Basic Information

Insect: Philereme transversata
Gene Symbol: -
Assembly: GCA_963924445.1
Location: OZ004345.1:25668929-25684036[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 1.6 1.6e+02 4.1 0.1 3 23 110 130 108 130 0.95

2 19 0.0025 0.24 13.0 0.2 3 23 135 156 134 156 0.94

3 19 2.2 2.1e+02 3.7 3.1 3 23 161 182 159 182 0.91

4 19 1.3 1.2e+02 4.5 0.2 3 23 411 432 409 432 0.94

5 19 0.035 3.4 9.4 0.3 1 19 440 458 440 461 0.94

6 19 0.058 5.7 8.7 0.3 2 23 471 492 470 492 0.94

7 19 7.1 6.9e+02 2.1 0.5 1 23 508 531 508 531 0.81

8 19 0.0052 0.51 12.0 2.4 1 23 540 563 540 563 0.98

9 19 2.4 2.4e+02 3.6 3.1 5 23 611 631 606 631 0.84

10 19 0.005 0.49 12.0 0.1 1 21 640 660 640 663 0.84

11 19 9.3e-05 0.0091 17.5 2.7 1 23 697 719 697 719 0.97

12 19 4e-06 0.0004 21.8 2.0 1 23 726 748 726 748 0.98

13 19 4.3e-05 0.0043 18.5 1.4 1 23 753 775 753 775 0.96

14 19 0.0011 0.11 14.1 1.1 1 23 781 803 781 803 0.96

15 19 2e-06 0.00019 22.7 1.6 1 23 809 831 809 831 0.98

16 19 6.4e-05 0.0062 18.0 2.2 2 23 838 861 838 861 0.96

17 19 0.0019 0.19 13.3 0.6 2 23 871 893 870 893 0.96

18 19 0.0025 0.25 13.0 0.8 1 23 898 920 898 920 0.98

19 19 0.00057 0.056 15.0 3.7 1 23 926 949 926 949 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	1.6	1.6e+02	4.1	0.1	3	23	110	130	108	130	0.95
2	19	0.0025	0.24	13.0	0.2	3	23	135	156	134	156	0.94
3	19	2.2	2.1e+02	3.7	3.1	3	23	161	182	159	182	0.91
4	19	1.3	1.2e+02	4.5	0.2	3	23	411	432	409	432	0.94
5	19	0.035	3.4	9.4	0.3	1	19	440	458	440	461	0.94
6	19	0.058	5.7	8.7	0.3	2	23	471	492	470	492	0.94
7	19	7.1	6.9e+02	2.1	0.5	1	23	508	531	508	531	0.81
8	19	0.0052	0.51	12.0	2.4	1	23	540	563	540	563	0.98
9	19	2.4	2.4e+02	3.6	3.1	5	23	611	631	606	631	0.84
10	19	0.005	0.49	12.0	0.1	1	21	640	660	640	663	0.84
11	19	9.3e-05	0.0091	17.5	2.7	1	23	697	719	697	719	0.97
12	19	4e-06	0.0004	21.8	2.0	1	23	726	748	726	748	0.98
13	19	4.3e-05	0.0043	18.5	1.4	1	23	753	775	753	775	0.96
14	19	0.0011	0.11	14.1	1.1	1	23	781	803	781	803	0.96
15	19	2e-06	0.00019	22.7	1.6	1	23	809	831	809	831	0.98
16	19	6.4e-05	0.0062	18.0	2.2	2	23	838	861	838	861	0.96
17	19	0.0019	0.19	13.3	0.6	2	23	871	893	870	893	0.96
18	19	0.0025	0.25	13.0	0.8	1	23	898	920	898	920	0.98
19	19	0.00057	0.056	15.0	3.7	1	23	926	949	926	949	0.98

Sequence Information

Coding Sequence: ATGTCGTCAGACGATTCGGACGATGAGCCTCTAGCCGTATTAGcatcaaaaagaaaaactaATTACGAAGTCGAAATCTTGCCTGTAAGCGAGAGCAAGACCCGTAAAAAGAAGTCATTCTCCACCAAAAAGGACTGTGATGTGACCATAGAGGTTCAATACAAAGATGATCTTTCACCGGTAACAGTCGAAAGACCCACTGATGTATGGCTGTATTTAAAAGACTTGAACCCAAATGGGCCGTACAGTTGTTTACTCTGTTCAGAATGGTTCTTACACAAAACTAAAATAGTTATTCACTATGTGGTACATCATAAAAAGGATTTTTGTGGGATATGCAGATATTTTGTACCTGACAGACAAGCGTGGGAAGCCCACTTAAAGTTCCATACACCTTGGCTATGCTCACAATGCCCCAAGACATTCCCCACTGAAGCTTTGTTAAGAGAACACTTCAGTAGCATACACATGCTAGTTCACTGCAGACTCTGCCACACCCGTCTCAATGACAATGATGAGTACAACGCACATCTGTTCCAAAAACACAGTGTTTCAAACGTCGCCTGTAAAAACGAGGAGTATTTCTGGGAGTTTGAGCCAGAAGAGTTCAAGTACCTTTGCATACTTTGCTCTAAGTCCagtaataaaatacagacattCTCCAACCACTACATGGCTTACCACCATCTGACTTTGAAATGTTTGGCCCCTCTCATCTCAGGCAAGAACTGGAACTTCCCAGTGCAAGGTGCTGAAATAAGTCTTGAATTTATCAACGAGCAGCTCAAAGGATTTGAGAAGTATGGCTATCTAGATTTAGATAAAAAACCAGACAGGCTAGTGGAGAAAGATGAAAATGTATGTCTAACAAGAATGACAACCAGTGAGTTTGTTATTGATATGGTCAAGGAAGAAGCCCTGAGTGAACCTGAGGATAACACTGGAACTGCTGAAGAAGATGAGGGAACAGCAGATGATGATGAAAAGACAATGAATCAGAAAGATGAGACAGAATTTGATACAGCAGATAATGAACGTCGTGCATATCTTATAAGAACGTACAAAGGTGACACTGACTTTGATTCCACACAAGTAGAAATGATTATGATGCAGAAATGTTACTTTGACTATGTCAATGATACTTTGAATAATATAAACTCTAATGTGATGCCTCCAATTTCAATGATTAACTACAGAACTGCTTTAGATGACCAACTGGTCTATATTAATTGTGATTTATGTAAATCTCAGTTTCCCGCTGTAAACTCATTCATACGACACATGATAAAGATGCATGGTTTTAGGTCATTGTCAACATTTTATTGTCGAGTCTGCGCTACAACTTTTGACAGTTACTCTGAGTTGGAGCAGCATGAGTCCCAGGAATTAGGTGATTTTGAGGACCTATGGATATGCCAGTTTTGTGAGAAAGAGTTTGACGATAGAGGGGAGACCCGTAACCATCTGACAGAGCATTGGGATGCGATCGAGTATGATAACTGCTTTAGCCCACATTTAGGATTCAAGTGCAAGTTCTGCCCTACATTGTTTTGGAATGAGACTGACAGGGAGATTCATCAGGTCAGAGTACATTTTCAGAAGCATAAAGAGGAATATTACAAGTGTCAGAGCTGTGATGAACTCTTCAGTGACAAGGTATGGTTCATCCACCACTACCTTACAAAACACTCTACGAATGACGAGATCCCGGATGGTGCCTACCTTCTCAAATGCTGCTTTTGCTGTATAGTCTTTCAGAATGTGACTGAAATCAGAAGTCACTTTGATGCTAAGCATCCAGAGGCGACCAGGGTCTTCTGTTCATTGGATACCTGTCAATACAAACCGTTCAGTCATAGGAAGTCTTTTCAGCTGCATTTGAAGTCATTCCACGACAGGAAGAAACGTCCAGAGACGTACGCTTGTGATTACTGTGGCAAGGTGTTCAACAGCCTGAAGGGGCGGAGCGCGCACGTGGTGCAGGCGCACGGCCCCGGTCGGTTCACGTGCACTCTCTGCATGGAACAACTGCGCACTGCTGATGAGAGGAAGATTCACTACCTACTCCGCCACCCGGGCAGGCACCCCTTCCAATGTCGAGACTGCGACAAATCCTTCCAGTACAAGTCATCTCTGTACCTGCATCGGCAAGAACACGCGCCTGATAAGCAGGACTACAAGTGCACATACTGTGGGAAGGAATTCAAGAAACGTGATTCGTTCCGGGAACATGTAATGATCCACGAGGGACCAAAACACGCATGCTCCTACTGCCCCATGGTATTCGTCCAACGTTCCAACATGTTGCGACATGAGAGGAGACATACTGGGGAACGGCCTTACGCGTGCCAGTACTGTCCCAAAACCTTCTCTGATAAAGGAGCTTGCTCTTCACATGCTAGGGTCCATCAGAAAATGCCAGCGTTCCCATGCATGTACTGCGGACAGACATTCGTACAAAAGTCGAAACTAACCTATCATATCAGAAAACATACTGGAGAAAATCTAGAAACGTGTCCGCACGCGAACTGCGGCAAGATATTTACCAGCCCGTGCTCCCTGCGCGAGCATATGAAGATACACGAAAGGAAACAAGTGTTGAACCCCGTCAAGTGCCCTCTTTGCTCCAAATCGTATCAAGACGAGAAGTACATGATGCGTCACTTGCGCGCGACGCATACGAACGCCGAGTACGTCTGTCCGCTTTGCAAGAAAAAGCTGCACAGCTCCGGCTCGCTTAGAGACCACGTCGTGACTCACAGTACTTTGAAAGCTTTTAAGtGCAATCAATGCTCGAAAACCTACAACGTGAAGCGTACAATGATCCGTCACCTGCGCCGCCGCCATGGACACAAGAGCGAGGGTTCCCTCGCTGAGTACTACAGCAAGCTCGACCCGAGGGAATGCAAACTAAACCTAGACGAAGCCACCTTGACCAATATCTTCGGACCCCCCAAAAGAAAGCTCAGAGACGCAGTCAACTACACCGCCATCAATAAAAGGCCAAAACTACGGTTAAAATCAAAAGTAGCTAAACAATGTGATGATGAAAGTGAGCCTGAAATACCATTAGATTATGTTCAGGTTAAAATAGAGTGTCAGGATGTGGATGAGACGGACGGTGATGAGATACAGCCAACTGACTTTGTGAGTGTTAAGATTGAGTGCGCGGATGCTGTTGACAAGTGTGAACAGTTTGGAGGTGACGAAGACTGA
Protein Sequence: MSSDDSDDEPLAVLASKRKTNYEVEILPVSESKTRKKKSFSTKKDCDVTIEVQYKDDLSPVTVERPTDVWLYLKDLNPNGPYSCLLCSEWFLHKTKIVIHYVVHHKKDFCGICRYFVPDRQAWEAHLKFHTPWLCSQCPKTFPTEALLREHFSSIHMLVHCRLCHTRLNDNDEYNAHLFQKHSVSNVACKNEEYFWEFEPEEFKYLCILCSKSSNKIQTFSNHYMAYHHLTLKCLAPLISGKNWNFPVQGAEISLEFINEQLKGFEKYGYLDLDKKPDRLVEKDENVCLTRMTTSEFVIDMVKEEALSEPEDNTGTAEEDEGTADDDEKTMNQKDETEFDTADNERRAYLIRTYKGDTDFDSTQVEMIMMQKCYFDYVNDTLNNINSNVMPPISMINYRTALDDQLVYINCDLCKSQFPAVNSFIRHMIKMHGFRSLSTFYCRVCATTFDSYSELEQHESQELGDFEDLWICQFCEKEFDDRGETRNHLTEHWDAIEYDNCFSPHLGFKCKFCPTLFWNETDREIHQVRVHFQKHKEEYYKCQSCDELFSDKVWFIHHYLTKHSTNDEIPDGAYLLKCCFCCIVFQNVTEIRSHFDAKHPEATRVFCSLDTCQYKPFSHRKSFQLHLKSFHDRKKRPETYACDYCGKVFNSLKGRSAHVVQAHGPGRFTCTLCMEQLRTADERKIHYLLRHPGRHPFQCRDCDKSFQYKSSLYLHRQEHAPDKQDYKCTYCGKEFKKRDSFREHVMIHEGPKHACSYCPMVFVQRSNMLRHERRHTGERPYACQYCPKTFSDKGACSSHARVHQKMPAFPCMYCGQTFVQKSKLTYHIRKHTGENLETCPHANCGKIFTSPCSLREHMKIHERKQVLNPVKCPLCSKSYQDEKYMMRHLRATHTNAEYVCPLCKKKLHSSGSLRDHVVTHSTLKAFKCNQCSKTYNVKRTMIRHLRRRHGHKSEGSLAEYYSKLDPRECKLNLDEATLTNIFGPPKRKLRDAVNYTAINKRPKLRLKSKVAKQCDDESEPEIPLDYVQVKIECQDVDETDGDEIQPTDFVSVKIECADAVDKCEQFGGDED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -