Ptra027533.1
Basic Information
- Insect
- Philereme transversata
- Gene Symbol
- nfxl1_1
- Assembly
- GCA_963924445.1
- Location
- OZ004351.1:10515935-10518406[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 2 3.9e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 18 0.014 2.8e+02 2.7 0.7 4 10 169 175 168 175 0.97 3 18 3.1e-07 0.0061 17.7 15.9 3 19 186 202 185 202 0.95 4 18 5.1e-08 0.00099 20.2 13.0 3 19 239 255 237 255 0.91 5 18 2 3.9e+04 -4.7 1.3 6 10 280 284 280 284 0.91 6 18 1.9e-08 0.00037 21.5 13.5 1 19 290 308 290 308 0.99 7 18 9.6e-05 1.9 9.7 19.8 3 19 345 361 337 361 0.86 8 18 2 3.9e+04 -5.3 2.2 5 10 384 389 384 389 0.88 9 18 8.4e-06 0.16 13.1 18.7 1 18 395 412 395 413 0.97 10 18 1.3e-09 2.5e-05 25.2 14.1 1 19 422 440 422 440 0.99 11 18 0.0002 4 8.6 6.4 9 19 488 498 486 498 0.89 12 18 0.0044 86 4.4 8.1 1 12 508 518 508 518 0.96 13 18 0.31 6e+03 -1.5 3.3 14 19 547 552 547 552 0.85 14 18 0.22 4.2e+03 -1.0 0.3 8 12 568 572 567 579 0.79 15 18 2.4e-05 0.48 11.6 4.8 1 11 588 598 588 599 0.97 16 18 1.6 3e+04 -3.8 1.7 15 18 613 616 613 617 0.87 17 18 5.5e-05 1.1 10.5 13.3 1 18 628 645 628 646 0.88 18 18 1.9e-06 0.037 15.1 13.2 1 18 687 705 687 706 0.89
Sequence Information
- Coding Sequence
- ATGGCGCGGCGGTACAAAGACGCAGCCGCGAAATTGCAGCAAAACGTGCAAAAACATCTCAAGGATATGAAAGACCTCTCGTCCTCTGAAGATGAAGAGCCTTACGAGTCCAGCGTCATCGAGGGGATGTTCCAGAGCTACTGGCGAGGAGGTGGGGACACCAAGATGCTGAATAGAACCAAGAATCTTCTAGAAGAAGCGATCAGCGGGCGGTCTGTTGCTTGCCTGATTTGCATCAGTTCTATAAAGCGGAACCATGCCATCTGGACGTGCGATCACTGCTATTCATACTTCCATCTATCCTGTATTCAGAAATGGGGCAATGATAGTATTAGTTTGCGCAGTATCGAACCACAAGCGCCGATAAGTGTTTATAAGCCATTGAAAATTGAATGGTGCTGCCCAAAATGTCGTAATTCGTACACCAAAGAAGAAATACCGAGGAAGTACAGATGTTTCTGTGGTAAGACTGATAATCCACCTGTCCACCCGTGGTTGATACCTCATACTTGCGGAGAGGTGTGTGAAAAAAGGCTATCTACTGGAGACAACTGTAAACACAAATGTCTACTACTATGCCATCCTGGACCATGCCCTCCTTGTCCTCAAACAGTCAATGGAATATGCTACTGTCAAAAGGAGCGAAAGAAAGTTCGATGTAGTGCAGCAAAGTGGTCTTGTGGTCAACAATGTAAAAAAACCTTACTCTGCCAAACACATAAGTGTGAGCTTCTATGCCATGATGGAGAATGCCCACCTTGCACCTACACAAGCATCCAACCGTGCCAATGTGGAGCTGACAAGACCAAAAGACCCTGTGATGATCCATTCTGGCACTGCAAGAAGACTTGCAACAAACCATTCTCATGTGGCTATCATAGATGTGAGAAAGTGTGTCATTCTGGTGGCTGTGAAGAATGCCCCAATTCCGGCATGAGATCCTGCCCTTGTGGAGCCAATCAGCACTATGTACAGTGTCCCGATATCATGGAAGCTTGTCTTGGAACCTGTGGGAAAAAGCATGAAGATTGTGAGCATAGCTGCCCAGAGAAATGTCATAAAGGCGGCTGCCCACCTTGCCAAGTCCTAATACAAAAGAAATGCCAATGTTCGACTCATGCCAGATCCCTACCCTGCAGTAAAGAGTTCAAATGTGAGACTAAATGCAGAGGCATCAGACCTTGTGGAAAACATGGCTGTGCAAAAAAATGCTGTAATGGAAACTGCCCACCATGTGAGAAGGCTTGCGACAAACCATTACAATGTGGCCGCCATAAGTGCACCACCATCTGCCATCGAGGTCCGTGCTACCCCTGTCCATTGGAATCTAAAATAACTTGTAAATGTAAGGAGACATACGTTACTGTGCCGTGTGGTAGAGAACGGTTCACAAAACCACCAAAATGTAGCCTCCAATGCAAAGTTAAATACAAGTGTGGACATGTTGAAGAAAATAAGCATTCCTGCCACTTTGGAGACTGCCCTCCATGTAAAGCCATCTGCTACAAAACCTACCCAAACTGTGGTCACGAATGCAAAACAATATGCCATGAATTTAAAGCTGTAGTCTTTAAACAGATTGAAAAACCTGCTACACCATGGGAAGTACAACCACCAAAGACTAAGATCATGACATTAGAATGTCCTCCATGTACCATGCCCATCTCGGTCATCTGCTTCGGCGAGCATGAGACAGACAACCAGCCCTGTCATACAGCGGCTCGGAGACCATGTGGCAGAGAATGTGGAAAATCTTTGGCTTGCGGAAACCACAGCTGCAATCTGATTTGCCATTTGTATAGCCCTGATCCTAGCTACCAAAACGTGCCATACATTTGCAAACCTTGTAACAGAGAGTGTGTAAAACCCCGTCCAGAAAAATGCTCACATAAGTGTTCAATCAGAGCTTGTCATCCAGGACCTTGCCGTCCATGTGAGGTACTGGAACGAATCTCATGCCACTGTGGTGTCACCGAGCTATACTTAAGGTGTAGGGAGTACAGCTCAGCGACAGAAGAAATGCTATCATGCAAACAGCAATGCCCAAAGAACTTGGAATGTGGTCACCGGTGCAAAAACCCCTGCCATTCCGGTGCTTGTGGCAATCAAGTGTGTACTAAGAAAACTAAGATACATTGTCCTTGCggcaacataaaaaaagacgCTCCTTGTAACTCAATCAAAAGTGGTGAGGGTAAAGTAGAATGCAATGAGAGCTGTGAAGTCAAAAAAGCAGCAACAAAACTGGAGAGTGAGAAAGAACAACAGAGATTAAAGCAGTTAGAAGAGGAAAGAAACAAAAAAGAACTGGCTGAATATGAGTGGAAACTCAGCGGAAAAAAGAAGAAATATAAAGAAAAGAAGGTTGTGGTTAATAAGGATGAAAGGAACTGGGTACAACGATACTGGATGCCGATCCtgtcattatttattgtaattctgGCAGCATCatactatatattttatttgtag
- Protein Sequence
- MARRYKDAAAKLQQNVQKHLKDMKDLSSSEDEEPYESSVIEGMFQSYWRGGGDTKMLNRTKNLLEEAISGRSVACLICISSIKRNHAIWTCDHCYSYFHLSCIQKWGNDSISLRSIEPQAPISVYKPLKIEWCCPKCRNSYTKEEIPRKYRCFCGKTDNPPVHPWLIPHTCGEVCEKRLSTGDNCKHKCLLLCHPGPCPPCPQTVNGICYCQKERKKVRCSAAKWSCGQQCKKTLLCQTHKCELLCHDGECPPCTYTSIQPCQCGADKTKRPCDDPFWHCKKTCNKPFSCGYHRCEKVCHSGGCEECPNSGMRSCPCGANQHYVQCPDIMEACLGTCGKKHEDCEHSCPEKCHKGGCPPCQVLIQKKCQCSTHARSLPCSKEFKCETKCRGIRPCGKHGCAKKCCNGNCPPCEKACDKPLQCGRHKCTTICHRGPCYPCPLESKITCKCKETYVTVPCGRERFTKPPKCSLQCKVKYKCGHVEENKHSCHFGDCPPCKAICYKTYPNCGHECKTICHEFKAVVFKQIEKPATPWEVQPPKTKIMTLECPPCTMPISVICFGEHETDNQPCHTAARRPCGRECGKSLACGNHSCNLICHLYSPDPSYQNVPYICKPCNRECVKPRPEKCSHKCSIRACHPGPCRPCEVLERISCHCGVTELYLRCREYSSATEEMLSCKQQCPKNLECGHRCKNPCHSGACGNQVCTKKTKIHCPCGNIKKDAPCNSIKSGEGKVECNESCEVKKAATKLESEKEQQRLKQLEEERNKKELAEYEWKLSGKKKKYKEKKVVVNKDERNWVQRYWMPILSLFIVILAASYYIFYL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00857272;
- 90% Identity
- -
- 80% Identity
- -