATCGGCGGATGCCGATGTTGATTATCCGCCTTCGAATATGAGGAGGTCAATTTGCAGCAAAATAGGGAATTATAGTGATgattcgTTGACCAATAATGATCCACCAATGATGAATCAGAAAAGGCCAAGGGAAGAAATCCCCTCCCCTTGTAAGAAACGGAGAAGGTCGTGTAAAGGAGACAGTGATGTCCCGACGAAAAGAGGTAGAAAACCAAACCGATCTCGGCACAACAGTGACAGTGATGACACTTCTGAACACTCCATGCAAGGTATTAATCTGGAGACAAGACTCACTCGATCTTCGCCCAGGCCATCAAAGTACAACTTCTTCGTTGAATTGgATCCTAGTTTAGACAGCGCTGCGAGGATAGCGGTCCTGCAGCAGAAACTGCAGGACCTGCGCAAGACCTACGCCGACGTGAAGGCCGAGCTGGTGACGATAGAGAGGCGGCGGAAGAAGATCCGGCGGAGGGAACGCGAAGCACTAAAGGCGGCAAAACAGGAGATGGCTTGCACATGA
Protein Sequence
MQGDDPPYLSVGTAVSAKYKGAFCEAKVSKVVRIVKCKVTYKMGLGNATVNDEQVKGPLRVGQLVQAKHPDRKEFIDATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFNESETLDQLPLTHPEHFGNPVMGGRRGRRSRQLKEDSSEGEVEEENEPDLELYSADTGKVVSVEASDKKRSKDNWFPGLIVMPSAQPTVRINVKDEFLVRSFKDGRYYTVPKKEVNEFKREMGAKVESSTLSEAVDKAIKFLDNDELPVHWERNSLFNVQSQYSDSDENFSDSSDDEPTEEKDHFVAQLYKFMDDSGTPLNKTPMISNKDVDFYRLFRLVHKLGGYNRVTNQNKWKTIAIRLKFSQSQNTYNQVKQVYKKCLLSYESFYRTLGCTMLNHTRNSKKNRGRNLIRDKDRVTPVQSPRPERDEEEVKKEEEKEKEKEKEKDIKDKKKKSSEEDKKESGESSSELTDNSSEQQPSTSKETVKPKKVVEVKVKEKKRTSSVTEKVKVDDTKKEKEKEKEEEKEKEKDKSSVQQTRSKTNISKSKEVVSPESAVSRSKTPVKETQAKVPAKPVPKKIVEDEKDKDKKRGRKRLNVDDKTSNSDSSVNESSTPTPSSSTIQSSQNQVNIGDKLKVYYGPTHESKVTYEAKVIDVDNEPHPNTAYLVHYTGWNTRYDEWITLGRIAENLSATTKAKRLKQGNSGSKGNKVIPGKRGRGMSITGRSTIPEVPRSSTPSSVTSSSSRTKSPATPASRSGNRSTRQGDATNRRTRRTSAQTDISIHSESESDEQSESDTELTRTRSGSKTDDVEPKTYRRKLVKTKGDKRKDDEDTEKEEDVERPKRARKLKKPSDVAPLEDSDDDSSSQPKGREFDLNQIRSELKGFGKAIKVPSTESSEKENASSDSESTVVDLKECPEIEAEDKKEKEKEKEDKCSSSEDIYEFKEPEPFEFEARKSDGDKGKKRIPRLFEDLEKTPPKKQSPNQEVKKFTAKKILMKKEEEISSPEIKEEKSLEDPFDMLVESPSFHIGKSTTITKETVVEKPVMKMHMFELQEEDSEDRMGLSSDNDDFTRNSSPFLSSNSPDRSETKMEVKTSKDSEDDVDRIRASIQRVIEQSSLNDEDSEDLLEQPSTAQFEVKASPEPKTSISVLVNRMESEDGFKEEVIEEKEKEKEKVVVLPKQIASVFQETDSSFLEDLCSAPPQFNTAKVDDIKEISLKTGTRIADTLLQKFSMIKSIEKSPEPEVKEEEPVEVKQEEKPEVKEEPAITTPMMSLIKNITTSTVNVMKPEEELKTIEANQTETKPKLEVKKPESPLDFKKRQASKKFVSREFIEDTDTESDSDSEQRLVIARSDDDSQTSISLDNNKTEDVKESDSNITLYPHTEDSQSQEEERNFKFDNLPVKIEEVEEVKKEEEITGDDLKCEETEIKEEEPDSQLHSMLLCRETIPGSPAPPPQNDTAQTTKPAKPKNVLEMPFASAPSSSSNNKNNSMLQQEKIKEKQPSPPPLVIPLDNSKDASTVLDNTPPTTPESTISNLSPRGDVGGLSPNIADNESCKSADADVDYPPSNMRRSICSKIGNYSDDSLTNNDPPMMNQKRPREEIPSPCKKRRRSCKGDSDVPTKRGRKPNRSRHNSDSDDTSEHSMQGINLETRLTRSSPRPSKYNFFVELDPSLDSAARIAVLQQKLQDLRKTYADVKAELVTIERRRKKIRRREREALKAAKQEMACT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-