Basic Information

Insect: Philonthus cognatus
Gene Symbol: -
Assembly: GCA_932526485.1
Location: CAKOBG010000461.1:1043941-1055788[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.00033 0.069 15.9 0.5 2 23 656 678 655 678 0.94

2 19 3.6e-05 0.0074 19.0 0.4 2 23 684 705 683 705 0.97

3 19 0.00012 0.026 17.3 0.5 1 23 710 732 710 732 0.98

4 19 0.0023 0.48 13.3 3.4 1 23 738 761 738 761 0.94

5 19 0.016 3.3 10.6 0.2 1 23 766 788 766 788 0.97

6 19 0.0058 1.2 12.0 3.3 2 23 815 836 814 836 0.97

7 19 0.11 22 8.0 1.4 1 20 843 862 843 866 0.94

8 19 0.00076 0.16 14.8 0.3 1 23 890 913 890 913 0.97

9 19 3.8e-05 0.0078 18.9 0.5 1 23 919 942 919 942 0.96

10 19 4.1e-05 0.0086 18.8 3.5 1 23 1116 1138 1116 1138 0.98

11 19 0.00013 0.027 17.2 3.5 1 23 1144 1166 1144 1166 0.97

12 19 7.1e-05 0.015 18.0 3.5 2 23 1172 1193 1171 1193 0.97

13 19 0.85 1.8e+02 5.2 0.1 3 23 1201 1224 1199 1224 0.92

14 19 0.012 2.5 11.0 0.6 1 23 1229 1251 1229 1251 0.95

15 19 3e-06 0.00062 22.4 2.0 1 23 1258 1280 1258 1280 0.97

16 19 0.0011 0.24 14.2 0.1 1 23 1286 1308 1286 1308 0.98

17 19 1.3e-05 0.0028 20.3 0.8 1 23 1314 1336 1314 1336 0.98

18 19 2.8e-06 0.00057 22.5 2.3 1 23 1342 1364 1342 1364 0.98

19 19 0.0022 0.45 13.3 3.7 5 23 1373 1391 1370 1391 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.00033	0.069	15.9	0.5	2	23	656	678	655	678	0.94
2	19	3.6e-05	0.0074	19.0	0.4	2	23	684	705	683	705	0.97
3	19	0.00012	0.026	17.3	0.5	1	23	710	732	710	732	0.98
4	19	0.0023	0.48	13.3	3.4	1	23	738	761	738	761	0.94
5	19	0.016	3.3	10.6	0.2	1	23	766	788	766	788	0.97
6	19	0.0058	1.2	12.0	3.3	2	23	815	836	814	836	0.97
7	19	0.11	22	8.0	1.4	1	20	843	862	843	866	0.94
8	19	0.00076	0.16	14.8	0.3	1	23	890	913	890	913	0.97
9	19	3.8e-05	0.0078	18.9	0.5	1	23	919	942	919	942	0.96
10	19	4.1e-05	0.0086	18.8	3.5	1	23	1116	1138	1116	1138	0.98
11	19	0.00013	0.027	17.2	3.5	1	23	1144	1166	1144	1166	0.97
12	19	7.1e-05	0.015	18.0	3.5	2	23	1172	1193	1171	1193	0.97
13	19	0.85	1.8e+02	5.2	0.1	3	23	1201	1224	1199	1224	0.92
14	19	0.012	2.5	11.0	0.6	1	23	1229	1251	1229	1251	0.95
15	19	3e-06	0.00062	22.4	2.0	1	23	1258	1280	1258	1280	0.97
16	19	0.0011	0.24	14.2	0.1	1	23	1286	1308	1286	1308	0.98
17	19	1.3e-05	0.0028	20.3	0.8	1	23	1314	1336	1314	1336	0.98
18	19	2.8e-06	0.00057	22.5	2.3	1	23	1342	1364	1342	1364	0.98
19	19	0.0022	0.45	13.3	3.7	5	23	1373	1391	1370	1391	0.96

Sequence Information

Coding Sequence: ATGAAACATTCAAAAACGATACCCAACGAGCTAGAGAAGTCCGTAAAAGTCGAAACGATTTATGAGCCAAAAAAATTCGTGGATTTAACGCGAATCAAACACGAGACGATCACAATCAAGACAAAAGACGGCAGAAGTGTTGCTCTGTTGCTGAAATCTACGCCAGTGATTTTTAAAAAGAACCAACAACAAGAAATGGGTGAATCTCTTCAAAAAAACGATAAAATTGAGAAAAATATGGTGATACAGAAAGGGTTACAAGAAGAAAATGGAAGAGCTTTAAAACGAAAGCGATTTAATGAAACCGACAAAATTATAGTGATGCAGACAGGATTACAAGAAGAAAATAGCGAAATCAAAAATGGGATAATACAAAACGAAAATGTTGAGACTAGAGAGAGTCTTGGTGTACAACAAGATGGAAACAAAACACAAATTGTGATGCATAAAGAACTACAAGAAGAATATAGTGAAATAAAAAAGGCAATCTTTATACAAAAGGAAAAAATTGGATTTTCTGCACAAAAAGAGGACAATGAAACAAAAAACCTAATCGAAAAAGGACTATGCGGAGAAGACGTCGAAACTCAAAAACTGCTATTTACACAAAACGATCTACAAAATGAAAACTTGGAAAGCAAAAGAGTTATAAATGTGCAAAAAGCATCACATAAAGGAGGCGTTCAAATCAAACAGTTGATCACTCTACAAAGAGATCCACGAGAAGTAAACAATGAAGCCAGAAAAGTGATCAGTATTCAAGAAGAAAAGATTGTGAAGGAAAAATTGATTGCACAAGAAGACAGCTTGGAAGGCAAAAGGGTCATCAGTCCTCAAAAACCATTACAAAAAGGAATCATTCAAATTAAACAGCTGATCACTCTGCAAAGAAACTTAGAAGAAGAAACCAATGAAAGTAAACCCTTGATATGGATAGAAAAAGATCTACAAGAAGAAAACTTTCAAACTAGAAAACTTCTTACTATTGAAAGAGAACTACAAGAAGAAAACAATGAAGTAAAAAAAATTAACAGTCTACTAACGAAAAAACTCATGCCTGAACAAGATCTGGAAGAAGCTGCTATTCAACCAAAAAAATCAATTAATTTAGACGCGGATTTACAAGAAGAAAACAATGAGTTGATTTTAGAGAAAGAATTACATAAAGGAAATGTAAGAACCACAAAAATGATCACTTTACAGAAAGAGTTTCAAATCAAAAGCGACGAAACAAAGAAATTGGACACTATACACAATATTTTAGACGAAAACAATGATTCAAAGAATATGATTACTTTACGAAGAGAATTTGAACCCGAAAAGTTAATGATTCTACAAGGTGAGGGCGGTGAATACAATGATACTAAAAATCTGATCACTGTAGAGAATGCAAAGGGCGAAAGTTTTGAAATTAATGAAAGCAAAAACGTGTTTACTGTAGAAAATAACTTTGAAGCCAATGAAAGCAAACATTTGATCATTGTACAAAATTTAGCGGACAAATCTGCTGGAAGCAATGAATACAAAAAAGTAATCACTTTACAAAATGTACTAGAGGACAGTGAAACCAAAAATTTTATCATTGTACAAAACTTCGTTGATAAAAAAATTGGGTATAATGAATGCATAAAAGGAAACACTTTCCATAATACACTAGACAAAAATATTGAAAACCACGATACTAAAAATCTGATTATTGTTCAAAACTCTGGGAACGATGAAACCAGTAAAGGAGACTCTTCTTACAATATTGAGAACTATGATAGCAAAAATCTGATTATTGTACAGAACTTTGTAGACAAAAACCTAGAAAACCAGCAGACTAATAAATTGATTAGTTCCCAAAATACTTTAGAGGATGACATTGGAAACAATGAATCAAAAGAGCTGATAAATTTAAAAAATTTAGCAAGTGAAACCCAAAAACTAATTCCACTACCAAAAACTTTAACGAAAATCAACTTAATTTGCGAAATATGCGGACGTAAATTCCCAAATAAAACAAAATACGAAAGCCACTTGAAGCAAATGCACTCTGATCAAGGCCTCAAGTGTCCCACGTGTGGAAAACTTTTGAAAACACCCAACAATTTACAAAAGCACTTACAAATCCACAAAGGACTGAAATTCACTTGCAACCTCTGCGGACTCTCTCTAGCCTCAAAATACGCACTTGAAACCCACACGCGGAGGCACAACGGTGCCTACACGCACAAATGCACCGATTGCGGGAAAGAATACTTCAACTCAAAAGCGTTTAACCATCATGTCCAAGCTGAACACGCTGGTATTAGATATCCTTGTGAAATCTGCGGGTCTATTCTAAGAAGCAGAAGATATTACAGAGATCACATGGCGAATCATTCGAATAAAgacgcaaggaccttcgagtgtaaagtttgcgATCAGCACATGAGGAAAATCCACGAATCCATAAAGATCACTTGCGGAAAGTGCGAGAAATATTTCAGAAGCGAGCATCTGCTGATGATCCACCTGCACACGCATGATGATGTTGAAAAACCATACCCTTGTCTTCTCTGCGAGGAGAAGTTCATTGATAAGAACTTCCTTAGAAACCATGTTAATTGCGTTCACATTGAATCGAAAGACGATAAAATTAGGAAATTCGAAAAGAAAATCACGATAAGTAAATTAGATAAAACTTACCCATGCTTACTTTGCGGAGCAAGTTTCGTCTCAAACATCTCTTTAAGGCATCACAAAGAAACTGCGCATTTAAAACTACCTGTTTATTCTTGTGAGCAATGCAAAACTAATTTTGCGAATCAGGATGAGCTTACTGCGCATATGAGTAACCAACATGCGCATTTAATTTTTACCCATGCCGACGAAAATTTAGTAAACACAGAAGAAATTAGAACTACGCATGTGCGAAATTTTATGGACTCGCATTGTTTCGTGGGGTCTCAAAGAAAAAAATCGCAAACGTGTGATATTGTCAGTCCTTGTTTGGTACACTATGCTTCAACAAACGTCAGCCTAACATTCGGACCAAACGTATTCTACACGCCTTTCGACGACCACGACCAAAGCAAGTACCTACTAACCTTAGTCAACTCTAAACCCCCGCCGGAAACCTCCCTTCTACAAAACCCGGTCGACCAGCTGAACGATACCGATGCCGATCTATTAAGTTTACTAGCCGCCGAAGAGAACTGCACTGCCTTACTGCAAAACATCACCGATCACAATTTCGACTCCCTGAACGAATTCTCCTCGACCGAGTTTATAGACAGCCCATACTGTGATAAACTAAGCTACGACATACCCACTTTAATAGCGGAGGTGGATCACCAGTTGGACCAGCACCAGCTAGGGGAGTTTAAATGCGGGGAGTGCGGGAAGGTTTGCACTACGAAGAAGTTGCTGCGGTACCACCTAACGACACATTCTGATGAAAGACCGCACGTGTGCGAGGTTTGTAATAAAAGTTTCAAGCTGCGCTACAAGCTGACTGCACATAGGAAATCGCACGAGAAACCTACGCTTCAGTGTGACGTTTGTCCGAAAATGTTCGTGCACACCTCGCATTTAAACGCTCACAAAAAACGCCACAACGAGGATAATTTAGTTATTTGCGATAAGTGCGAGCCTCCCAAAGGTTTCCCCTCGCACGCTCTTCTCAAACAGCACGTTTTAGTCCAGCACGAAAAAGTgcgccacatttgtgaaatctgcgggcagcacttgagctcgcaaagggctttggctgaacacaaggagatccacaagccgaaagagaagaaccacatgtgcgaaatatgcggaaaaacctacgcgaacaaccgaaacttcagagctcacctgaaaacccactcgggcgtgcgcaacttcgtctgcaacatttgcggtaaagcgcttagcagcaagcccatcttggacacccacatcaggacccacatggggaaaaaagattacgcttgcgagttttgtgataaaacgttcgtcgctaaagaatatttgacgacgcatttgaggacgcacactggagacaagccgtttcagtgccagatttgtgaaaagactttcacacagcggacgaccttaacggtgcacctgaggtaccattccggggagaggcccttcaagtgccattgcgggaagagttttgTGACCAACAGTCTCTTAAGAGGGCACAAGAAGACTCACGAAGTTGTTTCGAATTTAAGTGGTAATTCAACCACAACTTTTGTTGCTCAGTGA
Protein Sequence: MKHSKTIPNELEKSVKVETIYEPKKFVDLTRIKHETITIKTKDGRSVALLLKSTPVIFKKNQQQEMGESLQKNDKIEKNMVIQKGLQEENGRALKRKRFNETDKIIVMQTGLQEENSEIKNGIIQNENVETRESLGVQQDGNKTQIVMHKELQEEYSEIKKAIFIQKEKIGFSAQKEDNETKNLIEKGLCGEDVETQKLLFTQNDLQNENLESKRVINVQKASHKGGVQIKQLITLQRDPREVNNEARKVISIQEEKIVKEKLIAQEDSLEGKRVISPQKPLQKGIIQIKQLITLQRNLEEETNESKPLIWIEKDLQEENFQTRKLLTIERELQEENNEVKKINSLLTKKLMPEQDLEEAAIQPKKSINLDADLQEENNELILEKELHKGNVRTTKMITLQKEFQIKSDETKKLDTIHNILDENNDSKNMITLRREFEPEKLMILQGEGGEYNDTKNLITVENAKGESFEINESKNVFTVENNFEANESKHLIIVQNLADKSAGSNEYKKVITLQNVLEDSETKNFIIVQNFVDKKIGYNECIKGNTFHNTLDKNIENHDTKNLIIVQNSGNDETSKGDSSYNIENYDSKNLIIVQNFVDKNLENQQTNKLISSQNTLEDDIGNNESKELINLKNLASETQKLIPLPKTLTKINLICEICGRKFPNKTKYESHLKQMHSDQGLKCPTCGKLLKTPNNLQKHLQIHKGLKFTCNLCGLSLASKYALETHTRRHNGAYTHKCTDCGKEYFNSKAFNHHVQAEHAGIRYPCEICGSILRSRRYYRDHMANHSNKDARTFECKVCDQHMRKIHESIKITCGKCEKYFRSEHLLMIHLHTHDDVEKPYPCLLCEEKFIDKNFLRNHVNCVHIESKDDKIRKFEKKITISKLDKTYPCLLCGASFVSNISLRHHKETAHLKLPVYSCEQCKTNFANQDELTAHMSNQHAHLIFTHADENLVNTEEIRTTHVRNFMDSHCFVGSQRKKSQTCDIVSPCLVHYASTNVSLTFGPNVFYTPFDDHDQSKYLLTLVNSKPPPETSLLQNPVDQLNDTDADLLSLLAAEENCTALLQNITDHNFDSLNEFSSTEFIDSPYCDKLSYDIPTLIAEVDHQLDQHQLGEFKCGECGKVCTTKKLLRYHLTTHSDERPHVCEVCNKSFKLRYKLTAHRKSHEKPTLQCDVCPKMFVHTSHLNAHKKRHNEDNLVICDKCEPPKGFPSHALLKQHVLVQHEKVRHICEICGQHLSSQRALAEHKEIHKPKEKNHMCEICGKTYANNRNFRAHLKTHSGVRNFVCNICGKALSSKPILDTHIRTHMGKKDYACEFCDKTFVAKEYLTTHLRTHTGDKPFQCQICEKTFTQRTTLTVHLRYHSGERPFKCHCGKSFVTNSLLRGHKKTHEVVSNLSGNSTTTFVAQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -