Basic Information

Insect: Philonthus cognatus
Gene Symbol: -
Assembly: GCA_932526485.1
Location: CAKOBG010000364.1:890119-892391[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.056 12 8.9 0.0 2 20 35 53 34 55 0.92

2 14 0.081 17 8.4 0.0 1 20 61 80 61 81 0.95

3 14 0.12 25 7.8 2.4 1 23 89 111 89 111 0.96

4 14 4.2e-06 0.00088 21.9 1.1 2 23 121 142 120 142 0.98

5 14 7.8e-05 0.016 17.9 0.7 1 23 250 272 250 272 0.97

6 14 0.0029 0.59 13.0 0.1 1 21 280 300 280 301 0.96

7 14 5.3e-05 0.011 18.4 1.0 3 20 370 387 369 390 0.95

8 14 0.0014 0.3 13.9 0.3 1 23 395 418 395 418 0.96

9 14 3.2e-06 0.00067 22.2 0.1 1 23 424 446 424 446 0.98

10 14 8e-05 0.017 17.9 1.5 1 23 453 475 453 475 0.98

11 14 0.0018 0.38 13.6 0.4 3 23 483 503 481 503 0.97

12 14 0.00088 0.18 14.6 0.3 1 23 509 532 509 532 0.95

13 14 0.015 3.1 10.7 0.1 1 23 544 566 544 566 0.97

14 14 0.00011 0.023 17.4 0.4 2 23 652 673 651 673 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.056	12	8.9	0.0	2	20	35	53	34	55	0.92
2	14	0.081	17	8.4	0.0	1	20	61	80	61	81	0.95
3	14	0.12	25	7.8	2.4	1	23	89	111	89	111	0.96
4	14	4.2e-06	0.00088	21.9	1.1	2	23	121	142	120	142	0.98
5	14	7.8e-05	0.016	17.9	0.7	1	23	250	272	250	272	0.97
6	14	0.0029	0.59	13.0	0.1	1	21	280	300	280	301	0.96
7	14	5.3e-05	0.011	18.4	1.0	3	20	370	387	369	390	0.95
8	14	0.0014	0.3	13.9	0.3	1	23	395	418	395	418	0.96
9	14	3.2e-06	0.00067	22.2	0.1	1	23	424	446	424	446	0.98
10	14	8e-05	0.017	17.9	1.5	1	23	453	475	453	475	0.98
11	14	0.0018	0.38	13.6	0.4	3	23	483	503	481	503	0.97
12	14	0.00088	0.18	14.6	0.3	1	23	509	532	509	532	0.95
13	14	0.015	3.1	10.7	0.1	1	23	544	566	544	566	0.97
14	14	0.00011	0.023	17.4	0.4	2	23	652	673	651	673	0.96

Sequence Information

Coding Sequence: ATGGCTGTCGAAGCCCTGCGCCAGCTAGGAAACTCCACGTACGCCTCCAATAAAACCTCGACAAGAATCGAAACGACGTCACCGCTCGACTTACCGCTTTTACCCTGCTCGACCTGCGAGCTGGAGTTCCGCACAACCGCCGATCTAAACAGCCACGCCGAAATCTGCAGGCAGAGTCAGTTCATCTGCGCTATATGCTCCGACCCGTTCGACCGGAAAACTGACCTGAACAACCACCTGGTGTGCCACGCTGTGGAGCGGCCGCACGCGTGCCGCATCTGCGGCTCGCTCTTCATCCAGAAGGCCGACCACCAGAAGCATATGCTTACGCACGGGGTCGCTCTTAAAAACCAGCTGAACCAGTGCCAGGTGTGCGGGCAGCAGTTTCAGAGGTCATCCAGCTTGACGAACCACATGAAGATCCACAATTACCAGGCGGGGCGAGCGCTACTTAATCCGAAGATGAAGATCGAGGGGAACTCCGAGTTAACTGATATTTTAACAGGGGGCGACCCGCAGATGCAGCCCGTGCAGAAAATCACGCTGCCTAGTATAAGCCAGATGAACCCGATGAGCGGGTGGAATCTAAGCTACGAGCCCGAAAACCTGGGCTTCACGCACGAGATCCCTCTGGAGGAGGAGGAAGTAGCACCGCTCGAAGAGATTTCGAAGCAGGACTGCAGCTTCAAAATGGACATTTCTGAAACCGGCGTGGCAAACGGGGATGACGGCAGCAAGCGGAAGCCGTATGCTTGTACCAGGTGCACGAAAACCTTCGCCCGCGAGAAGGCGCTCATGAACCACCTCAATTTACATCGCGATGTCCTGGACAATTACTACACTTGCGAGCGCTGCGAGCAGGGTTTCAACACCGGCTCGGCTCTGGAGCGGCACCTGCAGTTCTGCGGGGTCAAACCGCAAAAGCAAAAAAAACTCCCCGTTGAGAACCAAGAGGATTTCAACCCCAGCAATCACGATTTGAACGCGATCAAACTTGATGTGAGTAAAAAGCCGCGCTTGAATCAAACAGTGAACCCCCCGCCGTCAGACTTGTTGAGCGACGCCAGTTTCGATGTTAACGTTTACAATAAAATTTACAAGCATGGGTGCAGCGAGTGCGGAAAGAACTTCACCACGAAGCAAAAGCTGTTCAGGCACATGTGGATACACAGGAAGAGGTCGTACTCGTGCGAGCTCTGCTCGAAGATATTCGATAAGCAGGAGCTGCTGGACGCCCACCGGCTGTCAACACACCAGTCGGGTTCACCATACGTGTGTCCGGAGTGCGGGAAGAATTTCTCCAGTAGGCAGGGTTTATGGGAAcacaatcggatccacacgacggagacgaactcattccggtgcgccgagtgcccgaagaccttcaccagccgccagggctacctgatccacaagcggaagcacaccgacgagcggccgtacggctgccgcttctgctggaaggcgttccgcgatggcggcacgctgcgcaagcacgagcggatccacaccggcgaacggccccacgcctgcccgctctgcctcaaggcattcaaccagaAGGTCGTCCTCAGGGAACACATTCGCTGGCTCCACACGGCCAACCTGAAACCCGACGACAGCGGGTTATTCCAGTGCGCTTTGTGCCCCGTCGTGATTAACGACAAGGACGAGCTGTGCGTGCACCTGGTGAAGCACAGCGATGCGATGGCGCAGCTCGCCAAGGGCGCCTCGAAGAACAATGTCGTCAACCAACCTCGGGAGCTGATTACCTTCCCGAAAATCGAGGTTAACCTCAGCTTGAAACAAGACGTCAGTATGGAAGAAAACGCCGATGATCCCCTTCTGACGCCTGACGAGGGGATCATGAACGACGTCACCGACGAGGTTATACCTAGAGCCGAGGCGGAATTCGTCGAAAGAACCGAGGTTTTATTACCGCAGGATGAAATAACGTGCGACCTGTGCGGGCTCGGTTTTTCCAGCAAAAGCCAGTTGAGCGAACACGTCCACGTTCACATTTAA
Protein Sequence: MAVEALRQLGNSTYASNKTSTRIETTSPLDLPLLPCSTCELEFRTTADLNSHAEICRQSQFICAICSDPFDRKTDLNNHLVCHAVERPHACRICGSLFIQKADHQKHMLTHGVALKNQLNQCQVCGQQFQRSSSLTNHMKIHNYQAGRALLNPKMKIEGNSELTDILTGGDPQMQPVQKITLPSISQMNPMSGWNLSYEPENLGFTHEIPLEEEEVAPLEEISKQDCSFKMDISETGVANGDDGSKRKPYACTRCTKTFAREKALMNHLNLHRDVLDNYYTCERCEQGFNTGSALERHLQFCGVKPQKQKKLPVENQEDFNPSNHDLNAIKLDVSKKPRLNQTVNPPPSDLLSDASFDVNVYNKIYKHGCSECGKNFTTKQKLFRHMWIHRKRSYSCELCSKIFDKQELLDAHRLSTHQSGSPYVCPECGKNFSSRQGLWEHNRIHTTETNSFRCAECPKTFTSRQGYLIHKRKHTDERPYGCRFCWKAFRDGGTLRKHERIHTGERPHACPLCLKAFNQKVVLREHIRWLHTANLKPDDSGLFQCALCPVVINDKDELCVHLVKHSDAMAQLAKGASKNNVVNQPRELITFPKIEVNLSLKQDVSMEENADDPLLTPDEGIMNDVTDEVIPRAEAEFVERTEVLLPQDEITCDLCGLGFSSKSQLSEHVHVHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -