Ptra007848.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Philereme transversata
Gene Symbol
-
Assembly
GCA_963924445.1
Location
OZ004340.1:14461804-14464290[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.9e-07 4.8e-05 24.1 0.0 1 38 16 52 16 56 0.96

Sequence Information

Coding Sequence
ATGAAACCAAAGGcagtaaaaaaaccaaataaaagaaaaaaatacacaaacgaGAATCTACTACAAGCCTTGGATGCAGTAAAAAAGGGTATGTCCAAAAAACTGGCCTCGAAAACTTTCAGTGTACCTAGAGGAACTATCCAGTCACGATTAAGAAAGCCGTGCAAGAGTCTACCAGGCCCTGATCCAATATTGTCGAACGAAGAGGAAGGAGTTTTAGTACAGTGGGTTGTAGATTGCTGTCGGAAAGGATTCCCAAAAAGAAAGTCTGATTTACAATTGAGTGTAGCAAATTTCTTAAAGAAGGCAGGAAGAGATAACCCCTTTAAAGATGGCATACCTGGTAAAAAATGGTATGACCTTTTTATGCGTCGTCATCCAGAACTCAGCGAACGCACTGCCGAAGCTGTAACATCAGCCAGTGCTAATGTATCAGAAAAAGACATCAAAGGGTGGTTCCACAAAATTGAGCTTTATCTTGAAGAAAACAACTACTTTGACATCTTACAGGACCCGTCTCGTGTTTTTAATGGGGATGAATCTAACTTTCAGTTATGCCCCAAAAGTGGCAAAGTTATTGCATTACGAGGAGAAAAAGACGTGTATGAAGTTGATCACGCTGCAGCTAAAACAGCCCTTACTGTACTGTTTACGTTTTGCGCCAACGGAGATATTACACCTCCACTAGTTGTGTTTCCCAACAAGAGGCTTCCCAAGGATATAACTTCATCAGTTCCAAATGAGTGGGGCATTGGTTTGAGCGATACTGGCTGGATGAAATCTGAACTTTTCTATGATTATATCAAGAATGTATTTCATCCATACCTTCTCAAAAGAAAAGTAACATTTCCCGTCATACTGTTTGTAGATGGGCACAAAACACATCTTAGTCTTGAAGTGAGTGAATTGTGCAGCAAGTTGGAGATCGTTTTGATTGCTTTATACCCCAACGCCACACGGATACTACAGCCAGCCGACGTGTCAGCCTTTAGACCTCTCAAAAATGCATGGAAGGAAAGTGTCCTGAAATGGAGGAGAGATCACCCTTTGGAGACTCTcacaaaaaacaattttgtacCTGTGCTTAAGGAGGCTTTAGAGGTTGGCGTCAAAGATACAACGGTGATAAATGGATTCAGGACTACAGGCTTATGTCCCTGGAACTCTGAAGCTATCAACTACAAAAAATGTCTGGGTAAAGGAAGCAAACATGATGAAGAACCAAAAGAAGACGAATCAAAACTACAAGAAAATTCTAATAAAGATAGAGTTATGACACATGAAACTTTAAAAAAGATTGTAGGGCAAGAAAAAATTACATTTCTGCAAAGAACGCCGTTCGAAAGTCTACCAGAAACAGAAAGTGTTTTGAAAAAGATTTGTTGTTATTTTGAAAATCATCCAACTGATGCGTCCACATCCCCAGAAGCTGTTGTTGAGATTGAAAATTACGAAGTAGTTGAATTTCTCAATATCGATCAATTTCCAGTAATGTTAGCAGAAGATTGTGTAGATGAAATGCGAGCTATGAACACTGCGATAACGAATGAACCATCTgaaaaaaatactgaaaattGTCTTGGAAGTGCGCAATTGGTACGTCTTGATAGTCAACAATATTTACTAACTCCAGTCAAATTACAGGACGTATTGGTTACGGAAAAAACGCCTGAAAGAAAAGGTGTTAAAAATGTAGAGAGATCATCCTTCGTTCTTACATCAGCTGAATGGCAGAAGACTGAAAACGACAAATTAAAAGCTAAACAACTTAAAGAAGAAGAACAGGAGACTCGTAAGAAGGAAAGATTACTGAAAcaagaagaaaaaaataaagCGAAAGAAGAAAGCACCCGAAATAAGATAAACAAAAAAGCAAAAGTGACATTAGCTATCAAAAAACAAGagacaaaagaaaacaaactactagtaacaaatgaaaacaaaataaaagagaCAAAAGCTTACAAAATACAAGAAACAAAAGCTAACAAAATACAAGAGACAAGAGAAAACCAACTACAAGTGACAaatgaaaaccaaataaaagaGACAAAAGCTAGCAAAATACAAGAGACAAAAGCTTACAAAATACAAGagacaaaagaaaacaaactacaagtgaaaaatgaaaacaaaatacaaGAGACAAAAGCTAACAAAACACAAGAGACATTTATAAATCACCACCATGTAGTTATTAATCACCAAGTTATGATTCATGATAACAATATGCCATCCTCTCCTGAAAATGAACACCTGTCTAACACTAAGAAAAGAAAAACTGAAGAGCAGCCTATGTTTCCACCAAATAAAAGAATCCAAATTCTTTCAGACGTTAAACTGAATTCACCAAACGTATCCAGAACTATGCAAGTTGGTCAAAGAGATGACAACCAAATTAGTGACCCACTGGACAAAATAATCAACAATAAAAGAAAGAAGACTTACTCTTTACTAGAACTAGAGAAGGTACTTTCCGAGGATTAG
Protein Sequence
MKPKAVKKPNKRKKYTNENLLQALDAVKKGMSKKLASKTFSVPRGTIQSRLRKPCKSLPGPDPILSNEEEGVLVQWVVDCCRKGFPKRKSDLQLSVANFLKKAGRDNPFKDGIPGKKWYDLFMRRHPELSERTAEAVTSASANVSEKDIKGWFHKIELYLEENNYFDILQDPSRVFNGDESNFQLCPKSGKVIALRGEKDVYEVDHAAAKTALTVLFTFCANGDITPPLVVFPNKRLPKDITSSVPNEWGIGLSDTGWMKSELFYDYIKNVFHPYLLKRKVTFPVILFVDGHKTHLSLEVSELCSKLEIVLIALYPNATRILQPADVSAFRPLKNAWKESVLKWRRDHPLETLTKNNFVPVLKEALEVGVKDTTVINGFRTTGLCPWNSEAINYKKCLGKGSKHDEEPKEDESKLQENSNKDRVMTHETLKKIVGQEKITFLQRTPFESLPETESVLKKICCYFENHPTDASTSPEAVVEIENYEVVEFLNIDQFPVMLAEDCVDEMRAMNTAITNEPSEKNTENCLGSAQLVRLDSQQYLLTPVKLQDVLVTEKTPERKGVKNVERSSFVLTSAEWQKTENDKLKAKQLKEEEQETRKKERLLKQEEKNKAKEESTRNKINKKAKVTLAIKKQETKENKLLVTNENKIKETKAYKIQETKANKIQETRENQLQVTNENQIKETKASKIQETKAYKIQETKENKLQVKNENKIQETKANKTQETFINHHHVVINHQVMIHDNNMPSSPENEHLSNTKKRKTEEQPMFPPNKRIQILSDVKLNSPNVSRTMQVGQRDDNQISDPLDKIINNKRKKTYSLLELEKVLSED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00704949;
90% Identity
iTF_01182787; iTF_01182790;
80% Identity
iTF_01182787;