Pcog001952.1
Basic Information
- Insect
- Philonthus cognatus
- Gene Symbol
- Arid4b
- Assembly
- GCA_932526485.1
- Location
- CAKOBG010000009.1:2247237-2262488[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-28 3.2e-24 87.4 0.6 1 89 295 380 295 380 0.95 2 2 2.6 4.1e+04 -2.6 0.1 48 68 492 512 486 520 0.78
Sequence Information
- Coding Sequence
- ATGCAAGGCGACGACCCCCCGTACCTTTCCGTGGGGACAGCCGTCAGCGCCAAATACAAGGGGGCCTTCTGCGAGGCTAAAGTCAGCAAAGTCGTTCGTATTGTAAAATGCAAGGTTACGTACAAAATGGGATTGGGCACAGCCACTGTGAATGACGAACAAGTGAAAGGACCTCTCAGGGTGGGACAGCTGGTGCAGGCGAAGCATCCGGACAGGAAGGAGTTCATCGACGCTAACATCACTAAGATTCAGGATTGTAGTCAATATACTGTCGTGTTCGACGATGGTGATATAACGACGTTAAGACGAACGGCTTTGTGTTTGAAAAGCGGCAGGCATTTTAACGAGAGCGAGACCCTCGATCAGCTACCGTTGACGCACCCCGAGCATTTCGGGAATCCAGTCATGGGCGGGAGGCGAGGGAGGAGGAGTCGGCAATTGAAGGAGGATAGCAGTGAAGGCGAAGTCGAGGAAGAGAATGAGCCCGACTTGGAACAGTACAGCGTGGACACGGGAAAAGTTGTAAGCGTTGAAGCTAGCGACAAAAAGAGGAGCAAAGACAATTGGTTTCCGGGTCTGATCGTGATGCCTTCGGCGCAACCTACAGTCAGGATCAATGTCAAGGATGAGTTCCTCGTCAGGTCTTTCAAAGACGGAAGATATTATACGGTGCCAAAGAAGGAGGTGAACGAGTTCAAGAGGGAGATGGGTGCCCGAGTTGAGAGCTCAACGCTGTCAGAAGCCGTCGACAAGGCGATCAAGTTTTTAGACAACGACGAGCTCCCGGTGCACTGGGAGAGGAACTCACTGTTCAATGTGCAATCGCAGTATTCGGACTCAGATGAGAATTTTTCAGATAGTTCTGATGATGAACCGACGGAAGAAAAGGACCATTTCGTTGCCCAACTGTACAAATTCATGGACGACAGCGGCACCCCGTTAAACAAAACCCCGATGATCAGCAACAAAGATGTCGACTTCTACCGACTGTTCCGTTTAGTGCACAAACTCGGCGGCTACAACCGCGTCACAAATCAGAGCAAATGGAAAACGATCGCGATCCGTTTGAAATTCTCGCAATCGCAAAACACTTACAATCAAGTGAAGCAAGTTTACAAAAAATGCTTGTTGAGTTATGAATCTTTTTACCGGACTCTGGGGTGCACGATGTTAAATCACACGCGGAACGCTAAGAAAAACCGCGGGCGGAATTTGATAAGGGATAAGGATCGGGTCACGCCAGTGCAGAGCCCTCGGCCGGAAAGAGACGAGGAGGAGTTGAAGAAGGACGAGGAGAAAGAGAAGGAAAAGGAGAAAGATGTTAAAGATAAGGATAAGAAGAAGAAAGTCTTGGAGGAGGATAAAAAGGAGAAGGAAAGCAGCGAGAGCAGCAGCGAGTTAACCGATCATTCTTCCGAACAGCAGCCGAGCACGAGTAAGGAAATTTTTAAAACGAAAAAGGTGGTTGAGGCTAAGGTGAAGGAGAAGAAACGAACTCCTTCGGTGACTGAGAAACTTAAAGTTGAAGAGACGAAAAAGGAGAAGGAAAAGGAAGATGAGAAAGAGAAGGAAAAGGATAAAGAGAAAGAAAAAGATAAATCTTCTATGCAGCAGACAAGATCCAAATCGAATATTTTTAAAACTAAGGAAATAGTGTCGCCGGAAAGTGTCGTTAGGGAGACTAAAACGCCCGTCAAGGAGACGCAACCCAAAATCGTGACTAAAAGTCTCTCTAAAAAAGTTGTTGAAGATGATAAGGAAAAGGATAAAAAAAGAGGGAGGAAGAGGATTAATACAGATGATAAGACTTCGAATTCTGATAGCAGCGTAAATGAAACGGTAACAAACGCACCATCATCGGCCTCCACATCATCATCTTCACAAAACCCTGTAAACATTGGTGACAAACTCAAAGTCTACTATGGTCCGACGCACGAATCCAAAGTGACGTACGAGGCGAAAGTGATCGATTGTGACAACGAACCAACGCCGAACACGGCCTATTTGGTGCATTATACAGGGTGGAATACCAGGTATGACGAGTGGATTACACTTGGTAGGATCGCGGAGAATCTCAGTGCGACGACGAAGGCGAAACGGCTGAAACAGGGTAGTTTGGGCGGATTGAAGGGCAACAAACCCGTGCCCGGAAAGAGAGGTAGGGGGATGTCTATTACTGGTCGGAGCACGATTCCCGATGTGCCGAGATCTTCGACTCCTTCGAGCGTGACGTCTTCATCAAGTCGGACGAAAAGTCCGGCCACACCGGCTTCAAGGAGCGGGAATCGATCAACTAGACAAGGCGATACAATAAATCGCCGGACGAGGAGGACTTCAGCCCAAACAGACGTATCAATCCATTCTGAATCGGAGTCTGACGAGCAGTCAGAGAGTGACACAGAACTGACGAGAACGAGGAGCGGGAGCAAGACTGAGGAAACAGAGCCGAAGACTTACAGGAGGAAATTAGTAAAAACTgggaaggatacgtggggacacttggcggaggaatgtgagggggtgaaagaggagtggctgggagcgaaagggaatagaagggtagtggagtggatgagagaggatgggatcggggtAAGAACGTTGGAAAAGCTGGGGAGGGAGAGGGAAAAGAGAAGGGAGGGTAAGAGGGATACGGGAATGGAGTAA
- Protein Sequence
- MQGDDPPYLSVGTAVSAKYKGAFCEAKVSKVVRIVKCKVTYKMGLGTATVNDEQVKGPLRVGQLVQAKHPDRKEFIDANITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFNESETLDQLPLTHPEHFGNPVMGGRRGRRSRQLKEDSSEGEVEEENEPDLEQYSVDTGKVVSVEASDKKRSKDNWFPGLIVMPSAQPTVRINVKDEFLVRSFKDGRYYTVPKKEVNEFKREMGARVESSTLSEAVDKAIKFLDNDELPVHWERNSLFNVQSQYSDSDENFSDSSDDEPTEEKDHFVAQLYKFMDDSGTPLNKTPMISNKDVDFYRLFRLVHKLGGYNRVTNQSKWKTIAIRLKFSQSQNTYNQVKQVYKKCLLSYESFYRTLGCTMLNHTRNAKKNRGRNLIRDKDRVTPVQSPRPERDEEELKKDEEKEKEKEKDVKDKDKKKKVLEEDKKEKESSESSSELTDHSSEQQPSTSKEIFKTKKVVEAKVKEKKRTPSVTEKLKVEETKKEKEKEDEKEKEKDKEKEKDKSSMQQTRSKSNIFKTKEIVSPESVVRETKTPVKETQPKIVTKSLSKKVVEDDKEKDKKRGRKRINTDDKTSNSDSSVNETVTNAPSSASTSSSSQNPVNIGDKLKVYYGPTHESKVTYEAKVIDCDNEPTPNTAYLVHYTGWNTRYDEWITLGRIAENLSATTKAKRLKQGSLGGLKGNKPVPGKRGRGMSITGRSTIPDVPRSSTPSSVTSSSSRTKSPATPASRSGNRSTRQGDTINRRTRRTSAQTDVSIHSESESDEQSESDTELTRTRSGSKTEETEPKTYRRKLVKTGKDTWGHLAEECEGVKEEWLGAKGNRRVVEWMREDGIGVRTLEKLGREREKRREGKRDTGME
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -