Ptra028246.1
Basic Information
- Insect
- Philereme transversata
- Gene Symbol
- -
- Assembly
- GCA_963924445.1
- Location
- OZ004351.1:21735240-21743543[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.9e-08 9.7e-06 26.3 0.0 2 40 16 55 15 59 0.87
Sequence Information
- Coding Sequence
- ATGGTTAGCCATTATAGAAGAAAAACGACAAGAGCAGCATATTCGAAAGAAAATCTAAAAGCTGCAGTTGAATCAGTCAGAAATAGGTCTTTAAGTGGATATATGGCTGCAAAAAAATACGGAATCCCTAGAATGACCATAATGGATCATGTCTGTAATAGAAGAACTAAATCAAACACTTTAGGAAGAAGCACTGCATTGTCGGAAGAAGTAGAAAATAAATTGGCTATATCTCTACACCTTATGGAAAAACATGGTTTTGGATTAACCAAAGCGGAAGTATTGGAAACTGTAGCAGAGTATGTAAACAAGAACAACATTTTGACAGCATTTAAAAATGGCAAACCAGGTAGTTCCTGGTTCACTGGTTTCAAAAAACGGCATAACCTTTCAGTCAAAAAACCTCAAGCTGTTGAATACTCCAGAAAAAAAGCAATAAACCCGTTTATCGTATTCCCGTATTTCAAATTAGTCGAGGagacattaaaaaaactgaagCTACTAGAAAAACCATCCGCAATATGGAATATGGATGAGACCAGCTTTTCCAGGGACCCTGCAAAAACTAGAATTGTAGGAGTCAAAGGGCACGCCGCAACTCGAGTCATTTCTTCGCCAGGAAAAGAAAATACAACAGTATTACTAGGAGCTAATGCACAAGGAGACAAACTACCACCGCTTATAATATACAAAGGAAAACACATGTGGGACACATGGGTGTCCCCTGACGCTTACCCTGGCACAACTTACGCAGCTACTAAAAACGGGTGGATGGAGAGTGATGTTTTTGAAACTTATTTCAAGAAATCTTTCTTGCCCGCAATTGGGGAAGAACGTCCAGTTCTGCTCATTTACGATGGCCACTCGACCCACGTTGGGTTAAATATAATAGAGGAAGCTCGAAAAGCCAATGTAACTATACTGAAACTACCGGCACATACTAGTCACGTCTTACAGCCGCTTGACTTGGCAGTAATGAAACCATTTAAAGATCGTTGGGATCAATTACTTGTACAATGGCAGCGGTTGAATGTTGGAGCAACATTGTCAAAAAGAGAATTCTCGAGGCTCATTGGATTAGTTTGGGCTCAAATCGATAAACAAGTTGTAATCAATGGTTTCCGCAAAGCCGGAATTTTCCCTTTCAATCCCGAAGTTGTTGAAGAGAAGCTTTATGACTCGTTGCAACTTAAACAATGGAAAGATCTTCGGAGGGAGTACCAAAATAACAACAATATTTTAGAAGAACATGAGGATGAAAGGCGCACACCGAGAACTTTACTCTCATTAGCCCTTGATTGCGTTACAAGAGAAGGTCGTAAAGCAACCCATGAAGGATATGATGACCaacagtatttttatatttgcgaTGAAAGTTTACGTAAACCTGACGCCCTAAAGACTGAAATTAGACTGCATAGTAAAAAACCCTCCAGTTATAATGTACCTGAATCAAATAAAGAATATGTTTCAAATGACACTAAAAAGATCCAAATATTAGAGAATAGAATCGTTTCTTTCGAAGAACTTCTTTTAATGAAGATTAAAACAGGAAACAACGCAAAACTAAAGCGACACAAATTAGGGCCTGGAGCTGAAATAATAACACATGATGAAGTTGTTAAGCGTAAGACAGcggaagaaaaaataaaaaatctgaaaaaagaaCCTaagactattaaaataaaaaaagaaaaaggcaCTAATTCATCGGAACCCATACCTGGTCCGTcagTATTGCTAAAGCAATCAACTAATGACCACAATATATTCGAAGTCACGACGCTGTCTCCAGAGCATCAGTGTCCCGTCTCTACTGTAAATAGCGTAAATCAATCCGTCGGCTTGACATTGGCGCAGCCCCATGCTGACGTCACGATAAATATCAGTTCAGATACCTAG
- Protein Sequence
- MVSHYRRKTTRAAYSKENLKAAVESVRNRSLSGYMAAKKYGIPRMTIMDHVCNRRTKSNTLGRSTALSEEVENKLAISLHLMEKHGFGLTKAEVLETVAEYVNKNNILTAFKNGKPGSSWFTGFKKRHNLSVKKPQAVEYSRKKAINPFIVFPYFKLVEETLKKLKLLEKPSAIWNMDETSFSRDPAKTRIVGVKGHAATRVISSPGKENTTVLLGANAQGDKLPPLIIYKGKHMWDTWVSPDAYPGTTYAATKNGWMESDVFETYFKKSFLPAIGEERPVLLIYDGHSTHVGLNIIEEARKANVTILKLPAHTSHVLQPLDLAVMKPFKDRWDQLLVQWQRLNVGATLSKREFSRLIGLVWAQIDKQVVINGFRKAGIFPFNPEVVEEKLYDSLQLKQWKDLRREYQNNNNILEEHEDERRTPRTLLSLALDCVTREGRKATHEGYDDQQYFYICDESLRKPDALKTEIRLHSKKPSSYNVPESNKEYVSNDTKKIQILENRIVSFEELLLMKIKTGNNAKLKRHKLGPGAEIITHDEVVKRKTAEEKIKNLKKEPKTIKIKKEKGTNSSEPIPGPSVLLKQSTNDHNIFEVTTLSPEHQCPVSTVNSVNQSVGLTLAQPHADVTINISSDT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01182657; iTF_01182660; iTF_01182662; iTF_01507127; iTF_01507129; iTF_01182659; iTF_01182661; iTF_01182668; iTF_01182664; iTF_01182669; iTF_00261781;
- 90% Identity
- iTF_01182657;
- 80% Identity
- -