Basic Information

Gene Symbol
ct
Assembly
GCA_963969385.1
Location
OZ017774.1:43437759-43440925[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.9e-32 4.8e-28 97.8 0.0 3 77 348 423 346 425 0.96
2 2 8.5e-31 7e-27 94.1 0.0 3 76 546 620 544 623 0.96

Sequence Information

Coding Sequence
ATGCCACAGTACGGTCGCAATGAAGACCCAATGAGCGAGGATCGCATTGCCCACATTTTGTCAGAAGCCTCGAACCTCATGAAGACCCCCCAAAGTCAAGGTCTACACCaccaacagcaacagcagcagcaacaggtccaacagcaacagcaacaacacaTGCAACAGGCTGCTCAACACCTGCAAAACAGTCAACAGCAATCCTCCGGATGCCAAGAGGACACCCACAGTAACGAGGACTCAAAGTCGCCGCATAATCAGTCCCCGTCCCCCTTCTACAAAGAAGCCCTACAGCGGAGGTTGAAGGGCGACGAAATGTCCCAAGACAAGGTCGCCAGAATATACCAAGAGGAGTTAGCGAAACTCATGTCGCGGACGCCCAGAGACGCCTTCCCAAGTTTTCTCTTTCCACACTTTTTCAGTGGTGGCATGCCACCGGCAGCAGCAGCCGCAGCAACAGCCGCAGCAGCCGCGAATCAAATGCCAGACGAAAATATTCGGATGGCCCTGGAAGCATACCATAGGGAGCTGGCCAAATTGCAACAAACCGGCGGAGCCCTtccaaattttccaaatctcCCCGGTCTGCTAGCCCTTCAGCAGCAGGCTCTGAATGGGGCCCAAGATTTATCCGTGCCAAAGGAGAAATCTATGAAGGTTAATGGCCAGCAGCAGAACCCGTCTGGCGGTATGGACCACAACGACCAAAATGCCAAAGACAATTCGACTTCCAACGAGGATGCCCTGCGCCACTCGAGCGCCTTCAGCTTAGTCCGCCCGAAGCAGGAGCCCGGAACTCCGGTGACCAGTAACGCGAGCACAAACTCAACGGCGACTGCAAGTCCCCTGGGGAACTCGATCCTACCGCCTGCAATGACGCCAAACGACGACTTCTCGGCGGCTGCAAGTCCGCTGCAGAGGATGGCATCGATCACGAATTCCTTGATCACTCAGCCACCCGTGACCCCTCATCATTCAACCCCTCAAAGACCCATGAAAGCAGTGCTGCCACCTATCACCCAACAACAGTTCGATATGTTCAACAACCTCAACACCGAGGAAATAGTCCGCAGGGTGAAGGAGGCTCTTTCGCAGTATTCGATCAGTCAAAGACTCTTTGGTGAGTCTGTTCTTGGTCTATCGCAGGGATCAGTCTCAGACCTTCTGGCCCGACCCAAGCCATGGCATATGCTGACCCAAAAAGGTCGGGAGCCTTTCATCAGAATGAAAATGTTCTTGGAAGACGAAAACGCGGTACATAAGCTAGTTGCCAGCCAGTATAAAATTGCCCCCGAGAAGCTAATGCGGACCGGGAATTACAGTGGAAGCCCTCAAATCCCAGCAGGACTGAACAACAAAATGGTCCCTATGCAAAAGATGATGAACGATCTAAAAATGGAACCCCAGCACCTCATGCAAATGCAAGCAGCTGCAGCCATGAACCATATTCCAACGTCACAGCACCAGCAAGGGATGCTGCTGACACCCCCGGGCCTCCCACCCCACCACGCCATTAACTTGCCTTCGAACGAAAAGAAACCGATGCTGATGCCGATGCACTCGCCGCAGCAGAACAATGCAATGCGAAACATGCATCATATGTCCCCGACCGTCTACGAGATGGCAGCACTAACCCACGACCTCGACACCCAGGTCataacaactaaaattaagGAGGCCCTTCTGGCGAACAATATCGGCCAGAAGATCTTCGGAGAGGCTGTGCTGGGACTGTCGCAAGGGTCTGTCTCAGAACTTTTGTCGAAGCCGAAACCCTGGCACATGCTCAGTATTAAAGGTCGGGAACCCTTCATCAGAATGCAGCTGTGGCTGTCTGACGCGAATAACGTTGAAAGGCTACAAGCCCTTAAGAATGAGAGGCGCGAGGCCAGCAAGAGGAGGCGCTCAACGGGGCCTGGTACCCAAGACAACAGCTCAGATACAAGCAGCAATGACACCGCTGACTTCTACGCGAGCAGTCCTGGTCCAGGATCTGTGGGATCAGCTGGAGCCCCGCCCAACAAAAAGCAGCGCGTCCTTTTCTCAGAGGAGCAGAAAGAAGCCCTACGATTAGCCTTTGCCCTGGACCCTTACCCGAATGTAGCGACCATTGAATTCCTTGCGAGTGAACTGGGGCTAGCGACCAGGACGATAACAAATTGGTTCCACAACCACCGTATGCGGTTGAAGCAGCAAGTGCCCCACGGAGCTCCGAATGAGCCGGTACCCAGCCGGGAGAATCAGTCCGGGACTCCATTCGACCCTGTCCAGTTCAGAATTCTCCTCAATCAGAGGTTAATGGAACTTCAGAAGGAGCGGATGGGTCTAAGTGGGGTACCTCTCCCCTACCCACCGTACTTCGCCGCCAATCCGAACCTCGCGGCCCTCATTGGGCGTGGTCTCCTGCCAACTGGTGAGCCTGATCTGGCAGCACTGAACAATGCATTTAAGGAGCAAATGAGTGGGCTGGACCTGTCCATGAGTTCCTTGAAACGGGAGAGGGAGGAAGAGTTTGAAGACGTCGACGGGGAGGGGGACAGTCACGTCTCAGACTCTGAGTCTGTAGACGGTGGCGACATGAAACCTGAACTCAAGGAGACCCCAACGTCCATTCCTTCCGTGTCGAGAATATCCCGACGGAAACCTGTCGCACCCCAGTGGGTTAATCCTGACTGGCAAGATAATCTAAAGGGCGCTGCTGCAGGTCCCCCAAGTGGACCCATCGCGGGGGCTGTTGGCGGCACCGACCAGGAGGTGATAATAAACGGGGTCTGTGTGATGCAGCAACAGGCTGCCGACTACAGCCGAAAGGCGGGTAGCGAAGAAACCGTCCGAATTGAACCTGCAGCGGTCCAGGATCGCTTCCAGGATGATCCTGACGACGATGTGACGTCAGACAATGAGGATGATGATGCCCGAGGGGACACCGAATCGCAAATGTCGAACAAACACTCCGACTGTGGAGAGACGAACGAGAATGACGACAACGACGTAGACGGTGATGTCAGCGTAAAACAGGAGGACTGCGAAAGTACCGGCCGAAGAAGCGCTCATGAAATCTCCGACACCACCAAAGCGGACGATGATGAAACCCCAGGAGTGTGGAACTACTGA
Protein Sequence
MPQYGRNEDPMSEDRIAHILSEASNLMKTPQSQGLHHQQQQQQQQVQQQQQQHMQQAAQHLQNSQQQSSGCQEDTHSNEDSKSPHNQSPSPFYKEALQRRLKGDEMSQDKVARIYQEELAKLMSRTPRDAFPSFLFPHFFSGGMPPAAAAAATAAAAANQMPDENIRMALEAYHRELAKLQQTGGALPNFPNLPGLLALQQQALNGAQDLSVPKEKSMKVNGQQQNPSGGMDHNDQNAKDNSTSNEDALRHSSAFSLVRPKQEPGTPVTSNASTNSTATASPLGNSILPPAMTPNDDFSAAASPLQRMASITNSLITQPPVTPHHSTPQRPMKAVLPPITQQQFDMFNNLNTEEIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGNYSGSPQIPAGLNNKMVPMQKMMNDLKMEPQHLMQMQAAAAMNHIPTSQHQQGMLLTPPGLPPHHAINLPSNEKKPMLMPMHSPQQNNAMRNMHHMSPTVYEMAALTHDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQALKNERREASKRRRSTGPGTQDNSSDTSSNDTADFYASSPGPGSVGSAGAPPNKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLASELGLATRTITNWFHNHRMRLKQQVPHGAPNEPVPSRENQSGTPFDPVQFRILLNQRLMELQKERMGLSGVPLPYPPYFAANPNLAALIGRGLLPTGEPDLAALNNAFKEQMSGLDLSMSSLKREREEEFEDVDGEGDSHVSDSESVDGGDMKPELKETPTSIPSVSRISRRKPVAPQWVNPDWQDNLKGAAAGPPSGPIAGAVGGTDQEVIINGVCVMQQQAADYSRKAGSEETVRIEPAAVQDRFQDDPDDDVTSDNEDDDARGDTESQMSNKHSDCGETNENDDNDVDGDVSVKQEDCESTGRRSAHEISDTTKADDDETPGVWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01431718;
90% Identity
iTF_01049440;
80% Identity
iTF_01183709;