Basic Information

Insect: Philereme transversata
Gene Symbol: -
Assembly: GCA_963924445.1
Location: OZ004347.1:22377264-22392702[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.14 14 7.5 0.1 1 23 312 334 312 334 0.96

2 18 0.63 62 5.4 0.5 2 23 359 380 358 380 0.95

3 18 0.0092 0.91 11.2 0.5 2 23 403 425 402 425 0.94

4 18 0.0001 0.01 17.3 0.1 1 23 429 451 429 451 0.98

5 18 0.0022 0.21 13.2 2.6 1 23 456 479 456 479 0.96

6 18 0.021 2 10.1 1.5 2 23 487 509 486 509 0.95

7 18 4.1e-05 0.004 18.6 1.8 1 23 516 539 516 539 0.96

8 18 3.4e-05 0.0033 18.8 0.3 1 23 545 569 545 569 0.99

9 18 0.00094 0.093 14.3 0.2 1 23 575 597 575 597 0.96

10 18 0.59 58 5.5 5.3 3 23 694 716 693 716 0.93

11 18 2.6 2.6e+02 3.5 0.1 5 23 746 765 743 765 0.93

12 18 0.048 4.7 8.9 0.2 3 23 785 805 784 805 0.97

13 18 0.0015 0.15 13.6 0.3 1 23 809 831 809 831 0.98

14 18 0.0035 0.34 12.5 1.2 1 23 836 859 836 859 0.91

15 18 0.13 12 7.6 2.6 2 23 866 888 865 888 0.92

16 18 0.005 0.49 12.0 0.3 2 23 896 918 895 918 0.96

17 18 2.1e-05 0.002 19.5 0.6 1 23 922 944 922 944 0.97

18 18 0.043 4.2 9.1 2.7 1 23 950 973 950 973 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.14	14	7.5	0.1	1	23	312	334	312	334	0.96
2	18	0.63	62	5.4	0.5	2	23	359	380	358	380	0.95
3	18	0.0092	0.91	11.2	0.5	2	23	403	425	402	425	0.94
4	18	0.0001	0.01	17.3	0.1	1	23	429	451	429	451	0.98
5	18	0.0022	0.21	13.2	2.6	1	23	456	479	456	479	0.96
6	18	0.021	2	10.1	1.5	2	23	487	509	486	509	0.95
7	18	4.1e-05	0.004	18.6	1.8	1	23	516	539	516	539	0.96
8	18	3.4e-05	0.0033	18.8	0.3	1	23	545	569	545	569	0.99
9	18	0.00094	0.093	14.3	0.2	1	23	575	597	575	597	0.96
10	18	0.59	58	5.5	5.3	3	23	694	716	693	716	0.93
11	18	2.6	2.6e+02	3.5	0.1	5	23	746	765	743	765	0.93
12	18	0.048	4.7	8.9	0.2	3	23	785	805	784	805	0.97
13	18	0.0015	0.15	13.6	0.3	1	23	809	831	809	831	0.98
14	18	0.0035	0.34	12.5	1.2	1	23	836	859	836	859	0.91
15	18	0.13	12	7.6	2.6	2	23	866	888	865	888	0.92
16	18	0.005	0.49	12.0	0.3	2	23	896	918	895	918	0.96
17	18	2.1e-05	0.002	19.5	0.6	1	23	922	944	922	944	0.97
18	18	0.043	4.2	9.1	2.7	1	23	950	973	950	973	0.97

Sequence Information

Coding Sequence: ATGGCAGTAGAAAAACAAGAAATAGAGACTTATTTCGGGAAGTGCAAATGCTGTCTCAACTACGGTTATCTGAGAACTATGTGGGAGGAGCATGTCGTAGAAGACCAGACTGAAATCTATGGGCAAATGCTCACGCAATGTTTCTCAATCTCGTGGACAATACAAGAGACGGAGGACGATGACCAGATCTGCGAGGATTGCATATGGAAGCTGCGAGAGGCCTACATGTTCAAGAAGCAAGTATTGAAAAATCAGAAACAACTGGAACAGGTAACCGAGGAAGATGTCATTGAAGATAATGCTGAGGTAAAACAAGAGCCGGAAGATTATGTTGTCGAATATTTGGATGAAGAGATACTAGAGAAACATAATGTTAATAATGATGATTCAGATGAAGAGAGCCTCGATGAGCAGGAAAGTCAAGATGGTGTTAGTTTAAAGGATGAAGAAGATTATGAGAATTATGATGAAAATCAAGATCCTCTGGATGAAGATGATGAAGACTTCGAGCCAGAAACAACAACTCCGAGAAAGCGGAAACCTCGCCAAAGAGAGAGTGCATCGGAGAGTGACAGCGATGCACCCAAACCAAAATGGCCAAAGAAACTACCCGTGGATGACCGGAATAAGACTTACAAGCAGTACATTGAGGATGACTTGAAGAAGGCTGTTGATGCGGTTATTGGGAAGCGGATGAACCAACGGGCTGCGTCTAAGCATTACCGAATACCGAGGAAGACTTTGAGTGCTAAAGTCAGAGCGTTTAAAAATAACGGGGAGAATAGACCGCTCACACCGAAATCTGACGATGAACCACGAGATAAACAAGACAATGAAGACGCCATGTTGATTATACGGAAACACAGAGAAAACGTACATTCTGTGCTAGCTTACTCGAATGCTACGCCTATAAGAAACTTCTATGGCGAGGGCTATGTTTGCGCTTTCTGCCCAGATCAATTCCCAAAGGCATCTGCCTTAAAAATCCATTCACAAAACCATGGAAACATCTCTAAACTCTACGTCGTACATCACGTTAGAACACACGTTATGAGACTAGACGTGACGGGCTTAAAATGTCTCATTTGCAATAACAAGTTAGAAGATTTGCAGTCATTAATGCATCATTTAGCCGAACACGGAAAACCTATGCATTTCGATATTAACAACCATATGATACCCTTCAAGTTCGATACAAAAGAATTGAAATGTGTTGAGTGTGGAACCCAATTTAACCTGTTCAAGAACTTATCAGAACATATGGCTAACAAACATTACAGGAATTATGTGTGTGAACGTTGCGATCGAGGTTTCATTAACAGAGTTAACTTAGTAGCTCACAAAGATACGCATAAAAGCGGTAAATTCGCGTGCGATTACTGCGGGAAAACTTACGATACGCGCCGGAAAAAAACTAACCACGAACGAAAAACTCACATACTACAAACTAAAACGGTTAAATGCGAGTATTGTAAGATGAGATTCGAGAATAACGCGCAAAAGAAAAACCATGAGTTGCGAACGCATATGAAGCAGCAATTGCCGTTTTTTTGCAACGCTTGCGATAAATCTTACGCGAGACAGCATTCATTAAGAGCTCATATACAGAAGGAGCATTTATTGTCCCGCCCTTACAAATGCCCTGAGGAAAACTGTGATAAGGGCTTCTATTTGAACAGGACTTTGCAAGCCCATATGTTAACGCATCTTGAGGAGAAGCCATTTCCTTGTTCTCTGTGCCCTAAGGCGTACAGATCTGGGAAGGCTTTGAAGGatcatatgtatttacataatgagAAGGCGTTTAAATGCGCTATGTGTTGTGAAGAGGAAACAGAAATACCGCTCCCACCAACCAAAGAGCAGAAGGCAGTCGCTGAGAACATGGACGTGTTAAACAAACACAGAGAGAACATACATTCAGTACTAGCGTACTCAAACGCAACGCCTCTCAGAGGATACTGGGATAACAAAGATGTCTACCCAAAAACACACACACGCCAGTTCATCCAAGAGATAAAGACGTTACTCACTCACATCAACTTGACGCCATTTCGCTCTAGAGCCAACACTCCCTGTTGCTTCTACTGCAAAGACCACAAGTCCTTCCCCTCTCCAGAAGACCTGCGCGCGCACACACAGCACCACGACCGAACTACCTACCTAGAAATCATTATGAGACCATCCTGGAACCATGAGACCATAAAACTTGACCTCAAAGATGCTTTCTGCATTAAATGCAATACCCCACTTCCAAATTGGGCAGATATGCTCGACCATTTAAATACCAACCACGGTATCACATTGGCATATCAGAATAAAATGATACCGTATATACTAGATGCTAATATTTGTGTGTTTTGTGACAAGAATTTCTCAGCGTTTATGCTACTCGATGCCCACTTAAACACACATCTGCAGAATTATATGTGCGGGCACTGCGGGGAACCCTTCATCACGGACCAACGTTTAAGAGCCCACGAGAAGATTCATGAGACTGGTCGATATCCGTGCCACAGCTGTGACAAAGTGTTTACGTTAGAAAAGTATATGAAGAAGCACGCTGTTTCTGCACACACGGACCAGTTAAAAGTGAAGTGTTATCATTGTAGTGAAATATTTAAAAGTGAACATCAACGGCAAGCTCATATAGTGAATTCTCATAAGGAACATGTTAATTATATTACTTGTGAGTTGTGTGGGACTGTGTTTGATTGGATGAGGAATTTTATGAGGCATATGAAGAGGGCCCACGATTCGGAGTATCCTTGTGATCAGTGCGGTAAGTTCTTTGCTTCGAAAAAGCTGTTGAGAGAGCATGAGTTAAAGCATACTGGTGATAAACAATTTAAGTGTTTGGTTTGCTTTAAGAAGTATTACTCTCTGACTAGTATGAGAAGTCATTTAAAATATGCTCATAAGAATGTTACtaatgactaa
Protein Sequence: MAVEKQEIETYFGKCKCCLNYGYLRTMWEEHVVEDQTEIYGQMLTQCFSISWTIQETEDDDQICEDCIWKLREAYMFKKQVLKNQKQLEQVTEEDVIEDNAEVKQEPEDYVVEYLDEEILEKHNVNNDDSDEESLDEQESQDGVSLKDEEDYENYDENQDPLDEDDEDFEPETTTPRKRKPRQRESASESDSDAPKPKWPKKLPVDDRNKTYKQYIEDDLKKAVDAVIGKRMNQRAASKHYRIPRKTLSAKVRAFKNNGENRPLTPKSDDEPRDKQDNEDAMLIIRKHRENVHSVLAYSNATPIRNFYGEGYVCAFCPDQFPKASALKIHSQNHGNISKLYVVHHVRTHVMRLDVTGLKCLICNNKLEDLQSLMHHLAEHGKPMHFDINNHMIPFKFDTKELKCVECGTQFNLFKNLSEHMANKHYRNYVCERCDRGFINRVNLVAHKDTHKSGKFACDYCGKTYDTRRKKTNHERKTHILQTKTVKCEYCKMRFENNAQKKNHELRTHMKQQLPFFCNACDKSYARQHSLRAHIQKEHLLSRPYKCPEENCDKGFYLNRTLQAHMLTHLEEKPFPCSLCPKAYRSGKALKDHMYLHNEKAFKCAMCCEEETEIPLPPTKEQKAVAENMDVLNKHRENIHSVLAYSNATPLRGYWDNKDVYPKTHTRQFIQEIKTLLTHINLTPFRSRANTPCCFYCKDHKSFPSPEDLRAHTQHHDRTTYLEIIMRPSWNHETIKLDLKDAFCIKCNTPLPNWADMLDHLNTNHGITLAYQNKMIPYILDANICVFCDKNFSAFMLLDAHLNTHLQNYMCGHCGEPFITDQRLRAHEKIHETGRYPCHSCDKVFTLEKYMKKHAVSAHTDQLKVKCYHCSEIFKSEHQRQAHIVNSHKEHVNYITCELCGTVFDWMRNFMRHMKRAHDSEYPCDQCGKFFASKKLLREHELKHTGDKQFKCLVCFKKYYSLTSMRSHLKYAHKNVTND

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01182783;
90% Identity: iTF_01182783;
80% Identity: iTF_01182783;