Pcog055835.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Philonthus cognatus
Gene Symbol
nfxl1
Assembly
GCA_932526485.1
Location
CAKOBG010000314.1:980155-984198[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 2 9.4e+04 -5.0 1.9 15 19 161 165 161 165 0.85
2 17 0.15 7e+03 -0.5 0.8 4 10 196 202 195 202 0.95
3 17 1.1e-07 0.0052 19.1 17.0 1 19 210 227 210 227 0.99
4 17 6.9e-06 0.33 13.3 19.5 1 19 263 281 263 281 0.99
5 17 1.4 6.4e+04 -3.6 1.0 6 10 306 310 305 310 0.88
6 17 6.3e-05 3 10.3 6.3 1 18 316 334 316 335 0.90
7 17 3e-08 0.0014 20.9 9.6 1 18 370 387 370 388 0.98
8 17 0.54 2.5e+04 -2.3 0.4 1 4 397 400 397 401 0.89
9 17 5.5e-05 2.6 10.5 17.1 1 18 422 439 422 440 0.94
10 17 1.4e-06 0.067 15.5 13.8 3 18 451 466 443 467 0.85
11 17 0.0016 76 5.8 5.6 10 19 516 525 513 525 0.90
12 17 0.0021 98 5.4 5.4 1 12 535 545 535 545 0.96
13 17 2 9.4e+04 -6.9 4.5 14 18 573 577 573 577 0.86
14 17 1.2e-05 0.58 12.5 4.7 1 11 614 624 614 629 0.93
15 17 2 9.4e+04 -6.7 3.3 6 8 642 644 639 646 0.50
16 17 1e-05 0.48 12.8 19.5 3 18 655 670 654 671 0.91
17 17 0.00083 39 6.7 16.5 1 17 714 732 714 734 0.86

Sequence Information

Coding Sequence
ATGAGTGGAAGTGGGAGGAACGCGAAGAACCCTTGGGGGCCGCAGGTTAACAAAAAGGCGAAAGGGTCCCCTGTATTCAACAAGAATGCCGAACAGAAGTTCAAGGAGGCGCAGAGCAAGCTGCAGGAGGCCGTGCAAAAACACATCAAGGAGTACGAGTCGTCCTCCGATGAAGAAGAGCTGGAAACAGAGAGTGTCATCAGGACGATTTTGAGCAAGTATGAAACGGCCGGAATCAAGGATGATGCCGTTGTCGGGAGGACAAAGGGATTACTGGAAGAGGTTTTAATGTCGGGGTCTTCGACTTGCCTTATTTGTATTTCTTCGATAAAAAGGAATGATTCTATTTGGTCATGCACAAAATGCTACTGTTTCTTTCACTTGATGTGCATACAACGTTGGTCGAAAGACACGATAATGCAAATGAAGGCAGCCCTAGAGGAGCAGATCCTAGCCCGTAAAATCACGATGAAATGGGGCTGTCCGAAATGCCGGAACGAGTACGACCCAGAAGACATACCCTCCGAGTATTTATGTTTCTGCGGCAAGTCTAAAAACCCCCAGTTTCAACCCTTGCTAGCCCCACATTCTTGTGGAGAAACCTGTGGGAAGTTATTAGTCCCGAAATGCGGGCACGAGTGTCTCTTACTTTGCCACCCGGGGCCGTGTCCTCCTTGTCCGAAAACCGTGTCGGTCAGTTGTTATTGCAGTGGTTCGCCCCGAAAAGTACAGAGGTGCAGTAATAAGGAATGGTCTTGCGGTGCTGTTTGTAACAAAGTATTGGCTTGCGGGAAGCATAAATGTTCGGAGGGTTGTCATCCGGGGCATTGTAAAGCTTGTCCGAAGAAGAGTATGCAGAGGTGTTTGTGCGGAGCAGGGGTCAAGATGAGGGATTGCTCTACACCAATTTGGCAATGCGATAAGGTTTGTGGAAAAGCACTCTCTTGTGGTTTTCACAATTGCGATGAAATTTGCCATATAGTGGCCGAATGCGGGGATTGTTTGTTGTCAAAATTGCGGACGTGCCCTTGCGGGAAGTCTAGTTATCAGTTGCCCTGCACGGAAGACACACCCACTTGCGGAGACACCTGCGGGAAAGTCTTGGAATGTGGGATGCACGTTTGCAACGAAAGATGCCACAAAGGAAAATGCATGTCTTGTGTGGAAACAGTTGTTAAATCCTGTAGATGTGGGATGCATCAAAAGGAAATCCAGTGTAAGAAACAATATCTTTGCGAAAGTAAATGCAAACAAATGAAGGATTGCAATAAACATCCTTGTAATAGAAAATGCTGTGATGGAAATTGCCCTCCATGCGAGAAACCCTGTGGGCGTACTTTGAATTGTAAAAAACACCCATGTGCATCCGTTTGTCATCGTGGGCCTTGTTACCCATGCAATTTAAGTGAGACTGTCTCGTGCAGATGTGAAGCTACCTCAATAACAGTGCCTTGTGGGAAAAAGAGCCGTACTAAACCACCAAAATGTTTGAAATTTTGCACGATGCCTCCAGAGTGTCACCATAAATCAAGAGAACCCCACCGTTGTCATTTTGGGGATTGCCCCAATTGCAGGCAATACTGTAACAAGCCGAGACCAAACTGCGGGCACTTGTGCCCAGCGCCTTGTCACTCTTCGGTGCTCGTTAAAATCGAGGGGCAAAAAGCGAGCACTCCGTGGGAGGAAAAGGGGCCTCTGTTGACAAAAAAGTCCCTGCCCTGTCCTGATTGTGTTGTTCCGATACCAGTCACTTGCTTAGGTGAACATGAAACTTGTGATTATCCTTGCTATTTAGCAAAACCATCGAGTTGTCACAGGAATTGTGGCAGATTGCTTAAATGTGGTAATCATAGCTGCACTAGAGCTTGTCATATAATCGAAGGACAGGAAAATCCTTCGTTGGCAGGAACTAGTTGTGAAAGTTGCGAGTCGGAATGTAAAAAGGAACGTCCGAAGAATTGTACGCACCAGTGCCCGAAGCCCTGCCATCCGGGACAGTGCCCGCCCTGTAATCAAATGATCCGGATCAAATGCCATTGCGGACTGAACCAACCTTACATTCCATGCAAGTACTGGACCGGATCTGTCGATTTAGAGGCCTTGCAGAGTTGCGGCAATCAATGTCCCAAAAACTATCCTTGTGGTCATCGGTGTTGTGCAAACTGCCATTCGGGCGAATGCCCGAACACCGAACAGTGCAAGAAGAAAATTAAAGTAACCTGCCCATGCAAACGAATCAAAAAGGAATTCTCCTGTCAAACGAACCGCAAAGGTTTGGCCGTGATTAACTGCGATGAAGAGTGCATCAAAAAACTGGAACAGGAGAAGAAACTTACGGAAAAAATAAATGCAGAGAGGAAGAAAGAGGAGGAGCTGAGGAACCAGAGAGAGCTGGAGAAGTTCGAGAAGATGTTCAATGGGAAGAAGAAGAGTAGGGATAAGAAGGTTGTTGAGGAAACAAACGAAAAAGGTTTTCTGCAGAAGTACTGGATTTTATTAAGTGGTGTTGTCGTCGTTTTGTTTTCAATTGGGTTAATATTTGTTAAGTGA
Protein Sequence
MSGSGRNAKNPWGPQVNKKAKGSPVFNKNAEQKFKEAQSKLQEAVQKHIKEYESSSDEEELETESVIRTILSKYETAGIKDDAVVGRTKGLLEEVLMSGSSTCLICISSIKRNDSIWSCTKCYCFFHLMCIQRWSKDTIMQMKAALEEQILARKITMKWGCPKCRNEYDPEDIPSEYLCFCGKSKNPQFQPLLAPHSCGETCGKLLVPKCGHECLLLCHPGPCPPCPKTVSVSCYCSGSPRKVQRCSNKEWSCGAVCNKVLACGKHKCSEGCHPGHCKACPKKSMQRCLCGAGVKMRDCSTPIWQCDKVCGKALSCGFHNCDEICHIVAECGDCLLSKLRTCPCGKSSYQLPCTEDTPTCGDTCGKVLECGMHVCNERCHKGKCMSCVETVVKSCRCGMHQKEIQCKKQYLCESKCKQMKDCNKHPCNRKCCDGNCPPCEKPCGRTLNCKKHPCASVCHRGPCYPCNLSETVSCRCEATSITVPCGKKSRTKPPKCLKFCTMPPECHHKSREPHRCHFGDCPNCRQYCNKPRPNCGHLCPAPCHSSVLVKIEGQKASTPWEEKGPLLTKKSLPCPDCVVPIPVTCLGEHETCDYPCYLAKPSSCHRNCGRLLKCGNHSCTRACHIIEGQENPSLAGTSCESCESECKKERPKNCTHQCPKPCHPGQCPPCNQMIRIKCHCGLNQPYIPCKYWTGSVDLEALQSCGNQCPKNYPCGHRCCANCHSGECPNTEQCKKKIKVTCPCKRIKKEFSCQTNRKGLAVINCDEECIKKLEQEKKLTEKINAERKKEEELRNQRELEKFEKMFNGKKKSRDKKVVEETNEKGFLQKYWILLSGVVVVLFSIGLIFVK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01186702;
90% Identity
-
80% Identity
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