Palb006167.1
Basic Information
- Insect
- Philonicus albiceps
- Gene Symbol
- -
- Assembly
- GCA_963969385.1
- Location
- OZ017772.1:42355586-42356392[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-10 2.9e-07 30.9 0.1 3 43 17 58 15 60 0.90 2 2 5 6.8e+03 -2.3 0.0 25 32 233 240 232 245 0.81
Sequence Information
- Coding Sequence
- ATGGTgaagaattataaaagaaagacGGAGAGAGGGAGTTGGAATAAAGAAACTATGAAAAATGCAGTAAATATGGTCATTGAAGGGAAAATGGGGTATAAAGTAgcatcaaaaacattttctgtgcCACAAACTACCCTGGAAAGGAAAGTAAAAGCAGCTCGTGAAGCCCTAAAACATCCTGCTGCTCCTGCATCAATTAAAGTACCTTTAGACCCAAAAAAGCGAATATTTTCAGAAGAGAGCGAACTTTGCaactatattttgaatatggaaAGTCGTCTTTATGGACTTACAACAAAAGATTTAAGGGTGTTGGCATACACTTTGGCAGTTAAAAATGGCAAGAAACATATGTTTAACTGTGACAAAGGAGAAGCTGCCAAAGATTGGCTTCAGGGATTTTTGAGCAGGCACCCAGAACTATCGATAAGAAAACCAGAAAGCACTTCAGCTGCACGTGCCGCTGGGTTTAATAAGCAGGCTGTTGAACAGTTTTTTAACTTCCTTGGTAATGTTTATGATGAACATAAACTTTCACCGGACAGAATTTACAATTGTGACGAAACAGGAATTTCAGTGGTGCCTAAAACGagatcaaaaataattgcacGAAAAGGCAGAAAACAAGTGGGATCCATTACTTCTGCGGATAGAGGTATGTACAGGCATCCCTCGAATAGCACGATACTTGAATTGCACGAAATCTCGAATAGCACGGTTAAAAATTGCGACAACCCTCGAATAACACGGAGTTCGAATTACACGAAGTCGCATAAAGTAGTGAGTGCTTACTGGTCCATGTGA
- Protein Sequence
- MVKNYKRKTERGSWNKETMKNAVNMVIEGKMGYKVASKTFSVPQTTLERKVKAAREALKHPAAPASIKVPLDPKKRIFSEESELCNYILNMESRLYGLTTKDLRVLAYTLAVKNGKKHMFNCDKGEAAKDWLQGFLSRHPELSIRKPESTSAARAAGFNKQAVEQFFNFLGNVYDEHKLSPDRIYNCDETGISVVPKTRSKIIARKGRKQVGSITSADRGMYRHPSNSTILELHEISNSTVKNCDNPRITRSSNYTKSHKVVSAYWSM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -