Ptra009990.1
Basic Information
- Insect
- Philereme transversata
- Gene Symbol
- -
- Assembly
- GCA_963924445.1
- Location
- OZ004341.1:19238589-19240565[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.6e-07 2.7e-05 24.9 0.1 18 41 30 53 19 57 0.85
Sequence Information
- Coding Sequence
- ATGGTTAATACGTATAAAAGAAAGTCCCAACGTGGATCGTGGTCTTCAGAAACCCTAGCGCAGGCCATGGTGGAAGCAAAAAGTTCGTCTATACGCCAAGCTTCTCTCAAATATGGTATTCCGTATGGCACCTTACATAGACATCTTCAATCCAATTGTACTGAGAAAAAATTGGGTAGATTTCGTCCCGTGTTTACTCCGGACGAAGAAAAGCTATTGACGGAATACATTCAGAAAGTAGATTCTCTGTTTTACGGTCTGACGAGGATAGAGTTTATGCAGCTAGCAGGACAGTTTGCTAAAGCCAAAAATAAGGAAACTAGATTTAAAGATGATGTTGCTGGTAAATCCTGGTTCAAATCGTTTCAAAAAAGAAACCCAACAATTGTACTGCGAAGACCGGAGCCTACATCAATTGCAAGAATAAAAGGGTTCAACAAGCATCAAGTGAACCGCTTTTATGATCTCTTAGAAGAacagatgataaataataatattgagcCATCCAGAGTCTATAATATGGACGAAACCGGGGTTAAGACTTCGACGTCGAGGCCTCCAAAGATTTTGACTACACAAGGAAAAAAACAGGTCGGCATTGTATCTAGTCTGGAAAGAGGTGTGCTTACAACTGTAATATGTTGCTGCAATGCTGCAGGGTCCTTCATAcctcccttttttatttttaaacgaaaaAAATTCATTGCTCGTCTGCTTGATGGATCTCCTCCTGGATCACAAGCTTCTGTAACAGACAGTGGCTGGATTAACGGTGAGAAGTTTTTTGACTGGCTACGATATTTTGTCGAACAAGTGCGACCATCGCCAGAAAAAAAGGTCCTTTTATTACTCGACAACCACGAGTCGCACAAGTTCTATCCAGCACTTGAATATGCccgaaaaaataatattatcctGTTGTCCTTTCCGCCGCACACTACGCACCGTCTGCAGCCCTTGGACGTGGCTGTATATGGTCCCATTAAGACTTTCTTTGAACAAGAAATCAATacttttcaaaaacattttccCGGCCGTATAATAAACCAACTAGACATCTGCAGACTGTTTTGTCCAGCCTATCTCAAAGGAGCAACGGCATTGAACGCCATAAAAGGATTCGAGGCAAGTGGGATTTGTCCTTATAACAGGAATATTTTTGGAGATGAAATGTTCGCAGCAGCTTCATTGGCTCCTCCAGAACCAGATGCTAATGATCAGTTAGATTCTCCTTCAGCATCATCATCTATTATAATTCCAATCCAAGAACCTACACAATGTACTCGCTCGGAATCAAATACCTGCTCAACGGACGAACTCTCAACATCATTATCCAATTTAATTCCAGCTCCAGAACCTAGGCAGTGTACTCCTCCCTCGTCATCTCTACCTACTGGTTCTTCTAAATCAGTAAATCAACATTTACCAAATCGTAATAAGCAATCAGAGGTTACCGAGACACGACAGGCAAGTTTTATAGCAGAAAAACAAATCACACCGGCCCATATCAGACCTATACCTCGAGAAACTAGACAAAACATTACAAAACGGAAAAGGAAGATACAAAAAGCAGAAATCCTCACCAGCACGCCGATCAAAGATGAGCAGTTGAATAAATTGACAAAAAGCCTGGCAaagaacataaaacaaaaaaaaaagaagcctAAGTTAGCATTAGATTCGACAGGTTCCATTCAGAAAAAAAAGAAGGCTCCATCCACACATGCCTCGGACAAACCTTCGACATCCAAGCAAGGAAAAAACGAGAAGAGCCTTAGAACTAACCAGAAAACTTCGCCCAAGAAAATCTCCGATCAGCCTGAGTCTGCTTATTTCTGTACAGTCTGCAAGGAACTCTACAAGACACCTATAGTTGAAGACTGGATAGAATGCTCAGGATGCCACAATTGGACACACGAGCTCTGCTCCTCCTATCTAGGTTTTGGCTCATACTTTTGCGATGAGTGTGATGACTAG
- Protein Sequence
- MVNTYKRKSQRGSWSSETLAQAMVEAKSSSIRQASLKYGIPYGTLHRHLQSNCTEKKLGRFRPVFTPDEEKLLTEYIQKVDSLFYGLTRIEFMQLAGQFAKAKNKETRFKDDVAGKSWFKSFQKRNPTIVLRRPEPTSIARIKGFNKHQVNRFYDLLEEQMINNNIEPSRVYNMDETGVKTSTSRPPKILTTQGKKQVGIVSSLERGVLTTVICCCNAAGSFIPPFFIFKRKKFIARLLDGSPPGSQASVTDSGWINGEKFFDWLRYFVEQVRPSPEKKVLLLLDNHESHKFYPALEYARKNNIILLSFPPHTTHRLQPLDVAVYGPIKTFFEQEINTFQKHFPGRIINQLDICRLFCPAYLKGATALNAIKGFEASGICPYNRNIFGDEMFAAASLAPPEPDANDQLDSPSASSSIIIPIQEPTQCTRSESNTCSTDELSTSLSNLIPAPEPRQCTPPSSSLPTGSSKSVNQHLPNRNKQSEVTETRQASFIAEKQITPAHIRPIPRETRQNITKRKRKIQKAEILTSTPIKDEQLNKLTKSLAKNIKQKKKKPKLALDSTGSIQKKKKAPSTHASDKPSTSKQGKNEKSLRTNQKTSPKKISDQPESAYFCTVCKELYKTPIVEDWIECSGCHNWTHELCSSYLGFGSYFCDECDD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00032859;
- 90% Identity
- iTF_01182754; iTF_01182779;
- 80% Identity
- -