Basic Information

Insect: Philereme transversata
Gene Symbol: -
Assembly: GCA_963924445.1
Location: OZ004342.1:24075014-24077224[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 3.1e-05 0.003 19.0 0.3 1 23 168 190 168 190 0.97

2 11 0.00011 0.011 17.2 1.0 6 23 203 220 203 220 0.99

3 11 7.5e-05 0.0074 17.8 1.3 1 23 253 275 253 275 0.97

4 11 0.00017 0.017 16.6 0.9 2 23 283 304 282 304 0.96

5 11 3.1e-05 0.0031 19.0 5.2 1 23 319 341 319 341 0.98

6 11 1.2e-05 0.0012 20.3 5.8 1 23 347 369 347 369 0.98

7 11 8.9e-06 0.00087 20.7 4.9 1 23 375 397 375 397 0.99

8 11 2.6e-05 0.0026 19.2 4.7 1 23 403 425 403 425 0.97

9 11 5.8e-05 0.0057 18.1 3.1 1 23 431 453 431 453 0.96

10 11 2.6e-06 0.00026 22.3 0.3 1 23 459 481 459 481 0.97

11 11 3.7e-05 0.0036 18.7 1.8 1 20 487 506 487 508 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	3.1e-05	0.003	19.0	0.3	1	23	168	190	168	190	0.97
2	11	0.00011	0.011	17.2	1.0	6	23	203	220	203	220	0.99
3	11	7.5e-05	0.0074	17.8	1.3	1	23	253	275	253	275	0.97
4	11	0.00017	0.017	16.6	0.9	2	23	283	304	282	304	0.96
5	11	3.1e-05	0.0031	19.0	5.2	1	23	319	341	319	341	0.98
6	11	1.2e-05	0.0012	20.3	5.8	1	23	347	369	347	369	0.98
7	11	8.9e-06	0.00087	20.7	4.9	1	23	375	397	375	397	0.99
8	11	2.6e-05	0.0026	19.2	4.7	1	23	403	425	403	425	0.97
9	11	5.8e-05	0.0057	18.1	3.1	1	23	431	453	431	453	0.96
10	11	2.6e-06	0.00026	22.3	0.3	1	23	459	481	459	481	0.97
11	11	3.7e-05	0.0036	18.7	1.8	1	20	487	506	487	508	0.93

Sequence Information

Coding Sequence: ATGTTTCAGCTGAACACGGAAGACGTGAGACCTAGCACTGTATGCTACATCTGTTACTGGCAGCTACAGAAGTGCTGCTTATTCTCGGATGTGGCACAACAATCTGAAAAACATCTGAGAGATTTGTTGCTAAATGGCACAGAAATCACACTCAGAATGATTATTGATCTGAACCTGGCAACAAAACCAAACCTCTCCATCACCAGTCCTAAGAGTATGTCTGTAGACGATGGTATCGATGAAAGCTCAGGGAGCCAGCCATCCCTCCCCACACGACACCGGCGCAGATTTACCACGAATGGAAGTACTGCTGTTACCGTGAAGGAAGAAAAAGTAACAGTGAAAGAAGAAAATGCCACTAAAGAAGAAGTACAAGTTGAAATTGAAAGATTAGACAATGTATCGGTAGACAAGTCCTCCATAGATCACCCTGAGGTTATCAATTTGAATGATTTAAAGACAAACCTAGACAATCAGAGTGTTCACGATCTGGGCAATCAGTTTCCTTGCAAGGAATGCGGAAAAGAATTCGCTATGATGAGATATCTGAAGCAGCACATGGTGGTACACTCCGAGGCGAGGCCGTTCACCTGCATACTGTCACCCTGTTCCAAAACCTTTGCCCGCAAGAGCGATCTCAACCGACATGTGAGAAATCATCCAGAACACAAACCCGATTACTGCGGCGGAGCCGGCGGCGGCGCGCAGGCGCAGCTGGAGAACGATTTGAAACTGGAAACTCACATAGAGAAGCCGTTCGCATGCACCAAGTGTGAAAAAAAGTTCACTTTGCAGCGATATCTACAGCAGCACCTGATCGTCCACACTCGGAAGAAGCCGCCGCTCAAATGCGTGACCTGCAACAAAGAGTTCTCTCGTAAGTTTTTATTAGACAGACACGCGGCCACTCACAGCAAGCCGCCGGTGCGCACGCGCCGCCCTGAGGACCGCCCCTACCACTGCGACATCTGCGGGAAGCAGTTCAAGATGAACAACCATCTGATATCGCACACGAGGCGACACACCGGCGAGCGCCCTTACTCCTGCCACCGCTGCGGGAAGACGTTCCGCTACGAGTGCAATCTGAGGATCCACATGAAGGCTCACAGCGGTCAAAAGCCATTCACCTGTCATGTGTGCCACAAACCATTCATGCTCAAGGGAAACCTCAAGCAGCACATGCAGACTCATACCGGAGAGAGGCCATTCCCCTGTAGCCTGTGCGACAAGAGGTTCACCCAGAAGTGCAGCTTGAAGCTTCACATGCAGTTTCATTCGGGAGAGAAGACCTTCGCTTGCAATATCTGCGACAAGAGATTCTTCAGGGTGTGTTACCTGAAGCGACACATGCTGGGGCACACGGGGGACCGGCCGTTCGCGTGCGACCGCTGCGACAAGGACTACACGGACCCCAGCACGTTGCGGATCCACCAGCGCGTGCACACCGGTGAGCGCCCCTACGCCTGCGACACCTGCGGGGCCACCTTCACGCGATCACACCATCTCAAGCAGCACACGAGCTCCGCTAGATGCAACGGCGTCGCATGA
Protein Sequence: MFQLNTEDVRPSTVCYICYWQLQKCCLFSDVAQQSEKHLRDLLLNGTEITLRMIIDLNLATKPNLSITSPKSMSVDDGIDESSGSQPSLPTRHRRRFTTNGSTAVTVKEEKVTVKEENATKEEVQVEIERLDNVSVDKSSIDHPEVINLNDLKTNLDNQSVHDLGNQFPCKECGKEFAMMRYLKQHMVVHSEARPFTCILSPCSKTFARKSDLNRHVRNHPEHKPDYCGGAGGGAQAQLENDLKLETHIEKPFACTKCEKKFTLQRYLQQHLIVHTRKKPPLKCVTCNKEFSRKFLLDRHAATHSKPPVRTRRPEDRPYHCDICGKQFKMNNHLISHTRRHTGERPYSCHRCGKTFRYECNLRIHMKAHSGQKPFTCHVCHKPFMLKGNLKQHMQTHTGERPFPCSLCDKRFTQKCSLKLHMQFHSGEKTFACNICDKRFFRVCYLKRHMLGHTGDRPFACDRCDKDYTDPSTLRIHQRVHTGERPYACDTCGATFTRSHHLKQHTSSARCNGVA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -