Basic Information

Insect: Philereme transversata
Gene Symbol: -
Assembly: GCA_963924445.1
Location: OZ004347.1:22115765-22120921[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 5.3 5.2e+02 2.5 0.2 2 23 443 465 442 465 0.92

2 16 0.0082 0.8 11.4 0.6 1 23 487 509 487 509 0.95

3 16 1.9e-06 0.00018 22.8 0.5 1 23 513 535 513 535 0.98

4 16 0.0015 0.15 13.6 1.6 1 23 540 563 540 563 0.93

5 16 0.17 17 7.2 0.9 2 23 571 593 570 593 0.90

6 16 0.0021 0.2 13.2 2.6 2 23 601 623 600 623 0.94

7 16 0.0002 0.02 16.4 4.8 1 23 629 651 629 651 0.99

8 16 0.22 22 6.8 4.1 1 23 710 733 710 733 0.93

9 16 3.6 3.5e+02 3.1 1.7 2 23 804 825 803 825 0.94

10 16 0.049 4.8 8.9 0.1 1 23 829 852 829 852 0.94

11 16 2.5 2.5e+02 3.5 1.5 1 12 857 868 857 873 0.89

12 16 0.0058 0.57 11.8 1.5 1 23 886 909 886 909 0.94

13 16 5.5e-05 0.0054 18.2 0.4 1 23 916 939 916 939 0.97

14 16 0.00015 0.014 16.8 2.1 1 23 945 967 945 967 0.97

15 16 0.00017 0.016 16.7 1.2 1 23 973 995 973 995 0.97

16 16 9.3e-05 0.0091 17.5 4.1 1 23 1001 1024 1001 1024 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	5.3	5.2e+02	2.5	0.2	2	23	443	465	442	465	0.92
2	16	0.0082	0.8	11.4	0.6	1	23	487	509	487	509	0.95
3	16	1.9e-06	0.00018	22.8	0.5	1	23	513	535	513	535	0.98
4	16	0.0015	0.15	13.6	1.6	1	23	540	563	540	563	0.93
5	16	0.17	17	7.2	0.9	2	23	571	593	570	593	0.90
6	16	0.0021	0.2	13.2	2.6	2	23	601	623	600	623	0.94
7	16	0.0002	0.02	16.4	4.8	1	23	629	651	629	651	0.99
8	16	0.22	22	6.8	4.1	1	23	710	733	710	733	0.93
9	16	3.6	3.5e+02	3.1	1.7	2	23	804	825	803	825	0.94
10	16	0.049	4.8	8.9	0.1	1	23	829	852	829	852	0.94
11	16	2.5	2.5e+02	3.5	1.5	1	12	857	868	857	873	0.89
12	16	0.0058	0.57	11.8	1.5	1	23	886	909	886	909	0.94
13	16	5.5e-05	0.0054	18.2	0.4	1	23	916	939	916	939	0.97
14	16	0.00015	0.014	16.8	2.1	1	23	945	967	945	967	0.97
15	16	0.00017	0.016	16.7	1.2	1	23	973	995	973	995	0.97
16	16	9.3e-05	0.0091	17.5	4.1	1	23	1001	1024	1001	1024	0.97

Sequence Information

Coding Sequence: atgctgcttaGTCTTGCCTCCAAAACTCGTGGAACAAAAACCACAGTAAGTACTAAATCTAAAAAGAGCGCAGATAACGCTGAAGGTGCTAAAAAGAATAGATATATACCCAAAAGTGGCAAGAGAATATCGGAAAAAGACGATGATGTGATAGAAAttcctgatgatgatgatgatgatcctaaaagagtcaaaaacaaaaaaagatctAGACCTAGAGTGGAGGACGATGTGATTAAAATTCACGATATTTCTaaaagtggcagaaacaaaaaGATTGAAAGCAATAAACGATCTAGAAAAGTCAATGACACGATTGAAATTGACGATGAGCCTAAAGGTGACAAAAGGGGACGGTCGAAAAGTAAGAAAAACTCCAGAAAAGATGATGATGCCACTGTAGTTCGTGTGGATTCCAAAAAGAGGCGGTCTGAAAGCACCAAAAGATCTAGAAGAGATGCTGATACTAGTGAAGTTCGTGATCATTCCAAAAAAAGACTGTCTAAAAGCGAGAATAGGTCCGGAAAAGAGGATGTTATTATTAAAAGTCATGATGATTCCAAAAAGAAGCTGTGCGAACCCAAGAAAAGATCTAAAGAAGATGGTACGATTGAAATACGAGATGATTCTAAAAAGAAACGGTCTGAAAGCAAAAAAAGGTCTAATAAAGATGATAATCTAATTGCTGTTTCAAaaagtaacaaaaataaaaagaccaacaaagaaaaagaagaaaaaagcaagaaaaagtctgaaaaaGATGAAGATTTCAAAATTGGCAACGTTTCAAAGAAACGTTCTAGGAAAAAGGACGTGATTGAGATGAATCATGATGTTTTTAATTGCGACGAAAATAATCGGTCTGAGTGTAAGAAAAGATCTAAAAAAGACGACGAAGTGATTTCTAAATCAAAAGTGACAGAAAGCAAGATTAAATCTAGAAATGATGAAAAGGTGATCAAACTTCCTGACATTTCTAGAAGCAAATGTAGGAAAATGatggaaaacaaaaaaaattcaggACCAGACGAAGGTTTCGAAATTAACACGCGAACTCGCAAAGACGATAGCTTCTTAGAGATAGAGGTCACCGAGATAGATAAACATCTGCATAACATACGCACGATTCTATATCATTCTAACGCGACTCCGATACAAAACCACAACGAGGCTGGTTTCTCTTGCGGTTTCTGCATCGAACAATATCTTCTAGCGGCTGAACTGAAAATGCACACTCTTGAAAATCACGGCGAGGAGTATATACAAAGATTCATGGGCGGTCAAAATATGTTCGGATACGTAGTCAAACTAGATATAACCTCACTTCGCTGCGTGCTGTGCGCGCGAAAAATATTCACACTCGAGCTGTTGATGGATCATTTGGAGACTAAACACGACAAAATGTTTTATAAAGACATAAAAAATCACATTCTACCATTTAAATTTCAAAGCGACATCTTCTCCTGCATCATTTGCGATCGCAGATTCGACCGTTTCATGCAGATGCAATGGCACATGAGCGTTCATTACAGAAACTACGAATGCGATGATTGTAATAAAGCCTTCATTAATAAGGCCACGCTACGGACCCATATCTACAGACACAGAACTGGCATCTTTAAATGTTCGTTTTGTAACAAAGCTTTCGACACGAAGGAGAAGTGGAACGTCCACGAAAAGTTTGTCCATATGACTGATCACAAACGAAACAAATGCACTTATTGCAACGAATTGTTCACGAGATATACCAAGAAGATGGAGCATATGGTCGAGGTTCACGGTCACAAGCAGCGCGTCGTCAAGTGCTTGGCTTGCAGCAAGACCTTCAAGACCAAAGAAAAGCTTACAAAACACAACAAGAGAGATCATTTGCTGATGCGTAACTATAAATGCGATAAGTGTAATGGCTGTTTCTTCGATAACTACGATTTGCGGAGACACAAGCGCATACATATGGATGCAAAGCCGTTTACTTGTGAAGATGAAGAAGATGAAGAAAAAATCGAAGCAGGGAGACCAGAGTTCAGTAAACCTAACCCGAATGAGTTGCGAAAGCAAAGACACAACCTGAAACAGATATTGCTGGCAACAAATGCAACGCCAATAAGGCGCCACACTGATATGGGCTACGTCTGTAGCTTCTGCACAAATTGTTATCACAAACCCGCAGATCTCAAGAAACACACGCTAGGGACTCACGACAGTAAAACAAAAGCAGCTTTCATGCAAAAGATGTGTATCTGGAGGTTCCTCGTCAAACTTGACGTAACAGATCTAGAGTGTGCTATATGCGGAGATGGAGTCGACTCTTTCGCAGAAGTTATTGACCATCTCCAGAGTCACGGAAAAGTTCTATACAGCGATGTAAAAAACTACATAATACCGTTTAGTTTCGATGATGCCTTACTAAAATGTACGATCTGCTTCGAAGTTCATATGACATTCAAATCGCTTCAGATACACATGTATGAGCATTATAGAAATTTTGTTTGCGCTGTCTGCGGCGCGGGGTTTGTTACTCAACAAATGGTTAGCACACATTACCTCAACTCGCACAAAATCGGGGCTTTCCATTGCTCTTACTGCACGAAAATTTTCGAAACCATGAATAAAAAGAAGTTTCATGAGTATCGTTCACACGAGGTGAAAAAGATGTATAAGTGTGGATATTGCGATGAGAAGTTTAAGAGTTTTGACATGAAAAGGTTGCATCAGATAAACGAACATAACATTAAACCACCCACCTTTCGTTGCAGCGCATGTAATAAAGCTTTCTCTAAACCTTCTTTGCTCGCCACCCACGTTAAGAAGGATCATCTTATGGAGACACGTTTCGAGTGTTCCTATTGCGACAAAGCGTTCTTCTTTAAATTCCAATTGAATACGCATTTAGTCAGTCACACGCATGTTAAGGATTTCAATTGTCAAGTCTGCAATAAATCCTTTGGTAGGATGAAGACTCTGAGAGAGCATGTAAAGATACATGCTGATGACCGCCGCTTCAGATGCCATCATTGCGATGTTGCGTTTGTTCAGAAAATCGGCTTGAAGAGACATCTTCAGAAGAAACACGATGAAGTATTAGATTAG
Protein Sequence: MLLSLASKTRGTKTTVSTKSKKSADNAEGAKKNRYIPKSGKRISEKDDDVIEIPDDDDDDPKRVKNKKRSRPRVEDDVIKIHDISKSGRNKKIESNKRSRKVNDTIEIDDEPKGDKRGRSKSKKNSRKDDDATVVRVDSKKRRSESTKRSRRDADTSEVRDHSKKRLSKSENRSGKEDVIIKSHDDSKKKLCEPKKRSKEDGTIEIRDDSKKKRSESKKRSNKDDNLIAVSKSNKNKKTNKEKEEKSKKKSEKDEDFKIGNVSKKRSRKKDVIEMNHDVFNCDENNRSECKKRSKKDDEVISKSKVTESKIKSRNDEKVIKLPDISRSKCRKMMENKKNSGPDEGFEINTRTRKDDSFLEIEVTEIDKHLHNIRTILYHSNATPIQNHNEAGFSCGFCIEQYLLAAELKMHTLENHGEEYIQRFMGGQNMFGYVVKLDITSLRCVLCARKIFTLELLMDHLETKHDKMFYKDIKNHILPFKFQSDIFSCIICDRRFDRFMQMQWHMSVHYRNYECDDCNKAFINKATLRTHIYRHRTGIFKCSFCNKAFDTKEKWNVHEKFVHMTDHKRNKCTYCNELFTRYTKKMEHMVEVHGHKQRVVKCLACSKTFKTKEKLTKHNKRDHLLMRNYKCDKCNGCFFDNYDLRRHKRIHMDAKPFTCEDEEDEEKIEAGRPEFSKPNPNELRKQRHNLKQILLATNATPIRRHTDMGYVCSFCTNCYHKPADLKKHTLGTHDSKTKAAFMQKMCIWRFLVKLDVTDLECAICGDGVDSFAEVIDHLQSHGKVLYSDVKNYIIPFSFDDALLKCTICFEVHMTFKSLQIHMYEHYRNFVCAVCGAGFVTQQMVSTHYLNSHKIGAFHCSYCTKIFETMNKKKFHEYRSHEVKKMYKCGYCDEKFKSFDMKRLHQINEHNIKPPTFRCSACNKAFSKPSLLATHVKKDHLMETRFECSYCDKAFFFKFQLNTHLVSHTHVKDFNCQVCNKSFGRMKTLREHVKIHADDRRFRCHHCDVAFVQKIGLKRHLQKKHDEVLD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -