Pcog008238.1
Basic Information
- Insect
- Philonthus cognatus
- Gene Symbol
- SMARCC2_2
- Assembly
- GCA_932526485.1
- Location
- CAKOBG010000041.1:586464-588745[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-14 1e-10 43.8 0.1 3 44 320 361 319 363 0.96 2 2 4.6 3.1e+04 -2.5 0.0 6 17 567 578 566 580 0.81
Sequence Information
- Coding Sequence
- ATGCCGAAGCTAAAAAGCAGACCTGACGAGGAACAAAGACACAGCAAGCGAAAGCGATCTTTATCCCCGCCGGAAACTCCGGTTAACAAACGCAAACACCGAGGTAGAAATGCCGCACCTGAGGTCGAGGAACCTGTTAAAGAAATCGAAGAAAAGGAGCAGGTTGCGGAGAAAATCTTGGAACCCATGGAGGAAGTAAAAATGGAAAGTGATGAGTTGAGCAGGGGTGCTGCAGAGGTGGAGCACTCTAACGATTCTAACATGACCCCGCAAGAGGAGATGTCGAATGATTCCACGATTATTAAAGATGAGGATAATGTGGGGAATTCAAATGATTCGTGTAAGAAAGGGGAGAATTCAAACAATTCAAAATCGGCCGCATCAGAGGACGACAACGTTATCGAGCAGATGCATTGTGTGATTATTCCCTCGTATTCGTCTTGGTTCGATTATAACTCGATTCACGAGTTGGAGAAGCGTGCTCTGCCGGAGTTTTTCAACGGGAGGAATGCGTCGAAGACGCCGGAGACTTACTTGGGTTTTCGGAATTTCATGTTGGATACCTACAGGCTTAATCCGGGGGAGTATTTGACGTGCACTGCATGTAGGAGGAATTTAGCGGGGGATGTTTGCGCGATTATGAGGGTGCACGCTGTGTTGGAGCAGTGGGGGTTGATTAATTACCAGGTTGATACGAAAGCAAAGCCGTCGGGAATGGGGCCACCGTCGACTTCGCATTTTCATATGATCAGCAATACTCCCTCGGGATTGCAACCAGTTAACCCTCCGAAACCTGTTCAAGAAGCACCCGATAAAAATTTACTCGATTTGGATAACGTGAAAAAAGTCGAGAGTGTTAATATCGAGGAGATCGGGAAGTTTGGATTGAAACAGGATCAATACACCAAGCAAGTTCCGCCTGTTTTACGAAAGGAAAAGGGCAGAGAGTCGGTGAGGGATTGGACTGAACAAGAAACTCTCGCTTTGCTAGAAGCTTTGGAAATGTACAGTGATGATTGGAACAAGGTTTGTGAGCATGTGGGTTCGCGTACGCAGGACGAGTGCATTTTGCACTTTCTGCGTTTGCCGATCGAGGATCCTTATTTAGAGGACGAGGTTTTGGGGCCCTTGGCTTACCAGCCGATTCCGTTTAGTCAGAAAGGGAACCCCATTATGTCGACGGTCGCCTTTTTGGCTTCCGTTGTAGATCCGCGCATTGCTGCTTTGTCTGCAAAGGTGGCCATGGACGAGTTTGCAAAAATTAAAAACGAGTTACCATCGGAGGTTGTCGAGGAATATATGAAAAAAGTGCAGGCTGCTGTTGTCGATGGGAAATTTGATCCTTCGGTTGTTTTATCAACCAGTGGTATTGCGGGAACAGAGAGGGACGAAGAGGAACCAACAGAAAAATCCGAGAACAATTCGACAAAAACTACAGATAAAGAAGAAGAAAATACAGCAAGGGAGAAAGAGAAATCCGAGTCAGAAGGGCAAAAGCCAGAACCTGCAAAGGAGAAAAATCTCGAATCAACTGAAGAAACATTAGCAGAAAAATCCTCGGAGGATCCAGAATCGGAGAAATCAAACGAATCTATGGAGAAAAAAGAAAAGAAACCAAAGGTCGTCCTCGATAGCAAAGTGCAAGAAGCCGCCGCTGCGGCGCTAACAGCCGCCGCGATCAAAGCGAAGCACTTATCCACCGTCGAGGAGAAGAAAATCAAATCGCTCGTCGCCTCCTTGGTGGAGACTCAGATGCGCAAGTTGCAGAAAAAGTTGCAGCACTTCGAGACGCTCGAGGCGACTTTGATGAAGGAGCGCGAGCGGCTTGAGTATTACAAGCAGCAGCTGATCGTGGAACGGCAGCAGTTTCATTTGAAGCAGTTGAAGGTCGCTGAAGAGCTGGCCAAGCAGAAGCTGTTAAACGAGGGAGGGGTTCAAGGGGGACCTACCGCAGTCGGCAAGTTGGAGCCCCATGTCTTGTCTCAGCCCGCTTTGCAGTCGACGACTAAAGTTGTTTCACCATCGTCATCTTCATTATCAGAATAG
- Protein Sequence
- MPKLKSRPDEEQRHSKRKRSLSPPETPVNKRKHRGRNAAPEVEEPVKEIEEKEQVAEKILEPMEEVKMESDELSRGAAEVEHSNDSNMTPQEEMSNDSTIIKDEDNVGNSNDSCKKGENSNNSKSAASEDDNVIEQMHCVIIPSYSSWFDYNSIHELEKRALPEFFNGRNASKTPETYLGFRNFMLDTYRLNPGEYLTCTACRRNLAGDVCAIMRVHAVLEQWGLINYQVDTKAKPSGMGPPSTSHFHMISNTPSGLQPVNPPKPVQEAPDKNLLDLDNVKKVESVNIEEIGKFGLKQDQYTKQVPPVLRKEKGRESVRDWTEQETLALLEALEMYSDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDEVLGPLAYQPIPFSQKGNPIMSTVAFLASVVDPRIAALSAKVAMDEFAKIKNELPSEVVEEYMKKVQAAVVDGKFDPSVVLSTSGIAGTERDEEEPTEKSENNSTKTTDKEEENTAREKEKSESEGQKPEPAKEKNLESTEETLAEKSSEDPESEKSNESMEKKEKKPKVVLDSKVQEAAAAALTAAAIKAKHLSTVEEKKIKSLVASLVETQMRKLQKKLQHFETLEATLMKERERLEYYKQQLIVERQQFHLKQLKVAEELAKQKLLNEGGVQGGPTAVGKLEPHVLSQPALQSTTKVVSPSSSSLSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01186137;
- 90% Identity
- -
- 80% Identity
- -