Basic Information

Insect: Philereme transversata
Gene Symbol: -
Assembly: GCA_963924445.1
Location: OZ004352.1:9208377-9224538[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0042 0.42 12.3 7.6 1 23 210 232 210 233 0.96

2 12 0.00053 0.052 15.1 0.4 1 23 241 263 241 263 0.96

3 12 1.1e-05 0.001 20.4 0.9 2 23 269 290 268 290 0.97

4 12 6.2e-06 0.00061 21.2 0.5 1 23 296 318 296 318 0.98

5 12 4.1e-07 4e-05 24.9 0.7 1 23 327 349 327 349 0.97

6 12 5.2e-05 0.0051 18.3 0.1 1 23 355 377 355 377 0.98

7 12 0.00069 0.068 14.7 7.2 1 23 383 405 383 405 0.98

8 12 1.1e-09 1.1e-07 32.9 0.7 1 23 411 433 411 433 0.99

9 12 0.00013 0.013 17.0 1.1 1 23 439 461 439 461 0.98

10 12 0.00069 0.068 14.7 1.2 1 23 467 488 467 488 0.93

11 12 0.0069 0.68 11.6 2.8 1 23 494 516 494 516 0.96

12 12 0.00089 0.087 14.4 0.3 1 22 522 543 522 543 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0042	0.42	12.3	7.6	1	23	210	232	210	233	0.96
2	12	0.00053	0.052	15.1	0.4	1	23	241	263	241	263	0.96
3	12	1.1e-05	0.001	20.4	0.9	2	23	269	290	268	290	0.97
4	12	6.2e-06	0.00061	21.2	0.5	1	23	296	318	296	318	0.98
5	12	4.1e-07	4e-05	24.9	0.7	1	23	327	349	327	349	0.97
6	12	5.2e-05	0.0051	18.3	0.1	1	23	355	377	355	377	0.98
7	12	0.00069	0.068	14.7	7.2	1	23	383	405	383	405	0.98
8	12	1.1e-09	1.1e-07	32.9	0.7	1	23	411	433	411	433	0.99
9	12	0.00013	0.013	17.0	1.1	1	23	439	461	439	461	0.98
10	12	0.00069	0.068	14.7	1.2	1	23	467	488	467	488	0.93
11	12	0.0069	0.68	11.6	2.8	1	23	494	516	494	516	0.96
12	12	0.00089	0.087	14.4	0.3	1	22	522	543	522	543	0.96

Sequence Information

Coding Sequence: ATGGAAACTGATGGAAGAATAAACACTGAAGACGATAAAGATAATCATGAAGAATTAGAGATTCCTCTCGCTTTACTCCAATATTTGAGCTCAGAAGAATGTAATTTACAAAACATTTGTCGAGTCTGTCTTTCGACTAGCAATGATGTGTTGTACCCAATTTCTGAAACTAAAGAATATAGTGATTTGGCCAAGATTTTCTATGCTATGACATCTATTCATGTAAATTTAGAAGATGATCTTCCAAGCAGCATATGTTCCAACTGCCAATCAGAAGTTGTTTATTATTACAAGTTCAGGACTAAATGTGAAAAAGCTGATTACATGCTGAAGTCCATCTTAAAAGGAGAATTCTCAATCAAAGAAGAACCAAAATCAGATGAAGTTGAAATTCTTATTGAAAAAGAGGATGTTAAATGTGAAGAAACACAAACACAACACACACACAAGACAGAATTCAATGATTACCCTGAAGATCTGAAGAGTGTTCTAAGTGAAGATGAAGCTTTATGTATAGTCcagaaaacattaaaaaatgaAAAGAAATTCACCATCTATGATAGagATTCAAGTACTCTACTGTCAGAAACGattgttaaaaaaactaaaagaaagaaaaactcTAAACATAAATGCTCTATTTGTTCCAAGGAATTTCATCAAATGAAACTGCTCAGAGCACATCAAAACAAACATCATTCCACCATTGTTAATGACCTATTCCCTTGCAAGGAATGCAAAGAAAGATTCAACTCTGAAAACGATCTCAAACTGCACAGCATTGTACACAGAAAAGGCCCATGGACATGCACTATTTGCGACAAACattttatagGGACAGCAGCGCTGCGTCGTCATATCCGGCGGCACATGGACTCGAAGCGGTTCACATGCGAGGCTTGCGGGAAAAGTTTCGTTGAGAAGTACGCGCTGAAGCGACACTCGCGTGTGCACACCGGCGAGCAGCTCGAGAAGAAACACGTCTGCCCTGACTGCGGCAAGAGGTTCATAGACAACGGTCAACTGATGTACCACATGTCGCGGCACAGCGGCCTGAAGCCGTTCCAGTGCGCGCTCTGCGACAAGGCGTTCCCTTCGCCGCGGCTGCTGGCGTCGCATCGCTTGATACACTCCGATCTTAAACCGTATCCCTGCAGTTACTGTGATAAGCGATTCCGCCACGACTCGTCACGCAATACTCATCACCGTACCCACACAGGGGAAAAACCCTACGTGTGCTCCATTTGCGGCAAAACATTCATACAGAATTCCAATTTGAGGCTGCATATGCGGACGCATACTGGTGAAAAGCCGTATGCATGTTCGCGCTGCGACAGCAAGTTCTCGTCGGGCTCCTCGCTCAAGAACCACGTGCGCACGCACACTGGGGAACGACCTTACAAATGCAAACTTTGTGGAAAGAGtttcGCTCGACTAAATGTGAAGTTGCACATGCGCCTGCATTCTGGCGAGAAGCCGTTCGCGTGCAGCGCCTGCCCCAAGCAGTACGTCAGCGCCTCGCATCTGCGCGACCACTGCCGGACACACACTGGTGAGAAACCATTCGAATGTGCCAAGTGCGAGTCCAAATTTTCCTCGAAAGCTCTCCTCATAAAGCATTTGAAGACCTTCGAAATCAACAAATCGAACAGAGAACACTGCAAAGACATGAATGTCCGAAAACGCCTACCAAAGAATAAGAATGACAAACCGGTTGATGAAATCCAAAAAGAAGTTGTAACAGTGCCGATGCAACAAATCGAGAGTGATATTCCAAACGCAATAGTTGAATTAACTCTCGGCACACACGAGACCTTCGATGTAAGCCAAGAGCTCGTGTATCAAGACAGTAATGTTAAGACTCATGTTATTGTACTAGGAAGCAGTAATACAGTCAGTTATGTGAGCAACGATGCCGGAAGTGCCAGCGGCCTCAATATTGTCACTGTTAATGAGATTGGAGTCAGTATGTCTGCAACAAATGCTAATTTTTAA
Protein Sequence: METDGRINTEDDKDNHEELEIPLALLQYLSSEECNLQNICRVCLSTSNDVLYPISETKEYSDLAKIFYAMTSIHVNLEDDLPSSICSNCQSEVVYYYKFRTKCEKADYMLKSILKGEFSIKEEPKSDEVEILIEKEDVKCEETQTQHTHKTEFNDYPEDLKSVLSEDEALCIVQKTLKNEKKFTIYDRDSSTLLSETIVKKTKRKKNSKHKCSICSKEFHQMKLLRAHQNKHHSTIVNDLFPCKECKERFNSENDLKLHSIVHRKGPWTCTICDKHFIGTAALRRHIRRHMDSKRFTCEACGKSFVEKYALKRHSRVHTGEQLEKKHVCPDCGKRFIDNGQLMYHMSRHSGLKPFQCALCDKAFPSPRLLASHRLIHSDLKPYPCSYCDKRFRHDSSRNTHHRTHTGEKPYVCSICGKTFIQNSNLRLHMRTHTGEKPYACSRCDSKFSSGSSLKNHVRTHTGERPYKCKLCGKSFARLNVKLHMRLHSGEKPFACSACPKQYVSASHLRDHCRTHTGEKPFECAKCESKFSSKALLIKHLKTFEINKSNREHCKDMNVRKRLPKNKNDKPVDEIQKEVVTVPMQQIESDIPNAIVELTLGTHETFDVSQELVYQDSNVKTHVIVLGSSNTVSYVSNDAGSASGLNIVTVNEIGVSMSATNANF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -