Basic Information

Insect: Philereme transversata
Gene Symbol: -
Assembly: GCA_963924445.1
Location: OZ004347.1:22516452-22519358[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.72 71 5.2 0.1 2 23 50 72 49 72 0.89

2 18 0.011 1.1 10.9 0.3 2 23 99 120 98 120 0.96

3 18 0.00024 0.023 16.2 0.9 1 23 124 147 124 147 0.96

4 18 3.2 3.1e+02 3.2 0.3 1 21 151 171 151 172 0.91

5 18 0.00042 0.042 15.4 1.1 2 23 180 202 179 202 0.93

6 18 9e-07 8.8e-05 23.8 3.9 1 23 209 232 209 232 0.98

7 18 0.0085 0.84 11.3 0.3 2 23 238 259 237 259 0.96

8 18 0.00019 0.018 16.5 0.9 1 23 265 287 265 287 0.92

9 18 0.21 20 6.9 4.3 1 14 293 306 293 308 0.90

10 18 0.41 41 6.0 0.7 2 23 370 391 369 392 0.93

11 18 0.82 81 5.1 1.2 3 23 420 440 418 440 0.92

12 18 2.4 2.3e+02 3.6 0.6 1 23 444 467 444 467 0.82

13 18 0.027 2.6 9.7 0.7 1 21 471 491 471 492 0.94

14 18 0.018 1.7 10.3 2.5 1 23 499 522 499 522 0.94

15 18 0.0034 0.33 12.6 5.3 1 23 529 552 529 552 0.97

16 18 0.00032 0.031 15.8 2.5 1 23 557 579 557 579 0.96

17 18 2.7e-06 0.00026 22.3 1.3 1 23 585 607 585 607 0.93

18 18 1e-06 0.0001 23.6 0.6 1 23 613 636 613 636 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.72	71	5.2	0.1	2	23	50	72	49	72	0.89
2	18	0.011	1.1	10.9	0.3	2	23	99	120	98	120	0.96
3	18	0.00024	0.023	16.2	0.9	1	23	124	147	124	147	0.96
4	18	3.2	3.1e+02	3.2	0.3	1	21	151	171	151	172	0.91
5	18	0.00042	0.042	15.4	1.1	2	23	180	202	179	202	0.93
6	18	9e-07	8.8e-05	23.8	3.9	1	23	209	232	209	232	0.98
7	18	0.0085	0.84	11.3	0.3	2	23	238	259	237	259	0.96
8	18	0.00019	0.018	16.5	0.9	1	23	265	287	265	287	0.92
9	18	0.21	20	6.9	4.3	1	14	293	306	293	308	0.90
10	18	0.41	41	6.0	0.7	2	23	370	391	369	392	0.93
11	18	0.82	81	5.1	1.2	3	23	420	440	418	440	0.92
12	18	2.4	2.3e+02	3.6	0.6	1	23	444	467	444	467	0.82
13	18	0.027	2.6	9.7	0.7	1	21	471	491	471	492	0.94
14	18	0.018	1.7	10.3	2.5	1	23	499	522	499	522	0.94
15	18	0.0034	0.33	12.6	5.3	1	23	529	552	529	552	0.97
16	18	0.00032	0.031	15.8	2.5	1	23	557	579	557	579	0.96
17	18	2.7e-06	0.00026	22.3	1.3	1	23	585	607	585	607	0.93
18	18	1e-06	0.0001	23.6	0.6	1	23	613	636	613	636	0.97

Sequence Information

Coding Sequence: ATGTGCGTTTACTGCTGCGACCAAATCGAAGACCCCGACGAGTACAGGTGTCACATGGATGCGATGCATCATTCTGTTGATATTAACACAGCTTTTGCACATACCAAGCGTAGGCATGACCACCTGAAGGTCGACTGCGTTAACCTAAAGTGCAGATTATGTCAAGAACCTTTTGACACAATCGCTGAAGTAGCTCAGCATCTTACAGatcaacacaaaaataaagatatCAATGACTTGAATCTGAACTATGAAGTGGGCTTGCACCCCTACCGATTAATTAAAGACAAATTGGTTTGCCTCGTGTGCAATGTGAAGCTGCCGACCTTGACCAAACTTACACGACACATGTCCTCGCATTACGCGGAATACTCTTGCAAACTTTGCGACAAAAGCTATCTGAACGAAGAAAACTTGAGAATCCACATCAGATTTAGTCATTCAGAGAAATACATGTGTAGAAAGTGTATGATGATGTTTTCCACGCTAGAAGAAAAGAAAGGACACTTGAAAATTTCTACGCAATGCTGGGGAACCATGTGCAGCCATTGCGGGGAGAGATTCCCCTCTTGGGATCAGAAGCAGAAACATTTGGTCAGAGAACACAACATCACACCGATCACTTACACATGTCCGGATTGTGAGAAAGTGTTCAAATCAAGGTATAATTTATACCACCATTATAACACTACTCATTCGGAATCGGCACTGATGTGTTcttattgcgaaaataaatttaaaagtcaGAGTGTTCTTGATGATCACCTGATTGTGCATATCGGTGTGAAGCAATTTAACTGCACTGTATGTTCGAAGGCGTTCTCGAGATTTAAGGCTTTACAAGATCACATGTGGACGcatagtgcaataaagaaattccAATGCAGGATTTGTGATAAATCATTTTGCAAGAGATATTCTACACTGTATCCGTTCAGGTTACGAGGCAAGACTTTGATGTGCGTTTACTGCTGCGATGAAATCGAAGACCCTGACGAATACAGATGTCACATGGATGGGACGCACAAGACTGTCGATCTATACACCGCTTTTGCGCACACTAAGTGCAGAGATAGAGACTATCTAAAGGTCGACtgcattaatttaaaatgtagATTGTGCAACCATCCATTCGAGACAGTCGCTGAAGTAGCTGAACATCTGTCAGAACACCACGATGATAAAGATATCCAAGACATGGACCTAAACTATGAAGTGGGCCTGCATCCGTACCGATTGATCAAAGACAAATTGTTCTGCCTCGTATGTAAAATGAAACAGCCGACATTGACTAAGCTCACAAGGCATATGTCCTCGCATTATGCAGACTATTCTTGCGATGCTTGCGACAAAAGTTATCTAAATGTAGAAAGTTTACGGTTCCACATAAAGTTTAGCCATTCAGAAAAATACATCTGTCGAAAATGCACGATGGAGTTTTCCACGTCAGAAGAAAGGAAAGAACATCTGAAAAGATCTTCGAAGTGCTGGGGGTTTGTTTGCGTCCATTGTAAAGAAAGATTTTCATCTTGGGAACGAAAACAGAAACATTTAGTTAGTAGACACAACGTGCAGGCTTTGACCTACCCATGTTCGGACTGCGGAATTATGTTTAAATCTAGGGTATGCTTTTATCATCATTACAATAAGACGCACTCGGATCTTGCACACATGTGCTCGTATTGTGGAAAGAAATTTGGAAATAAAGGTCTGCTAGATGATCATCACCTCATACATACTCGTGAAAAGCACTTCCAATGCACTGTATGTTCGAAAGCGTTCTcgagaaataaaaatttacgtGATCACATGTGGACGCACAGTGATAAAAAGAGATTTCCTTGTATGATTTGCGAAAAGACATTTAGTCAGAAAGTCAGCTTAAATTCTCATATGAAAAGTGTCCATCCAGACGCGGAATACTCTTAA
Protein Sequence: MCVYCCDQIEDPDEYRCHMDAMHHSVDINTAFAHTKRRHDHLKVDCVNLKCRLCQEPFDTIAEVAQHLTDQHKNKDINDLNLNYEVGLHPYRLIKDKLVCLVCNVKLPTLTKLTRHMSSHYAEYSCKLCDKSYLNEENLRIHIRFSHSEKYMCRKCMMMFSTLEEKKGHLKISTQCWGTMCSHCGERFPSWDQKQKHLVREHNITPITYTCPDCEKVFKSRYNLYHHYNTTHSESALMCSYCENKFKSQSVLDDHLIVHIGVKQFNCTVCSKAFSRFKALQDHMWTHSAIKKFQCRICDKSFCKRYSTLYPFRLRGKTLMCVYCCDEIEDPDEYRCHMDGTHKTVDLYTAFAHTKCRDRDYLKVDCINLKCRLCNHPFETVAEVAEHLSEHHDDKDIQDMDLNYEVGLHPYRLIKDKLFCLVCKMKQPTLTKLTRHMSSHYADYSCDACDKSYLNVESLRFHIKFSHSEKYICRKCTMEFSTSEERKEHLKRSSKCWGFVCVHCKERFSSWERKQKHLVSRHNVQALTYPCSDCGIMFKSRVCFYHHYNKTHSDLAHMCSYCGKKFGNKGLLDDHHLIHTREKHFQCTVCSKAFSRNKNLRDHMWTHSDKKRFPCMICEKTFSQKVSLNSHMKSVHPDAEYS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -