Pcog057578.1
Basic Information
- Insect
- Philonthus cognatus
- Gene Symbol
- SMARCC2
- Assembly
- GCA_932526485.1
- Location
- CAKOBG010000326.1:2225214-2235393[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.5 3.7e+04 -2.8 0.0 32 43 199 210 197 212 0.85 2 2 8.7e-15 5.9e-11 44.6 0.2 3 44 593 634 592 636 0.96
Sequence Information
- Coding Sequence
- ATGATCGCTTTCGGGCCGAAAAAGGATGGCAGTCCGAACGTCAAATACTTCGAATCGCCCGAAACGCTGAACGCGCTGGAAAATGTTAAACAATGGCTCCAGAGGAATGCCAAAAAGCTCGTTCAGTCAGACCCCCCGACGAACAAATCGCTGTCCACTTTAATTATTCAGCTCCTTCAATTTCAAGAGGATAACTTGGGGAAAAGTTTGCAAAAGCCGTCCATGACGAGGATTCCCGTCAAATATTTCATGGACTTCAAACCGGGCGGCTCGTTGTGCCTGATGCTCGCCGCCGCTTACCGGTTCAAATTAGATCAGGGTTGGAGGAAGTTCGATTTTCAAATTGTCAAGAACCCGGGCAGATTAGAGAAATTGATCGAGTTGTTCCAAGCGATGGAAAAGACGCTGGCTCAGAACAAGGTGTACAATCTGCCGAGCATTTATATCAAATCGGAGGTGGATAAGGCTCTGGCGGCCAAGTTGCGGGATATCGTTAAGAAACGCAACGGACAGGTGGTGGAGAGCGAAATGGCCTCCACGCACATTTTGTATCCCCACTGTGATCCGTTGGAAGAGGAATATGCCAGACCTGGTATGAGACAAGATAAAATGATCATGATGCACTGGTATTATTTCCCAGAGTCTTATGATACCTGGGTAAATGTTGAGGGTGCGCTAGAAGGATTACCAACAGATTCCAATACTGTACACACCGGCCCATGGAGGGTGTCCTCTACTTGGCTTCTAGATTCTGACCAATATAACGAGTGGATGAGCGAGGAAGATTACGAAGTGGACGAAAATGGCAGAAAAAAAGTCCATAAAATGCGAATGTCTGTTGAAGACCTTATGAATCCTTTAGGTGATGATAAAAATAAGAAAAAAGCAAAACGAAAGAGATCGCCATCACCACAGCTAAAAGCCGGTAAACGGAAAAGTGGCAGGAGTCCCGCCGTGGGAAAAGGCAAAGGCAAATCTGACGATACGGAATCCGAAGATCTGACAAAGGACATGGAGGATCCGATGCCAGAACCGAATATTTCCGAAATTAACCCTTCGACTTCTGCTGGGCAAATCGGGAAAAAAGACCACGAACTGCAACCGCTCAAGGGAGGATCCATTACGGACTTGGATGATAACGAGGAAAGATGCGAGGATTCTCAGACTGGGAAAAATTCCGACACGACTACTCAGGATGACGGTCAAGAAGATAACGTAACGGAGCAAACGCATCATATAATAGTACCTTCGTATTCGTCTTGGTTTGAATATAACTCAATACATGAAGTCGAAAAGAGAGCACTGCCTGAATTCTTCAATGGGAAGAATAAATCGAAAACACCGGAAATTTATCTTGCTTACAGGAATTTCATGGTGGATACTTACAGGTTAAATCCTACCGAATATATTACAAGCACAGCGTGCAGAAGAAATTTAGCTGGAGATGTGTGTGCCATAATGAGAGTTCACGCGTTCCTCGAACAATGGGGTTTGATCAACTATCAAGTCGACACGGATTCTAGGCCGACGTCCATCGGACCGCCGCCCACCTCTCATTTCCACATACTGTCGGACACGCCTTCTGGCTTACAACCGGTGAACCCCCCGAAAACATCCCAACCGAGTGCGGCGAAAACCCTTCTGGACCTGGACCGAACGCAGGACACCAAGAAGTCGGAAAACGCCGAATCGATTTCTAGTTTCGGGTTGAAATTGGATCAGTACTCCAAGAAACCGGGCGCGTTGAAAAATAAAAGCGCTGCGTCGTTAGTAAGGGACTGGACTGAGCAGGAGACTCTTTTGCTGTTGGAAGGGTTGGAGATGTACAAAGATGATTGGAATAAAGTTTGCGAACACGTGGGGTCACGAACGCAAGACGAATGCATACTGCACTTTCTCCGGTTGCCGATCGAAGACCCCTACCTGGAGGATCCAGAGGCCGGTGGAGCTTTAGGGCCGTTGGCTTACCAGCCGATTCCGTTCAGCAAAGCGGGGAACCCGATTATGTCGACGGTGGCGTTTCTCGCGTCGATAGTCGATCCTAGGGTTGCGGCAGCTGCGGCCAAATCCGCTATGAACGAGTTTGCTAGTATTAAAGACGAAGTCCCCTCCGCTTTAATGGATGCGCATCTGAAAAACGTTGAAGCTTCGTCAGTCGAAGGAAAATTCGATCCCACGGCGGGGTTGGCCTTGAGTGGGATTGCCGGGACGATTTCTGATAAGGAGGATGAGGACAAGATCAAAAAAGAAATTGAGGTAAAGGAAGAAGATAAATCTGAGAATCTCGAACAGAAAAAAAACGGAATCGAACCGTCCGACGAGAAGCCGGAAGATAAAGAAGTGAAAGTGGAGTCGATGGACAGTGATAAGGACGAGAAAATGGATACTAGTGACATTATACCCGATAAAGTCGTCCGCGACAACGAAATGCAGAGCGCAGCTGCCGCCGCGCTAGCCGCAGCGGCTGTGAAAGCAAAACACCTGGCGGCCGTCGAGGAAAGAAAAATTAAATCCCTCGTAGCGCTGCTGGTGGAAACGCAAATGAAAAAGCTCGAGATAAAACTTAGGCATTTCGAGGAGCTGGAAACCACGATGGAGAGGGAACGCGAGGGTTTGGAGTATCAAAGACAGCAGCTGATCACCGAACGGCAGCAGTTTCACCTCGAGCAGTTGAAAGCGGCTGAATTCAGGGCGAGGCAGCAGGCTCATCAGAGGCTGCAGGCCGAGCAGGGGCAACAGTGGGCGCAGCAGCCGGCAGCGCCGCATTCGCAGAGCTCGGAGACCGGGCCCAACTCCACGCCGACCCCGCCGTCTCCTCAAGCTTCTGCCGTGGCTTCACCCGCTGCTCCCCACCATCACATATAA
- Protein Sequence
- MIAFGPKKDGSPNVKYFESPETLNALENVKQWLQRNAKKLVQSDPPTNKSLSTLIIQLLQFQEDNLGKSLQKPSMTRIPVKYFMDFKPGGSLCLMLAAAYRFKLDQGWRKFDFQIVKNPGRLEKLIELFQAMEKTLAQNKVYNLPSIYIKSEVDKALAAKLRDIVKKRNGQVVESEMASTHILYPHCDPLEEEYARPGMRQDKMIMMHWYYFPESYDTWVNVEGALEGLPTDSNTVHTGPWRVSSTWLLDSDQYNEWMSEEDYEVDENGRKKVHKMRMSVEDLMNPLGDDKNKKKAKRKRSPSPQLKAGKRKSGRSPAVGKGKGKSDDTESEDLTKDMEDPMPEPNISEINPSTSAGQIGKKDHELQPLKGGSITDLDDNEERCEDSQTGKNSDTTTQDDGQEDNVTEQTHHIIVPSYSSWFEYNSIHEVEKRALPEFFNGKNKSKTPEIYLAYRNFMVDTYRLNPTEYITSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDTDSRPTSIGPPPTSHFHILSDTPSGLQPVNPPKTSQPSAAKTLLDLDRTQDTKKSENAESISSFGLKLDQYSKKPGALKNKSAASLVRDWTEQETLLLLEGLEMYKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDPEAGGALGPLAYQPIPFSKAGNPIMSTVAFLASIVDPRVAAAAAKSAMNEFASIKDEVPSALMDAHLKNVEASSVEGKFDPTAGLALSGIAGTISDKEDEDKIKKEIEVKEEDKSENLEQKKNGIEPSDEKPEDKEVKVESMDSDKDEKMDTSDIIPDKVVRDNEMQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHQRLQAEQGQQWAQQPAAPHSQSSETGPNSTPTPPSPQASAVASPAAPHHHI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00902171;
- 90% Identity
- iTF_01186136; iTF_01096564;
- 80% Identity
- -