Basic Information

Insect: Philereme transversata
Gene Symbol: -
Assembly: GCA_963924445.1
Location: OZ004342.1:26331408-26337596[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 2.7e-05 0.0026 19.2 4.3 1 23 350 372 350 372 0.98

2 10 3.3e-05 0.0032 18.9 1.7 1 21 378 398 378 399 0.95

3 10 0.00024 0.023 16.2 4.3 2 23 408 429 407 429 0.96

4 10 0.00026 0.025 16.1 1.8 1 23 435 457 435 457 0.97

5 10 1.1e-06 0.00011 23.5 0.3 1 23 463 485 463 485 0.97

6 10 0.0001 0.01 17.4 1.0 1 21 491 511 491 513 0.94

7 10 0.00021 0.021 16.4 2.8 1 23 519 542 519 542 0.97

8 10 0.00016 0.015 16.8 0.3 1 23 548 570 548 570 0.98

9 10 3e-06 0.00029 22.2 2.8 1 23 576 598 576 598 0.98

10 10 4.1e-06 0.00041 21.7 2.0 1 22 604 625 604 625 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	2.7e-05	0.0026	19.2	4.3	1	23	350	372	350	372	0.98
2	10	3.3e-05	0.0032	18.9	1.7	1	21	378	398	378	399	0.95
3	10	0.00024	0.023	16.2	4.3	2	23	408	429	407	429	0.96
4	10	0.00026	0.025	16.1	1.8	1	23	435	457	435	457	0.97
5	10	1.1e-06	0.00011	23.5	0.3	1	23	463	485	463	485	0.97
6	10	0.0001	0.01	17.4	1.0	1	21	491	511	491	513	0.94
7	10	0.00021	0.021	16.4	2.8	1	23	519	542	519	542	0.97
8	10	0.00016	0.015	16.8	0.3	1	23	548	570	548	570	0.98
9	10	3e-06	0.00029	22.2	2.8	1	23	576	598	576	598	0.98
10	10	4.1e-06	0.00041	21.7	2.0	1	22	604	625	604	625	0.96

Sequence Information

Coding Sequence: ATGGCGCTGCTGAGCGCCTCGGTCTGTGACTTAACGAGAATGTTAGGCATTTGTGAAAAATATGCGCAATTTCATGGTCTACAATACAATGTAAAAAAGAGTGAATGCATGGTCTTTCAGGCCAGGGGTCACCAATGTCCGTCGCTAATACCTACCATCAAATTGTATGGTACGCCGCTGAAGCGAGTTGATCAATTTAAATACCTTGGACATTGGATAACCTCTGACCTGAAAGACGATGTAGACATTGAGAGGGAGAGGAGGGCGTTATCTGTAAGAGCAAACATGATTGCCCGCAGGTTTGCTCGTTGCTCCACGGATGTAAAAATCTGCCTATTCCGAGCCTACTGTACTAGCTtatacacgagcagcctgtgggttaaTTATACGCAAAAACAGTACAGCGCCCTACGCGTACAATACAACAACGCGTTCAGGGTGCTGGTTGGGCTGCCCCGGTTCTGCAGCGCATCGGGGATGTTCGCCGAGGCGCGAGTGGACTGCTTCTACAGTACCATGCGCAAGAggtgcacatccctggggcgcagaattcgggctagctccaacggtatactgagtacgttcgcaaacaggttcgactgtgagcatctaaaccattgttgtatgGTTAACATAGAAGACAAGATGCCTAAAACAATATGCTACATCTGTTACTCACTGCTGCAGAGGTTCCGTAGATTCTCTGACACAGCTCTCCGAACAGAAAAGTTGTTAAAAGAACAATTTAATAGTGGTGTTGGAACTGTACCTCACACTCTCCGACCCTGCCCAATGCTGAACTTAAGGATGATAAAAAACCTATCAGTTACAATTGCTCATTCAACATTAATAGAACAAAGCGAGATATCAACAGAAACTATACAAAGAAACTACATATGTATTAATGAAAATCCAACAATAAAGGTGGAGAGTGTTAAGGAAGAAAAAACtgaagacgatatcaaaattgAGAAAACTTTAGTTAAAATAGATGAATTCAACGCAGAGTCAAGATACAGCAGTGATTCCAACAACACAGATATATACTTCTATTGCGATGAATGTAACAAAAAATGTGCCACAAAAAACCAACTGCAAACACACTTAAGAAGCCACAACACAGAGAAGTCATTCACTTGTCGAaaatgcaataaatcatttcgAAGAATGAATAACTTAAAGCAACATGTCAAGGCCTGCACGACAGAAAAACCAGCACTGCCATGCCATCTGTGTTCAAAAACATTCATCGATAAAACCCGTCTTAACCATCACATCAAATCACACTCAGAAGAACGACCATTTATATGTGATCGATGCAGTAATAAGTTTAAAACTAGGACTCAACTGAAAACCCATATGGCAATTCACAGCGGAGAAAAGCCATTTGCATGTGAGTTATGCGGGAAAGCATTTATACAGATATCTAACTTCAGAACTCATATGAAAGTTCACGTCGGAGCCAAACCATTTGCCTGTGAAATCTGCGGTAAGGCATTTAACGCAAACGGTACCTTAAAATCTCATATGAAATGTCATACAAGAGAAAGGCCATTTATATGTAGCACATGTGGATTAACATTTGGTTTTAAATGTAGCTTAAAAACACATATACGGAGGATCCACACAGAGGTCAAAGCGTACGCTTGCAACCGCTGTCCTCTGTCGTTCAACCAGGAGATCCGTTTAACAGCGCACATGAGGAACCATACAGCTGAGAGGCCATTTTCCTGTGATAATTGCAATAAGACATTTACTACAGCTAGGAATTTGAAAGGTCATATGCACGTCCACTCTGGGGAACGACCTCATCCATGCAACAGATGTGGGAAGTCATTTAAGCGACCTGAACATGTTAGACAGCATATGAAGACTTCTAAGTGCAAAGCGGTCATAGTTTCTCAGGCAACTTGA
Protein Sequence: MALLSASVCDLTRMLGICEKYAQFHGLQYNVKKSECMVFQARGHQCPSLIPTIKLYGTPLKRVDQFKYLGHWITSDLKDDVDIERERRALSVRANMIARRFARCSTDVKICLFRAYCTSLYTSSLWVNYTQKQYSALRVQYNNAFRVLVGLPRFCSASGMFAEARVDCFYSTMRKRCTSLGRRIRASSNGILSTFANRFDCEHLNHCCMVNIEDKMPKTICYICYSLLQRFRRFSDTALRTEKLLKEQFNSGVGTVPHTLRPCPMLNLRMIKNLSVTIAHSTLIEQSEISTETIQRNYICINENPTIKVESVKEEKTEDDIKIEKTLVKIDEFNAESRYSSDSNNTDIYFYCDECNKKCATKNQLQTHLRSHNTEKSFTCRKCNKSFRRMNNLKQHVKACTTEKPALPCHLCSKTFIDKTRLNHHIKSHSEERPFICDRCSNKFKTRTQLKTHMAIHSGEKPFACELCGKAFIQISNFRTHMKVHVGAKPFACEICGKAFNANGTLKSHMKCHTRERPFICSTCGLTFGFKCSLKTHIRRIHTEVKAYACNRCPLSFNQEIRLTAHMRNHTAERPFSCDNCNKTFTTARNLKGHMHVHSGERPHPCNRCGKSFKRPEHVRQHMKTSKCKAVIVSQAT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -