Basic Information

Insect: Philonicus albiceps
Gene Symbol: -
Assembly: GCA_963969385.1
Location: OZ017772.1:721438-724497[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00032 0.046 15.0 0.2 2 23 199 220 198 220 0.97

2 11 0.0076 1.1 10.7 2.8 1 23 294 317 294 317 0.95

3 11 0.00097 0.14 13.5 3.8 1 21 324 344 324 345 0.96

4 11 0.26 38 5.8 3.5 2 23 355 376 354 377 0.93

5 11 9.1e-07 0.00013 23.0 3.6 1 23 395 417 395 417 0.98

6 11 6.1e-07 8.8e-05 23.6 4.3 1 23 424 446 424 446 0.98

7 11 4.5e-08 6.4e-06 27.1 1.7 3 23 460 480 458 480 0.96

8 11 1.1e-05 0.0016 19.6 2.8 1 23 486 508 486 508 0.99

9 11 4.4e-07 6.4e-05 24.0 2.1 3 23 516 536 514 536 0.97

10 11 7.3e-08 1.1e-05 26.5 1.6 1 23 542 564 542 564 0.99

11 11 0.00036 0.051 14.9 0.3 1 22 570 591 570 594 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00032	0.046	15.0	0.2	2	23	199	220	198	220	0.97
2	11	0.0076	1.1	10.7	2.8	1	23	294	317	294	317	0.95
3	11	0.00097	0.14	13.5	3.8	1	21	324	344	324	345	0.96
4	11	0.26	38	5.8	3.5	2	23	355	376	354	377	0.93
5	11	9.1e-07	0.00013	23.0	3.6	1	23	395	417	395	417	0.98
6	11	6.1e-07	8.8e-05	23.6	4.3	1	23	424	446	424	446	0.98
7	11	4.5e-08	6.4e-06	27.1	1.7	3	23	460	480	458	480	0.96
8	11	1.1e-05	0.0016	19.6	2.8	1	23	486	508	486	508	0.99
9	11	4.4e-07	6.4e-05	24.0	2.1	3	23	516	536	514	536	0.97
10	11	7.3e-08	1.1e-05	26.5	1.6	1	23	542	564	542	564	0.99
11	11	0.00036	0.051	14.9	0.3	1	22	570	591	570	594	0.92

Sequence Information

Coding Sequence: ATGGCTTTTACCCAATTGCAGATTCAAGAAAATGATGACCTTCCAAGGGGATTGTGTGGTGATTGTACTaaccaaattataaatgcttataattttaaagctaaagcGGAACAAAGCGAGAAAGTCCTCTATAAttatattggaaataaaaaaataaaacctaccCCTGATATATCACATAACGACTTAAATGATCAAATCTCTATAAAGCAAGAATCTGAAGTTGTTGCAGAAATTCTAGCCAACGACActgaacaaataataaaagatgaaaaacaTCAACCGGAGGATGAGAGCTCGATTACATTTGAAACTGATCAAGGTGAATCTGAGGCCGAAGTTAACGATTGTAAAAAGACTTTGACCCCCGAAGATTTGTTGCTGGCTTCTGAAGAAGAACAATCCAAAGAAAAAATCGTGAACAGAACGGAATGCACAGAAATATCTGAACCAAAGGTGCAACTTACATTGAACCGTACAGGAATGCTTACTAATTTAAGaaagcGGAAAAAGGCGCATTTAGGGTCCACAAACATGTCGGGACTTCCTGATGGTGATGAAAGTTTGTGCCTACCAAGTGGagttaaaacaattcaatgcaaaatttgcGGTTCACTTTTCCCAAAGATAGGTAATCTAAAGGTTCACTTAAAAACTCATAAATCGTTGGATGATATCGATTTTGAAGCCATGAAAGCGCAATCTGCGAcgaatgatgatgatgttagaaattttatgacaAAAATGGCATTAGCCTTagagaaaaaacaattatcgATGTTTTATTCTATTGTTAATGAAATAGGAAATGAACTCAATTTAAGTGATACAGAAACTGAATCTGAAACAGATGACCTTAATATAGAATGTCGTCGCATTCACAACTGTGAAATTTGCAATGAAACATTTGATCGAAGGTATAAAGCTATGTACCATCAAAAATACTTGCATTCGTATGAAGAATTATCGCATCAGTGCAGACACTGtctaaaaaagtttatatctCAAGGTTTACTTAAACACCATCTTAGAGAACAGTGCGAAaacactgaaaaattattaaagtgtaACGAATGCAATAAGAGGTATATGTGGCATGAAAATCTGTTACTACACTCCAAAATTCATCACTCTTCTGCGGTTGTAAGAGTGAAGAAAAAGGAGTTACCTAGAGAGAAGAGTTTCACATGTAAAATATGCGATAAATCGTTTTATAGGCAAGAGCACCTAGACCGTCATACCAACATTCATCAGCctgatgagaaaaaattcgAGTGCCCGACTTGccataagaaatttaatcgTAAGGACAACATGAAATCGCATATGAAAATCCATAGGGAGGACAGGGAAAAGGATGATTCCGACAAACACCTCTGTGTATATTGTGGTCGAAGTTTTTCTAATTcttctaatttaattgttcATATGAGACGGCATACAGGCGAAAAGCCATATAAATGCGACTTGTGTGATAAGGGATTTCCAAGATCTTCTGATCTGCAGTGCCACAGAAGAACTCATACTGGAGAAAAGCCATGCTTATGTACTATTTGTGGAAAagGATTCTCGCGGTCTAATAAGCTTGCTAGGCACATGAGAATCCACACAGGCGTAAGACCTTATAAATGTACATATTGCGATCGAGCCTTTACTCAATCAAATGACCTCACGCTTCATATAAGGCGACACACAGGCGATAAACCGTATGTTTGTGGAATTTGCGGCGAACGTTTTATTCAAGGTACCGCCTTACACACCCATCAGCGGCTAAAGGGACACTTTGAGGAAGACTCCCAAGAAGCACCTTACTCCAGTATTAGTGTCAATAATCCCAATAGGGCTAATTTTGCTAGTAGAGTAGATCGAATCGgtattccaaaaaattcaaattcccaAGAACCTGTGGAAATAAAGCCTGTAGGCAAAGGAAACACTTTGGTAACTTTGGATAAAGATGCACAGATTGATAGAAATGACAAAATCCTTGACGAAAGTACTAATAACGTACCTGCAATTAGTGCAACACCTAATCAAACAATAgagaacatttcaaattttgtgcaATCAAAAGTTCCGTATAATCAGCATAGTGCCTTCATAACTTCTTCCAATGTGCCGTTCATTCAGCTGGAGGATGGAGACTTTTTTACAATACCTAACCTTGGATCGTATCACTGA
Protein Sequence: MAFTQLQIQENDDLPRGLCGDCTNQIINAYNFKAKAEQSEKVLYNYIGNKKIKPTPDISHNDLNDQISIKQESEVVAEILANDTEQIIKDEKHQPEDESSITFETDQGESEAEVNDCKKTLTPEDLLLASEEEQSKEKIVNRTECTEISEPKVQLTLNRTGMLTNLRKRKKAHLGSTNMSGLPDGDESLCLPSGVKTIQCKICGSLFPKIGNLKVHLKTHKSLDDIDFEAMKAQSATNDDDVRNFMTKMALALEKKQLSMFYSIVNEIGNELNLSDTETESETDDLNIECRRIHNCEICNETFDRRYKAMYHQKYLHSYEELSHQCRHCLKKFISQGLLKHHLREQCENTEKLLKCNECNKRYMWHENLLLHSKIHHSSAVVRVKKKELPREKSFTCKICDKSFYRQEHLDRHTNIHQPDEKKFECPTCHKKFNRKDNMKSHMKIHREDREKDDSDKHLCVYCGRSFSNSSNLIVHMRRHTGEKPYKCDLCDKGFPRSSDLQCHRRTHTGEKPCLCTICGKGFSRSNKLARHMRIHTGVRPYKCTYCDRAFTQSNDLTLHIRRHTGDKPYVCGICGERFIQGTALHTHQRLKGHFEEDSQEAPYSSISVNNPNRANFASRVDRIGIPKNSNSQEPVEIKPVGKGNTLVTLDKDAQIDRNDKILDESTNNVPAISATPNQTIENISNFVQSKVPYNQHSAFITSSNVPFIQLEDGDFFTIPNLGSYH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00717975;
90% Identity: -
80% Identity: -