Pcog020213.1
Basic Information
- Insect
- Philonthus cognatus
- Gene Symbol
- Sall1
- Assembly
- GCA_932526485.1
- Location
- CAKOBG010000096.1:1628167-1639050[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 8.6 1.8e+03 2.0 0.1 2 23 8 29 7 29 0.92 2 13 0.0013 0.26 14.1 0.1 1 23 1702 1724 1702 1724 0.99 3 13 0.00015 0.032 17.0 1.8 2 23 1727 1748 1726 1748 0.96 4 13 0.016 3.3 10.6 2.0 1 23 1754 1776 1754 1776 0.98 5 13 2.7e-05 0.0056 19.3 4.1 2 23 1783 1804 1782 1805 0.95 6 13 0.078 16 8.4 0.4 6 23 1819 1836 1818 1836 0.99 7 13 0.001 0.21 14.4 0.7 3 23 1843 1864 1842 1864 0.97 8 13 0.023 4.7 10.1 0.1 2 23 1880 1900 1879 1900 0.97 9 13 0.00038 0.08 15.7 1.1 1 20 1906 1925 1906 1928 0.91 10 13 0.00098 0.2 14.4 0.1 1 23 1936 1958 1936 1958 0.98 11 13 0.0095 2 11.3 4.9 1 23 1964 1986 1964 1986 0.98 12 13 1.6e-05 0.0033 20.0 3.6 1 23 1992 2014 1992 2014 0.96 13 13 0.0025 0.52 13.1 5.3 1 23 2020 2042 2020 2043 0.95
Sequence Information
- Coding Sequence
- ATGGAATCGACGGGAAACACGGTGTGCCCCGTGTGCACGCTCTACCTCAGGCCGGGCATAACGCTGCAATCCCACCTTGAAACCCACCCCAAGGACAAGGTGATCGAGGCGCTGGTGAGGCAACAGTATGTTCTACCCGCAGTCTTCAACGCGCAACAGGTGCTCTGTCAGCCGTACGTGTACCAACAGCAGCAACAGCAACAGGTAATCATGGCAGCGACAACGTCGACTTCTTCGCAGCAGCAGCAACACCAGCAGCAGCAGGCCCAGATCATCCCCGTGATCGTGTCCTCGTCGACCGTTTCCAGTTTCCTGGCGGCCTCCTCCTCCATTGCGGCGATTCAACAGAATAACCAGAGTGAAATTTCCAACTCCCAAATATTAGCTCCCTCCAACTCGCAGATGTTAGGTCCTTCGAACTCCCAGATTTTGAATCCTTCAAACTCCCAAATGTTAGCTCCTTCTAACTCCCAGATTTTGAATTCTTCAAACTCCCAAATGTTAGCTCCTTCCAACTCCCAGATTTTGAATTCTTCAAACTCCCAAATATTAGCTCCTTCCAACTCCCAGATGTTAAGTCCTTCCAACCCCCAGATACTAGGCCCTTCCAACTCCCAGATGTTAGGTCCTTCAAACACCCAAATCTTAAGTCCTTCAAACTCCCAAATATTAGACCCATCCAACACCCAGATGTTAAGCCCTTCGAACTCCTCGATGCTGAGCCCTTCCGAATTTTCCAATCAAACATTGATTCCATCAAATTCGGGTCCTTCCAACTCCCTGATGTTCGGCCCTTCCAACTCCTCGATGTTAGGTCCTTCGAACTCTTCGTTACCTCCTTCCAACTCCACTTCAAACTCAATTTTAAATCAACCCACTCTGATCTCTTCGAATTCAACGAACTCCCCGATGTTGGGACCTTCGAGTTTGATTTCATCAAACTCAACGCTGTTGAATCAACCGACTCTTATCTCTTCGAATTCAACGATGTTAAATCAACCCACTCTGATTTCTTCTAATTCAGCAATGATGGGCCCTTCCAACTCCCTCATGCTGGTTTCTTCTAATCATTCAAACTCCTCTTTAGGTCCTTCCAACTCCTCGATGCTAGGTGCGATTTCTTCAAATTCAACGATGATGAGTCAACCCAGCCTTATTTCTTCAAATGCCACGATATTGAGTCAGCCCACGCTGATTTCTTCAAACTCGGCAATGTTGAATCAACCAACTTTAATTTCTTCAAACTCTGCAATGTTGAATCAACCAACTTTAATTTCTTCAAACTCTGCCATGTTGAATCAACCAACTTTAATTTCTTCAAACTCTGCAATGTTGAATCAACCCACTTTAATTTCTTCAAACGCTACAACGTTGAACCAACCGAACCTAATTTCTTCAAATTCAATGATAGGTCCTTCGAACTCCTTGATTGTAGGTCCTTCGAACTCCTCCATCATGGCTCCTTCCATCTCCGTAGGTCCTAACTTTTTGAACCGATCCAATTTAAACTCGAAGCCTCTTCACGAAGCGACGATCCTGGCCCAGCAACCTCCCCAGTTCCTCCATTCGTCCTACGAGGAATACTCGCTGCACCACCAACAGCAGCCCTCCAACACTTACATAACCTCAACACCGAGCGGAGCCGTCTATATCTACCGTTCCAATGAAGACGAGGTGGTGGAAGAAGGTTACGGCGAAGAAAGCGAAGAGCTGAACAAGTCGTGCCAGACCAGCGGAAATGATGATGTCGAAGAAATCGTGTTGGTGAAGGATGAAGAGTGTTCGAGGAGGAAGAGATGCGGAGATGAAGCCATGTCAGAAGAAGAAGGCCAAGAGTGTTTGAAGAAATATGAAGAGGAAGAAGGAAGGTATTCAAAAGTGGAGTGCGAAGATAGAAGAAACCGAAGTTTTGAAGACGAAGAAATAGAAGAGGCAGAATTGCATTCCAAAGTGGAGTGTGAAGAAAGCAGGGTTTTAAAGCAGTGCGAAGATGACGAGCAATTGTATTTAAAGGAATGCGAAGATGAAGAAATGGAAGACCTGAATCGGTGTGAAGATGAAGAGCAAAACGGTGGGTGTTCGAAAAGGAGACTTTTAAGGAAGCGCGAAGAGGAAGATGCTAGGTGTTCGAAGAAGTGTGAAGATGAAGATCCTAGGTGTTTGGAAAAGTGCGACGACGACGAAGACTATTTGAAGGAGTGCGAAGATGAAGGAATGGAAGTTTCGAAAGTGGAGTGCGAAGAAACGAAAATTCTGTGTGAGCAGATGGTCAGTTTTAAGGGAGAAAAAGAACGCGATGCTTTCGCTTCTTCTTCGAGGCGGATTCGTGTTGAGATCTGGGAAGAAAGGAGAAGTCGAAGGACCATGTTGAGGAACTTAAAAAGCAAAGAAGAAAGAGGTCATGGTTCGAATTTGAAAAAAATCTATCAGGAAAGAAGAGGAGAAGGTGAAGATTCGAGAAGAAATCGACTATCTGGAGATGAAGACGTTAACGTGATGCAAAGGAAAAGAAGAGGAACAAATATTGCGAGACATGAAGATGAAGAAATCGATTTGACCCAAGAAAGAAATACTGAGGTTATCGATTTAAGTGAAGAAACTAACGATCGTGTTGATTTAGAAGAAGAAGGCGAGGAATCTGCAGCACGACTGGTTACGAGGAGAAAAAGCGTTCGGCGATCTTCAAAAAGAAACCAACAGCTATTCGAAGTTGAGGAAATTGAAGACGCTTCAAAAAGAAGAACCCAACAGCGATTAGAAGAATCAGATAACGAAGATCTGGCTGTTTCACGAAGCAACCAGAAGCACGCTGCTTCAAGAAGACACCGACAATTGGAGAATGAAGGTTTCTCTTCTCCTAGAAGTAATCAACAGCGATTAGAAAATCAAGACTTTGCTGCTTCAAGAAGTAACCAACAATTTAGGTCTGTAGCAATCGAAGATCCTATTTATTCTTCTTCAAGAAAAGATCAAGATGCCAATATACGCCTAACGCCTAGGAGGAGAAGATCTTCTGAAGATCAAGACGCCAACACAAGGCTAACGCCGAGAAGAAGATATCGCCGGCGGCGACGCTTCCAAGACGAAGAAAGTGATGATGACGAAGAGGAGGAAGAACTAAACGAAGACCTGAGCACTTCTCGCGTGTTAAGAAGCGGAAAGAGCACCGCTGCTTCAACTCCAAGGAGAAGAAATCAAGGTATTGAAGATCAACACTTGCTCCAGAATGAAGAAATTGTAGAACAAGCGACTTCATCAACAAGAAATTATCAACATCAATTGCTTCAGAATGTTCAAGAGCATTTGATCTTCACGAGCGGAAACCAAGAAGATAATGAAGTGATCGACGAAAGAGGAAATGAGCGCTTCGCGAGTGAAGCTAATGGAGGTTTAAGTGAAGCGGTTGAAGATAGGTTGATGTGCAAAAGAGAAAGTCAGCGTTTTGTTAGTGAAGTTGAAGCGATGGAGAGGCGCGGTTTGCTTCATGAAAACCAAATTGAAGGCCGATTTAGAAGTGATTTGCTTCACCAAGACCATAGCGCGATAGAAAGGAGCGGTTTGCTTCATGAAGACCAAATTGGAAATGGACTGGAAAGAAGCGACGAAGTGATCGAAGATAGGCTGATTTGCAAAATGGAAAGCCAGCGTTTTGCAATTGAAGCGGAAAGCAGCGATTTAATTAACGAAGACCAATCTAGGGATCGACTCAACGCGATGGATTATAATGAAGTTATCGATGATGGGTTATCGCGCCGGCGCTTCGTGAGTGAACCTACCACTACAGATAGAAGTGATCCGCTTAACGAAAACCTAGTCGAAGCTCGATTTAGAAGCGATTTACTTCACGAAACTCGAATCGAAGCTACGGAAGGAAGCGGTTTGCTTCAGGAAGCTCAAGAAAGTTCCAATCTTCAAATCGCCTACCTGCAAAGCGACGAGATTATTGAGTACGGGCCAGGCCGCGCGATTGTCGTGAAGCGACTCGACGAAGCGACCGTCAAGGATGAACCCAGCTACCTAACCCTGACTAGTGCGCGCCAATCGCCTACGCAGCTAGCGCAACCCAGACGGCGAAGCGACGCGCGCGCTTTGGATATGGACGGCATGAACCTGATGGTGAACAGTGAGTGCTTCACCTTGAACGAATACGCCATCGGTGGTGAGGAGAGCGTTTCGGTGGATGGCGCTACTATTAGGGCTGATGAGAATATGCCGGCGCGCGGGGAGCTTTCCGGACAGGAGAGCAGCAACGCCAGCGATCTGGTGGTCGCTTTGCGAAGCGGTTGCGATCTCCTGGCGAGGGAAAGTTGGGATGAGGAGGAAGAGGAGGATGATTACGAAGGGTTTCAGAATAACTTTTCAATCGGTGAAGATCCTAATTTGAGTTACGGTTGTTTTAACCGCTTTAAGCAAGATGCGGATGCCGGTGCTTCGGAAGCCGCTCAACCGATGGGGGTGTTTAAAATGGAGAAAACTACGAATTTCGCTTCAGCAGCTTCAACTTCAGCGAACGCCCAGCCCGTCGAGATCTTCAACAATGCTTCTCCTGCGAGCAGGTGTTTAAAAGCGGAGAAGACGTCGAGTTTCGCTTCATCTTCTTCGGGCAATCAACCGGTGGAGATTTTCAACAAGCGAGTTGGGATCTTCGAAGCGGGGAAAGCTTCAACTTCGCTGAACGAGCAGCCCGTTGAGTACTTCAACGCTGATTCTTCTGTGGGGTTGTTTAAAGCGGAAAAAGCATTAGCTGCTTCGTCTTCTTTGAACAATCAACCCGTTGAGGTTTACAGTATCGCTACTGGTATGAGTAACGCGCGTGTTGGGGTTTTCAAAGCGGAAAAGGCTTCGAGCTTCGCTTCGGCCGCTTCATCTTTGAACGTGAAACCGGTTGAGGATTTCAGTACCGCTTCTTCGTTGAATGTCAAACCTGTGTTCAAAACTGAAAAAACGACTGCTAAAATTTCGGTTTCTGTGGATAAGGTCGAGGATGGGGTTTTTTACGCTGGGAACCCGATAGTGTGCACAATTTGCAGTTGCGTGTTAGACTGCGTCGCTTCGCTGAAGCAGCACTCGGAGGAGGTGCACGGGCTCAAGGGGGACGAGAAGTATAAGTGCGCTGTGTGCGGCGAAGCCTTCCAGACTGAGCCCAAGTTCACGCAGCACCTGCAGGTGCACCCGCTGGAATGCCGGCTGTGTGGCAAGTATTTCTACAGGCGGCAGAATTTGCAGCTCCACCTGAAGCGCCACATGAACATCCGCCCGTACAAATGCACCTCGTGCGACAAGTCCTTCCTCACGAAGCAAAAGCTCGATGAGCACCGCAACGTGCACACTGGCGCAGCGCCGATCAAATGTCCGCTGTGCGACGAGACCTTCCGGCGCCACTCGAACCTAGTCCAGCACCGTAACCGACACCACTTCGACGTCAAGCGCAAGGTGAAGGATTTTGTGTGCGCGTGCGGCGAGGTGTTCCACACGAAGAAGAAGCTCGCCTGGCACAGGGAGACGCACGATGGTAAGCCCAAGGCGTGCGCCATGTGCTCCGAGAAATTCGTGCACGTCGCTAGTCTCACCAGGCATATGAGGAAGGCGCATAACGAGAAGTTCGTGCCTGACGCTGGGAGGGATAAAGAGAATGTGGAGTGTCCCGTTTGTAAAAACGTCTATCTTAGATCCTCGCTGGAAGTTCACATGAAAACGCACACTGGCGCCCGCCCGTTCGCCTGCAGCATCTGCAACAAAGACTTTACCACCAAGTGGAACCTCAAGCTGCACAAGTGGACGCACGCCGCGCGCGTCAACAAACCCTACAAGTGCGACCGGTGCAAAGGAGCGTTCGTGCGCGCTTCCGATTACGCCGCCCACATGAACGCCCACCGGTCAGTAAGACCCTACACCTGCAACCACTGCGGGGCCCAGTTCATCCGCAAGTACAATTGCCTGCGGCACGTGCGCGAGCACGAGCGCACCAAGACGCACGCGTGCCAAATCTGCGGGAAAGAGTTCCACCGGTCGTACTACCTGAAGGACCACATGCGCGTGCACAGCGGCGCGAGACCCTACGCGTGTCATATTTGCGGGAAAACGTCGGCGACGAAGAGTAATCACAATAAGCATGTTAGAATACATCACGCCAGGGATCCGGTCAGCACGGAGAATTAG
- Protein Sequence
- MESTGNTVCPVCTLYLRPGITLQSHLETHPKDKVIEALVRQQYVLPAVFNAQQVLCQPYVYQQQQQQQVIMAATTSTSSQQQQHQQQQAQIIPVIVSSSTVSSFLAASSSIAAIQQNNQSEISNSQILAPSNSQMLGPSNSQILNPSNSQMLAPSNSQILNSSNSQMLAPSNSQILNSSNSQILAPSNSQMLSPSNPQILGPSNSQMLGPSNTQILSPSNSQILDPSNTQMLSPSNSSMLSPSEFSNQTLIPSNSGPSNSLMFGPSNSSMLGPSNSSLPPSNSTSNSILNQPTLISSNSTNSPMLGPSSLISSNSTLLNQPTLISSNSTMLNQPTLISSNSAMMGPSNSLMLVSSNHSNSSLGPSNSSMLGAISSNSTMMSQPSLISSNATILSQPTLISSNSAMLNQPTLISSNSAMLNQPTLISSNSAMLNQPTLISSNSAMLNQPTLISSNATTLNQPNLISSNSMIGPSNSLIVGPSNSSIMAPSISVGPNFLNRSNLNSKPLHEATILAQQPPQFLHSSYEEYSLHHQQQPSNTYITSTPSGAVYIYRSNEDEVVEEGYGEESEELNKSCQTSGNDDVEEIVLVKDEECSRRKRCGDEAMSEEEGQECLKKYEEEEGRYSKVECEDRRNRSFEDEEIEEAELHSKVECEESRVLKQCEDDEQLYLKECEDEEMEDLNRCEDEEQNGGCSKRRLLRKREEEDARCSKKCEDEDPRCLEKCDDDEDYLKECEDEGMEVSKVECEETKILCEQMVSFKGEKERDAFASSSRRIRVEIWEERRSRRTMLRNLKSKEERGHGSNLKKIYQERRGEGEDSRRNRLSGDEDVNVMQRKRRGTNIARHEDEEIDLTQERNTEVIDLSEETNDRVDLEEEGEESAARLVTRRKSVRRSSKRNQQLFEVEEIEDASKRRTQQRLEESDNEDLAVSRSNQKHAASRRHRQLENEGFSSPRSNQQRLENQDFAASRSNQQFRSVAIEDPIYSSSRKDQDANIRLTPRRRRSSEDQDANTRLTPRRRYRRRRRFQDEESDDDEEEEELNEDLSTSRVLRSGKSTAASTPRRRNQGIEDQHLLQNEEIVEQATSSTRNYQHQLLQNVQEHLIFTSGNQEDNEVIDERGNERFASEANGGLSEAVEDRLMCKRESQRFVSEVEAMERRGLLHENQIEGRFRSDLLHQDHSAIERSGLLHEDQIGNGLERSDEVIEDRLICKMESQRFAIEAESSDLINEDQSRDRLNAMDYNEVIDDGLSRRRFVSEPTTTDRSDPLNENLVEARFRSDLLHETRIEATEGSGLLQEAQESSNLQIAYLQSDEIIEYGPGRAIVVKRLDEATVKDEPSYLTLTSARQSPTQLAQPRRRSDARALDMDGMNLMVNSECFTLNEYAIGGEESVSVDGATIRADENMPARGELSGQESSNASDLVVALRSGCDLLARESWDEEEEEDDYEGFQNNFSIGEDPNLSYGCFNRFKQDADAGASEAAQPMGVFKMEKTTNFASAASTSANAQPVEIFNNASPASRCLKAEKTSSFASSSSGNQPVEIFNKRVGIFEAGKASTSLNEQPVEYFNADSSVGLFKAEKALAASSSLNNQPVEVYSIATGMSNARVGVFKAEKASSFASAASSLNVKPVEDFSTASSLNVKPVFKTEKTTAKISVSVDKVEDGVFYAGNPIVCTICSCVLDCVASLKQHSEEVHGLKGDEKYKCAVCGEAFQTEPKFTQHLQVHPLECRLCGKYFYRRQNLQLHLKRHMNIRPYKCTSCDKSFLTKQKLDEHRNVHTGAAPIKCPLCDETFRRHSNLVQHRNRHHFDVKRKVKDFVCACGEVFHTKKKLAWHRETHDGKPKACAMCSEKFVHVASLTRHMRKAHNEKFVPDAGRDKENVECPVCKNVYLRSSLEVHMKTHTGARPFACSICNKDFTTKWNLKLHKWTHAARVNKPYKCDRCKGAFVRASDYAAHMNAHRSVRPYTCNHCGAQFIRKYNCLRHVREHERTKTHACQICGKEFHRSYYLKDHMRVHSGARPYACHICGKTSATKSNHNKHVRIHHARDPVSTEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -