Basic Information

Insect: Philereme transversata
Gene Symbol: -
Assembly: GCA_963924445.1
Location: OZ004342.1:32445114-32466290[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.17 16 7.2 1.2 1 23 354 376 354 376 0.95

2 12 0.17 16 7.2 1.2 1 23 413 435 413 435 0.95

3 12 0.00051 0.05 15.1 2.5 1 23 441 464 441 464 0.96

4 12 9.6 9.5e+02 1.7 0.2 1 11 468 478 468 490 0.73

5 12 0.00067 0.066 14.8 0.8 1 23 495 517 495 517 0.99

6 12 0.0092 0.9 11.2 0.3 3 23 522 543 520 543 0.94

7 12 0.013 1.3 10.7 1.8 2 23 556 578 555 582 0.94

8 12 0.17 17 7.2 0.0 1 21 584 606 584 610 0.92

9 12 0.0031 0.31 12.7 3.7 3 23 690 710 689 710 0.99

10 12 0.016 1.5 10.5 0.8 1 23 716 738 716 738 0.96

11 12 0.00066 0.065 14.8 4.1 1 23 743 765 743 765 0.99

12 12 0.00077 0.075 14.6 1.2 1 23 771 794 771 794 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.17	16	7.2	1.2	1	23	354	376	354	376	0.95
2	12	0.17	16	7.2	1.2	1	23	413	435	413	435	0.95
3	12	0.00051	0.05	15.1	2.5	1	23	441	464	441	464	0.96
4	12	9.6	9.5e+02	1.7	0.2	1	11	468	478	468	490	0.73
5	12	0.00067	0.066	14.8	0.8	1	23	495	517	495	517	0.99
6	12	0.0092	0.9	11.2	0.3	3	23	522	543	520	543	0.94
7	12	0.013	1.3	10.7	1.8	2	23	556	578	555	582	0.94
8	12	0.17	17	7.2	0.0	1	21	584	606	584	610	0.92
9	12	0.0031	0.31	12.7	3.7	3	23	690	710	689	710	0.99
10	12	0.016	1.5	10.5	0.8	1	23	716	738	716	738	0.96
11	12	0.00066	0.065	14.8	4.1	1	23	743	765	743	765	0.99
12	12	0.00077	0.075	14.6	1.2	1	23	771	794	771	794	0.96

Sequence Information

Coding Sequence: ATGACAAAAACACTGTGTCGAATATGCTTGCGCACGGATTTTGATGATGCTGGAGATATTGACGAGAGGCTCACCGATTTTCATGATGAATTGTGTGATTATGATGTAAAACTTGATTCCCTTCATGAGCTAATACCACATAATTTAGCATTCGGGACATTAGACAACCAAAAATTCTACACTTATTATAACGATCGTTTTCCAGACAATATAATCCATAGTACAATTCACACCAATACGACATTCACACATACAGATGTGAAACCAAGTGACAAAGTAAAATTAGAGGCAGCTGAAACTGAGTCAGTTGAGACTCAGACCGAAGCTGAAATTGAAGATCCTATATTAATCACAGAAATAAAAGAAGACTCTGAACAAGATCTAATACCTGAAGAAGTGTTATTAAGCGTAAACCAAGAAGTACAGAATGGTTTTATCCAAGATGATGTATTACCAAATAAAGAAGAAGATCTTGACAATATAGATTTTATTGATGATGTAATACCAAATGATGATCTTGACAAAGACGATAACATGGAAAAAGAAATAGATAAAGTTAATAATGTGATAGATTCAGACAGTGATTCAGAAGAGAAACCAAAGCCGAAAAGAGTTTATAGAAAAAGAAAGACAAAGGAAACTAAATCAGATACTGTCAATGATATAATAAGTGTAGAGGAGttaaaatacattacaaaaGATTTGAATATAGAtgagaaaaaagtttttaaattgaataagaaaataataaaatttaaagatAGAGTGTCGTGGTTGCTAGATAACAGGAAAATAGATCTAGGTGAGAATGTTAATCTAGATAAGGAGACTTTTTTGAAGATGTTTGAAAAATGCGACAAATCTCCACTATGGAATCGTGGCGTACTTAAAAATAGCCCCGGAGGTATACAGAAGCTAAAGAAGTTCCTCCTGTTCTTACTGAAGCGGTACAACCCCGAGTACGAGAGCGTGTTCGACATCGAGTACCTCACGACGCGCGACGCCAAGCTGGCGGAGTTCCACGCGCGCCGGCGCAGCGCGGAGTACGCGCGCGCGCGGCACAGGTGCGACACGTGCTACAGAGCGTTCGAGTTGCCGAGTCTGCTGGACTACCATAACAAATGGCATGATTATTGTCACGAGCTGGGGTTCCACATCGAGTACCTCACGACGCGCGCCGCCAAGCTGGCGGAGTTCCACGCGCGCCGGCGCAGCGCGGAGTACGCGCGCGCGCGGCACAGGTGCGACACGTGCTACAGAGCGTTCGAGTTGCCGAGTCTGCTGGACTACCATAACAAATGGCATGATACGAGTCGTCCGCACGCGTGCGATATCTGCGGCATGCGGTTCTCCGCGCGGAAGCACCTGATGGTGCACAACCGCACCAGCCACTACTCCGTCTACCGCTGCAAGCTGTGCCCTATCGTCACTAACATCTATAACGTGATGGTGAACCATTACGACCAGCACAAAGGCATGCAGTACAAGTGCGATGTTTGTCTCGGCGAATACAGCAGTAAAAGCAGTTTGAACACACATAGATTGACGCACGCGACGCTCGCCTGCGCACGCTGCGCGCGCCGCTTCACATCCGAGGTCGGACTCGAAAACCATATGAAATATAAACACTCAGAGGTGGAATCATCCGAGTGCTCGAAGGTCGTCACGTGCGAGAAATGTAACATCGACTTCGAATCGCGTAAAGACCTTTCCAAGCACTCGAAGTTAATACATCAGAGAACGCACATTTACAAATGCCTGTACGTGGGTTGCGTGGAGCGCTTCGAGACGGCGCCGGAGCTGCGTGCGCATACGCTGGCGAGCGGACACGTGCGGCGTGGTGCGCCCGCGCGTCGGGGGCTGCACGGCGGCGCAAAGGCGCGGGGGGAGGCAGCACTGGCGCCCCGGGAGCCGCACGTCGCCATTATGGGACCCGATAAGCCTTTCCGGACCTGTCCTATTTGCCAGGAACAAGTCCCGAACAAGTGCCCCACATCGCTGTACAAGCACCACATCGCGCAGCACCCCACGCAGCCCTATCGCTCCGCGGTGACGCACGACACGCTGTGCGAACACTGCGGGAAGTCATTTTTTcACATTTCAGTGTACCGCGACCACCTCAACACTCACACGGGGGCGAAGCCCTACGCGTGCCAGGACTGCGGCGTGCGCTTCCACATGCGCAGGTCGCTAGCCATACACAGcGAGCGTCACCGCCCGCCGAGATATCAATGCAAGGATTGCGGCAAGATGTTCCTCACCTCAGCGAACCTCTTCTGTCATAGACGGACGCACATCGGCGACCGTCGCTTCAAGTGCGAGATCTGCTTCAAAGGTTTCCTGCACTCGAGCTCGTTGAAGGAACACATCAACGGTGTTCATAACCATATCCGGAGAGTCAAGAAGACTAAATTACCTAAACCACATTGA
Protein Sequence: MTKTLCRICLRTDFDDAGDIDERLTDFHDELCDYDVKLDSLHELIPHNLAFGTLDNQKFYTYYNDRFPDNIIHSTIHTNTTFTHTDVKPSDKVKLEAAETESVETQTEAEIEDPILITEIKEDSEQDLIPEEVLLSVNQEVQNGFIQDDVLPNKEEDLDNIDFIDDVIPNDDLDKDDNMEKEIDKVNNVIDSDSDSEEKPKPKRVYRKRKTKETKSDTVNDIISVEELKYITKDLNIDEKKVFKLNKKIIKFKDRVSWLLDNRKIDLGENVNLDKETFLKMFEKCDKSPLWNRGVLKNSPGGIQKLKKFLLFLLKRYNPEYESVFDIEYLTTRDAKLAEFHARRRSAEYARARHRCDTCYRAFELPSLLDYHNKWHDYCHELGFHIEYLTTRAAKLAEFHARRRSAEYARARHRCDTCYRAFELPSLLDYHNKWHDTSRPHACDICGMRFSARKHLMVHNRTSHYSVYRCKLCPIVTNIYNVMVNHYDQHKGMQYKCDVCLGEYSSKSSLNTHRLTHATLACARCARRFTSEVGLENHMKYKHSEVESSECSKVVTCEKCNIDFESRKDLSKHSKLIHQRTHIYKCLYVGCVERFETAPELRAHTLASGHVRRGAPARRGLHGGAKARGEAALAPREPHVAIMGPDKPFRTCPICQEQVPNKCPTSLYKHHIAQHPTQPYRSAVTHDTLCEHCGKSFFHISVYRDHLNTHTGAKPYACQDCGVRFHMRRSLAIHSERHRPPRYQCKDCGKMFLTSANLFCHRRTHIGDRRFKCEICFKGFLHSSSLKEHINGVHNHIRRVKKTKLPKPH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -