Basic Information

Insect: Philonthus cognatus
Gene Symbol: -
Assembly: GCA_932526485.1
Location: CAKOBG010000145.1:636084-642614[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.1 70 5.9 3.4 18 38 6 23 3 29 0.87

2 13 0.061 43 6.6 0.2 14 40 45 68 41 71 0.88

3 13 2.4 1.6e+03 1.5 0.1 13 43 115 142 109 143 0.78

4 13 1.6 1.1e+03 2.0 1.3 18 40 149 168 144 171 0.78

5 13 7.5e-06 0.0052 19.1 1.1 6 41 199 228 196 230 0.88

6 13 0.011 7.4 9.0 0.3 14 43 269 295 263 296 0.86

7 13 0.35 2.4e+02 4.1 0.6 16 32 300 322 298 327 0.74

8 13 0.027 18 7.7 1.0 17 39 329 348 324 357 0.86

9 13 0.009 6.3 9.2 3.3 15 43 381 406 373 407 0.89

10 13 0.64 4.4e+02 3.3 3.4 15 29 410 424 404 437 0.77

11 13 0.003 2.1 10.8 2.5 16 39 439 459 429 464 0.85

12 13 0.00042 0.29 13.5 1.8 11 43 467 502 460 503 0.80

13 13 2.2 1.5e+03 1.6 0.1 18 29 506 517 504 523 0.85

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.1	70	5.9	3.4	18	38	6	23	3	29	0.87
2	13	0.061	43	6.6	0.2	14	40	45	68	41	71	0.88
3	13	2.4	1.6e+03	1.5	0.1	13	43	115	142	109	143	0.78
4	13	1.6	1.1e+03	2.0	1.3	18	40	149	168	144	171	0.78
5	13	7.5e-06	0.0052	19.1	1.1	6	41	199	228	196	230	0.88
6	13	0.011	7.4	9.0	0.3	14	43	269	295	263	296	0.86
7	13	0.35	2.4e+02	4.1	0.6	16	32	300	322	298	327	0.74
8	13	0.027	18	7.7	1.0	17	39	329	348	324	357	0.86
9	13	0.009	6.3	9.2	3.3	15	43	381	406	373	407	0.89
10	13	0.64	4.4e+02	3.3	3.4	15	29	410	424	404	437	0.77
11	13	0.003	2.1	10.8	2.5	16	39	439	459	429	464	0.85
12	13	0.00042	0.29	13.5	1.8	11	43	467	502	460	503	0.80
13	13	2.2	1.5e+03	1.6	0.1	18	29	506	517	504	523	0.85

Sequence Information

Coding Sequence: ATGGTAAACGGCCTAATATGTAATATCTGTGGGAGGAAATTTAACAGCAAAACCGGGCTGAGGACACATAAAAAAGTGCACTGTTCGAAAGACGCTAAAAATAAGGATACTGGTGGCGGAGAGAACTGGAGGGAGCAATTGTTTACGTGCGATATGTGCAAGCAATCGTTTCAGTTGAAAAGCAACTTGAGACGTCACCTAGAAAATTCAATCAACAAAGAAGACGAATTTACATCTAATGATCCATTACGAGATGTTTTCGAAGAATCTACTGAGAGTTCCTCTGCCAGCAATAAAAATCAGGATTCCTTCGCCGAACAAACTGACAAGATAACGGATGATGATGACTTCGCTTTTAAATGTCATGCCTGCAATATAGGTTATAAAAAACGGTGGGGGTTAAAACGGCATATCTCGTATGTGCACAGCAAAATTATTAACTACAGTTGTGATATTTGTCATAAGGGTTTTGTGGAGAAATTTCATTTAAAGAGGCACTTGACGACACACACTGATGCTATGCCGTATCAATGCGAAGTTTGTTATAAGTCTTTCGCGAAGAGTTCCGAGCTGAACACTCACAGATCATCTGTACATTTTCTCGACGACCAAAAGTCGTTTCGTTGTAACTTCTGTCAAAGAACATTTAAAAGAGAAAGTAATCTGATCAAACATTTGAATACGCATCAAAATAGTCAGGAATCTGCCGAGAATGATACCCTTGACTATCAGGAATCTACTTTCAGCAGGAAGAATGCAAAAAACGATCAACTTCAGCAAAGTAGCAAGATGGCGAATGATGACGATGGTTTGCATAGATGTGATGTCTGCGATAAAAGATTAAAAAACACGACGAGCTTAAAACGGCACGTTGAGTATGTCCATATGGGCATCAAAATGTTTAGTTGTGATATTTGTAAGAAAAGGTTCTCCACAAAAGCAATACTATCGGAGCATTTGAACACGCATGGTGATAGTCGTCCGAATCAATGCGGTATCTGCAATAAATCGTTTAACAGCAAATCTGGATTACGAATACACATGTTGCAGCACTTTCCTGAAAAGAAGAATACCGAAGAGGGTGCCTCTTTTAGCAGTAAGAATGCGGAAACTGAACATAATCAAGGTCAGGAGCAAAGTAGCTTACATAAATGCGATGTCTGCAATAAAAGATTTAAACACACGCCGAATTTAAAACGGCACGTTGAGCACGTTCACATGCGGATCAAAATGTTTAGTTGCGAAATTTGTAAGAAAAATTTCAGCACAAAAGTTATTCTGTCGGAGCATCTGAACATGCATAGTGATAGCCGTCCGAATCAATGCGGTATCTGCAAGAAATCATTTAACAACAAATCTGGATTAAGGAGACACATGCTGAAACATTTTCCTGAAAAGAAGAATACTGACGGAGGAAAGGAAAAAAATAGAAAAATTATATGCGATATTTGCAACAAACAGTTTAAACTACTTAGCAGTTTCAAACGCCACATGCAAATGGTTCATATGACACTTAAATGCGATGTTTGTGGTAAACAGTTCCGTGAGAAAAGTGCAATGGATGTGCATGTTTGCTGGAACCAGGGTGAAAGTGAGGGAGAAACTAGTCCGTATAAATTTTTTGAGGTTATGTCACTAAATGTAAACACGGTCATGCGCATCCCAGTGCGCATGGGAAGAATGCCGATGCCTCTTTTCTATTTGGGCAGCAGTACGCACGCTTTGTTCTGCGCACAGCTGGCGCGCGCTACCTGCTCCGGCAGGGGTGTCGACTACCTTTACATAATCTCGCATAACTTCGACAATTTGTTTCCAATCGACATGAAACTTTAG
Protein Sequence: MVNGLICNICGRKFNSKTGLRTHKKVHCSKDAKNKDTGGGENWREQLFTCDMCKQSFQLKSNLRRHLENSINKEDEFTSNDPLRDVFEESTESSSASNKNQDSFAEQTDKITDDDDFAFKCHACNIGYKKRWGLKRHISYVHSKIINYSCDICHKGFVEKFHLKRHLTTHTDAMPYQCEVCYKSFAKSSELNTHRSSVHFLDDQKSFRCNFCQRTFKRESNLIKHLNTHQNSQESAENDTLDYQESTFSRKNAKNDQLQQSSKMANDDDGLHRCDVCDKRLKNTTSLKRHVEYVHMGIKMFSCDICKKRFSTKAILSEHLNTHGDSRPNQCGICNKSFNSKSGLRIHMLQHFPEKKNTEEGASFSSKNAETEHNQGQEQSSLHKCDVCNKRFKHTPNLKRHVEHVHMRIKMFSCEICKKNFSTKVILSEHLNMHSDSRPNQCGICKKSFNNKSGLRRHMLKHFPEKKNTDGGKEKNRKIICDICNKQFKLLSSFKRHMQMVHMTLKCDVCGKQFREKSAMDVHVCWNQGESEGETSPYKFFEVMSLNVNTVMRIPVRMGRMPMPLFYLGSSTHALFCAQLARATCSGRGVDYLYIISHNFDNLFPIDMKL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01185412;
90% Identity: iTF_01185412;
80% Identity: iTF_01185412;