Basic Information

Gene Symbol
Trerf1
Assembly
GCA_932526485.1
Location
CAKOBG010000244.1:22255-49773[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 7.4e-14 5e-10 41.6 0.1 2 46 1155 1199 1154 1199 0.97

Sequence Information

Coding Sequence
ATGCCAAATAACGTTTCGGTGTCGCGCACAGACTTTCCTTTCATCACTACCTCGGATTCTTGGGGAATTCACGGATTCGAACGCGTCGTGATTTTAAAATTTATAAGGGCTAACGTGCACACGGCGGGGTTCACTCAATCCTGGCATTTATCGTCATTATATGAGGAGTTTGGGGGGTGGGCCTTGAAAAGCCTAGGGGTGTCTATCCGCCCGTTCGGTCCACATTTGGTCTCTTCCACCGATGACAAGAAAGTGCAAGGATCAACGACAGAAGTTGTAAAGTTGACTGTGAAACGGGCGAGGCCTAAAGCTGCGTCTCCCAATAGACAAGGACCGCAGCAATGCCAGGTGTGTGCGAAGGTTTTTGGAAATGCATCAGCGTTGGCCAAACACAAACTGACTCACAGTGATGAAAGGAAGTACGTGTGCACTATGTGCGGTAAGGCGTTCAAACGGCAGGACCACCTAAATGGACATATGCTTACGCACAGAAACAAGAAACCCTACGAGTGCAAAGCGGAAGGATGCGGGAAATCCTACTGCGATGCGCGCTCGTTGAGGCGGCATACGGAAAACCACCACAATTCCACATCGTCGGGTACCACCACGACCATGTCACCAGCTCAAGGAGCGGCCTCTGGAGATGCCGCCTCCCCGCACGGTTCCAGCTGTATACAGTACGCTCCTCCGCCCAACAACACCACCACAACAACGACTGGGAAGAGCCAGCTTCAACAACTATTAGCAACAGAACCGGCAAAGAGCGGGAATGGAGGAAATAACGATGGCCTAACCAAACAACAACTGGATCTCATCCACCAGATCATGGAGCAGACACAAAGGCAATCACAAACGACGACGGCGACGGCGAAGACGCCCACGAAACCTTCTGCGAAGCCGGTCACTAAAACGCCAGTCAAAGTTCAAAGGGTCTGGCCTCCAACAGCTCAACAAAATAATACAAGTAAAGGAACGACCAGCCCTCAAAATAAAGTGACCAGCACAGCATCAAGCACAACCGCATCCTCGACCAACAACAGCAAAACCGAGCCGAAACCAGTAGAATGCAACCTGTGCCATCGGAAATTCAAAAACATCCCCGCTCTCAACGGCCACATGCGCCTCCACGGAGGCTACATCAAAAAGGACGCGGACAGCAAAAAGTGCGAGAAGAAGGACTCCACCGGACCTCCACTGCAAACAGCCAGCGTCAGCGTGCGAGCTCTGATCGAAGAGAAAATCATCAACAAGAGGATCACCAACGCGCCGACGACGACAACCACGAGTAGCAGCGAAGAAACTGCGAACACAGCGCCACCTTTGTTTCCGTTAACAGTGCATTCCTCGGCGGCGGCTAGTAACGAATTGGAGGCGAAGGTGTCGTCTTTCGTGGTACCCGCTCCTCCCCAATCCAACACGGAAAAATCTAGAAGACATTCCGACGCCGAGGCTTTCACAATACCCAGGGCGCCCAGTTCGCAGCAGGAAGCCGAGGCTTTAGCTGATTTGATTTTAAAGCGGGATAAAGTCGGGGTGAAGAGGGCTACCTCGGATCCCGGACAGTCGCAGACCCAGTCGCAATCGCAGATCATCCAATTTCAATCCGGGGATTCGTTCACGCTGACTTATCCCTCCGAGGAGGGGTATCTTTCGCCCAGTTTGCAAGATGAGGTCTTCACGCAGGTGCAGGACAGCATGCTGCTGCAGAGCGTCGATCCGCAGCAGTTGGCTTCCATACAATTCCAAACTGATAGCCTCCTGCAAGACCAGAGCGAGAATCAGCTTCACGATATCAGCATGGATGACTACGCGAGCTCTGTCCAATCACCGACGTTTCAGTCGAGCCATTCGGTTAACCAGGAGCTGCAAGCGGTTTTGGATTCCCCGCTTCCGGAAAGCCTGGCGGAGTTCAGCACCTTCCATTCCACCAGTAACTTAGACATCCCATCGCCTAATTATCAAACCCAATCACCGGCTCAATACTCAGGTTCTCCACACGCTTCCATTTCAACACAATCCCCGCTGCAATCGCCGTTGATCAGGCACGACTCGCCGGGGTTTGCCTACCCGACCCCACCAGCTAGTCACGAAGGTCAGAGTCCTTGTTTCGGGCAGAACACCATGCTTCCGATGGTTTCCCCGAAGCAGAACTCTGATTTTACGGTTGTTAACCGGGACGTGGATGAACCCCCGCAGGCCTCGTCTCCTTTATCAGCAGCGTTTTTTACGTCCACCATGTCGAGCTCTGCTGCAGTCGAAGAAGCGCTCGAGGAAGTCCTTCCCGGCGAAACCATAGCTGCTGATGAGTTGTATCCCTCGTTAACTAACTCCCCGCCTCCCCAATCCCCTTTATCAGTTGGACTAACACCCGTGCAGTCTCCCCTTTCAAACATACCCACTACGACAACATCCTCTCCACACCACAACACCCTCAACACAATCTCCTTTCCACTATCCCCGCACTTCACCCTCCAATCGCAAATGCTGCCTAACTCCGACGATCCGCTCCTATCCTCTTCCCCGAAAGACTTCACCGCTCGGAAAAAATTCGAATTCAACGGGCTTCCCCTGAAAGTAATCAGCAGTAACGGGCTGCTCGATTTGAACAGTAGTAATTTAACGGGGATCCTCGTTGAATCCAACGGGGAGATTAAGTTTATCCAGACTGGAGGTGGCGGGTTTCAAGGGAAGAACATTTTATTAACGGGGACGCCGCTGCTAACGACACAGAGTATCAATAAGGACGATGACGCGAAGAACAATCCCAGGGTGCAGAAGATTTTGAAGACGGTACAAAATGCCTTACCTAAAACGGTTCAGGTGCAGAGGGCTGCGATGGATCGACAGGAGGATATCATCAACGATGTTTTTTTAAGTCCAACAACGATACCGGCGAGTCCGGTGAGGATTTCCAGAAAGCGCCTACGGTCAGAACCCCTGCAGCTTCCAGTGCTGCACCAATCACGACTGAGGGCCACGAGAAGCAAACCCCAAGGCTCTGCGCCTTACACGCCTTTACCGATCCTCAACCCCAATCGACCGGGATCAGGGTTGTATTACTACCTAAAGCAAAAAACGTTAGATAATCAAGATGAACCTATAAGTTGGAGCAACGAATCAGTGCCAGAATCTGATTCAACGCCCCACATAAACGTAGGTCCGCAATTTCAGTGCCAAATACCCGCCTTCGCTCCAGCCTACAGCCGGATCAGCCAAGAGAGGACCCACGAGGATCTCCTCTGGGACCCCGGCATAATCAATTGCACGGATAGTGAAGTTGACATGTACTTGGATTTCGCCTGCTGCGCAGCCGTCCCCGGTGGAGGGAGGAATCAAGAGTACGCCATGCACCTCCTGCAGATGTGTTCAGGGAATATACACGATGCGATGTTGAAGCTGATGCAACCCACGCCTTCTCTTCCTTCGGAGCATCCGCTGCTGCGCTATCATTATTCCGATAGCGATAAATGGACAGCAGCGGAGACTGAACTCTTCCATCAGGCGTTGCACAAGCATGATAAAGATTTCTCGAATATTGCTCAAGAGGTTGGATCAAAAACAGTGAAACAGTGCGTCCAGTTCTACTACATGTGGAAAAAAGTGTGTACAGACGAATACAGAAGATTTAAACAGACTCGAGAGAAACGGCTCGGACAGAATAAAAATTTGGACTTCGAAGAAGAAAAGCCTTACCCCGATGCCAAATTATTAGGGATTGCAGATACTGGTTCCCCTATGCCAATACAAGAACACAGGAACTTCATTTGCGAATTCCCTGAATGTTCAGCTAGTTTTAACTCAAGAGCCGCCCTGAATGGTCATATACGGATACACGGCGGTAGTGCGAGGAATTCCCCTAGTCCGGCTCTGGTTCTGGAGAGAAGACAGTCGTCTTCGACGACCAACGGAATCTCGGTCCATCATCCCTTCTGTCATACGTCGGATTCGACCGAAGACTACCCCTGTAAGATATGCGGGAAGGTGTTCACGAAAATCAAAAGCAGAAGCGCCCACATGAAATCGCACAGGCCCCCGGACGCCGATCCGGCGAGACGGAGGGAAAAGGAACCAGTCACCTCCACCACATTCGATTCCATACCGAGCCCGTTCAGCACTTAG
Protein Sequence
MPNNVSVSRTDFPFITTSDSWGIHGFERVVILKFIRANVHTAGFTQSWHLSSLYEEFGGWALKSLGVSIRPFGPHLVSSTDDKKVQGSTTEVVKLTVKRARPKAASPNRQGPQQCQVCAKVFGNASALAKHKLTHSDERKYVCTMCGKAFKRQDHLNGHMLTHRNKKPYECKAEGCGKSYCDARSLRRHTENHHNSTSSGTTTTMSPAQGAASGDAASPHGSSCIQYAPPPNNTTTTTTGKSQLQQLLATEPAKSGNGGNNDGLTKQQLDLIHQIMEQTQRQSQTTTATAKTPTKPSAKPVTKTPVKVQRVWPPTAQQNNTSKGTTSPQNKVTSTASSTTASSTNNSKTEPKPVECNLCHRKFKNIPALNGHMRLHGGYIKKDADSKKCEKKDSTGPPLQTASVSVRALIEEKIINKRITNAPTTTTTSSSEETANTAPPLFPLTVHSSAAASNELEAKVSSFVVPAPPQSNTEKSRRHSDAEAFTIPRAPSSQQEAEALADLILKRDKVGVKRATSDPGQSQTQSQSQIIQFQSGDSFTLTYPSEEGYLSPSLQDEVFTQVQDSMLLQSVDPQQLASIQFQTDSLLQDQSENQLHDISMDDYASSVQSPTFQSSHSVNQELQAVLDSPLPESLAEFSTFHSTSNLDIPSPNYQTQSPAQYSGSPHASISTQSPLQSPLIRHDSPGFAYPTPPASHEGQSPCFGQNTMLPMVSPKQNSDFTVVNRDVDEPPQASSPLSAAFFTSTMSSSAAVEEALEEVLPGETIAADELYPSLTNSPPPQSPLSVGLTPVQSPLSNIPTTTTSSPHHNTLNTISFPLSPHFTLQSQMLPNSDDPLLSSSPKDFTARKKFEFNGLPLKVISSNGLLDLNSSNLTGILVESNGEIKFIQTGGGGFQGKNILLTGTPLLTTQSINKDDDAKNNPRVQKILKTVQNALPKTVQVQRAAMDRQEDIINDVFLSPTTIPASPVRISRKRLRSEPLQLPVLHQSRLRATRSKPQGSAPYTPLPILNPNRPGSGLYYYLKQKTLDNQDEPISWSNESVPESDSTPHINVGPQFQCQIPAFAPAYSRISQERTHEDLLWDPGIINCTDSEVDMYLDFACCAAVPGGGRNQEYAMHLLQMCSGNIHDAMLKLMQPTPSLPSEHPLLRYHYSDSDKWTAAETELFHQALHKHDKDFSNIAQEVGSKTVKQCVQFYYMWKKVCTDEYRRFKQTREKRLGQNKNLDFEEEKPYPDAKLLGIADTGSPMPIQEHRNFICEFPECSASFNSRAALNGHIRIHGGSARNSPSPALVLERRQSSSTTNGISVHHPFCHTSDSTEDYPCKICGKVFTKIKSRSAHMKSHRPPDADPARRREKEPVTSTTFDSIPSPFST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01186528;
90% Identity
iTF_01185520;
80% Identity
iTF_01185520;